RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 USP48Q86UV5 1035 aa15.13■□□□□ 0.01
CTC1-203ENST00000578240 HOMER1Q86YM7 354 aa15.13■□□□□ 0.01
CTC1-203ENST00000578240 SCYL3Q8IZE3 742 aa15.13■□□□□ 0.01
CTC1-203ENST00000578240 DCPSQ96C86 337 aaKnown RBP15.13■□□□□ 0.01
CTC1-203ENST00000578240 VCPKMTQ9H867 229 aa15.13■□□□□ 0.01
CTC1-203ENST00000578240 BARHL2Q9NY43 387 aa15.13■□□□□ 0.01
CTC1-203ENST00000578240 TFIP11Q9UBB9 837 aaKnown RBP15.13■□□□□ 0.01
CTC1-203ENST00000578240 USP17L10C9JJH3 530 aa15.12■□□□□ 0.01
CTC1-203ENST00000578240 M0R2N6 131 aa15.12■□□□□ 0.01
CTC1-203ENST00000578240 PRPF40AO75400 957 aaKnown RBP15.12■□□□□ 0.01
CTC1-203ENST00000578240 USP2O75604 605 aaPredicted RBP15.12■□□□□ 0.01
CTC1-203ENST00000578240 NCLP19338 710 aaKnown RBP15.12■□□□□ 0.01
CTC1-203ENST00000578240 KRT85P78386 507 aa15.12■□□□□ 0.01
CTC1-203ENST00000578240 TRIM29Q14134 588 aa15.12■□□□□ 0.01
CTC1-203ENST00000578240 ZYXQ15942 572 aaKnown RBP15.12■□□□□ 0.01
CTC1-203ENST00000578240 NOL9Q5SY16 702 aaKnown RBP15.12■□□□□ 0.01
CTC1-203ENST00000578240 KRT26Q7Z3Y9 468 aa15.12■□□□□ 0.01
CTC1-203ENST00000578240 PNMA8AQ86V59 439 aaPredicted RBP15.12■□□□□ 0.01
CTC1-203ENST00000578240 NOSTRINQ8IVI9 506 aa15.12■□□□□ 0.01
CTC1-203ENST00000578240 GPT2Q8TD30 523 aa15.12■□□□□ 0.01
CTC1-203ENST00000578240 ZC3H15Q8WU90 426 aaKnown RBP15.12■□□□□ 0.01
CTC1-203ENST00000578240 FOXP1Q9H334 677 aaPredicted RBP15.12■□□□□ 0.01
CTC1-203ENST00000578240 ELP1O95163 1332 aa15.12■□□□□ 0.01
CTC1-203ENST00000578240 RAD21O60216 631 aa15.12■□□□□ 0.01
CTC1-203ENST00000578240 BTNL9Q6UXG8 535 aa15.12■□□□□ 0.01
CTC1-203ENST00000578240 HEATR3Q7Z4Q2 680 aa15.12■□□□□ 0.01
CTC1-203ENST00000578240 SULF1Q8IWU6 871 aa15.12■□□□□ 0.01
CTC1-203ENST00000578240 LEO1Q8WVC0 666 aaPredicted RBP15.12■□□□□ 0.01
CTC1-203ENST00000578240 HOOK2Q96ED9 719 aa15.12■□□□□ 0.01
CTC1-203ENST00000578240 RRP36Q96EU6 259 aaKnown RBP15.12■□□□□ 0.01
CTC1-203ENST00000578240 CDCA5Q96FF9 252 aa15.12■□□□□ 0.01
CTC1-203ENST00000578240 ANP32EQ9BTT0 268 aa15.12■□□□□ 0.01
CTC1-203ENST00000578240 VAT1LQ9HCJ6 419 aa15.12■□□□□ 0.01
CTC1-203ENST00000578240 SH3GLB2Q9NR46 395 aa15.12■□□□□ 0.01
CTC1-203ENST00000578240 GINM1Q9NU53 330 aa15.12■□□□□ 0.01
CTC1-203ENST00000578240 CLEC11AQ9Y240 323 aa15.12■□□□□ 0.01
CTC1-203ENST00000578240 GOLGA6L22H0YM25 854 aa15.11■□□□□ 0.01
CTC1-203ENST00000578240 WNT7AO00755 349 aa15.11■□□□□ 0.01
CTC1-203ENST00000578240 BMP3P12645 472 aa15.11■□□□□ 0.01
CTC1-203ENST00000578240 PTPRAP18433 802 aa15.11■□□□□ 0.01
CTC1-203ENST00000578240 TOB1P50616 345 aaPredicted RBP15.11■□□□□ 0.01
CTC1-203ENST00000578240 HTRA3P83110 453 aa15.11■□□□□ 0.01
CTC1-203ENST00000578240 FAM83BQ5T0W9 1011 aa15.11■□□□□ 0.01
CTC1-203ENST00000578240 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.11■□□□□ 0.01
CTC1-203ENST00000578240 GOPCQ9HD26 462 aa15.11■□□□□ 0.01
CTC1-203ENST00000578240 SNCAIPQ9Y6H5 919 aa15.11■□□□□ 0.01
CTC1-203ENST00000578240 SUPT20HL1Q3ZLR7 823 aa15.1■□□□□ 0.01
CTC1-203ENST00000578240 DAGLBQ8NCG7 672 aa15.1■□□□□ 0.01
CTC1-203ENST00000578240 KIAA1683Q9H0B3 1180 aa15.1■□□□□ 0.01
CTC1-203ENST00000578240 CLIC4Q9Y696 253 aa15.1■□□□□ 0.01
CTC1-203ENST00000578240 TMEM232C9JQI7 657 aa15.09■□□□□ 0.01
CTC1-203ENST00000578240 ZBTB5O15062 677 aa15.09■□□□□ 0.01
CTC1-203ENST00000578240 TRAK2O60296 914 aa15.09■□□□□ 0.01
CTC1-203ENST00000578240 TAL1P17542 331 aaPredicted RBP15.09■□□□□ 0.01
CTC1-203ENST00000578240 KRT2P35908 639 aa15.09■□□□□ 0.01
CTC1-203ENST00000578240 NASPP49321 788 aaPredicted RBP15.09■□□□□ 0.01
CTC1-203ENST00000578240 PRKG1Q13976 671 aa15.09■□□□□ 0.01
CTC1-203ENST00000578240 VGLL4Q14135 290 aa15.09■□□□□ 0.01
CTC1-203ENST00000578240 QRICH1Q2TAL8 776 aa15.09■□□□□ 0.01
CTC1-203ENST00000578240 DNAJC5GQ8N7S2 189 aa15.09■□□□□ 0.01
CTC1-203ENST00000578240 PGBD1Q96JS3 809 aa15.09■□□□□ 0.01
CTC1-203ENST00000578240 ZMYND12Q9H0C1 365 aa15.09■□□□□ 0.01
CTC1-203ENST00000578240 SH2D4AQ9H788 454 aa15.09■□□□□ 0.01
CTC1-203ENST00000578240 POLR3EQ9NVU0 708 aa15.09■□□□□ 0.01
CTC1-203ENST00000578240 PNMA6FA0A0J9YX94 578 aa15.09■□□□□ 0.01
CTC1-203ENST00000578240 XBP1P17861 261 aa15.09■□□□□ 0.01
CTC1-203ENST00000578240 CEBPZQ03701 1054 aaKnown RBP15.09■□□□□ 0.01
CTC1-203ENST00000578240 MTMR2Q13614 643 aa15.09■□□□□ 0.01
CTC1-203ENST00000578240 CDC37Q16543 378 aaPredicted RBP15.09■□□□□ 0.01
CTC1-203ENST00000578240 SYDE2Q5VT97 1194 aa15.09■□□□□ 0.01
CTC1-203ENST00000578240 MOB2Q70IA6 237 aa15.09■□□□□ 0.01
CTC1-203ENST00000578240 RASGRP4Q8TDF6 673 aa15.09■□□□□ 0.01
CTC1-203ENST00000578240 COA7Q96BR5 231 aa15.09■□□□□ 0.01
CTC1-203ENST00000578240 WDR18Q9BV38 432 aa15.09■□□□□ 0.01
CTC1-203ENST00000578240 FBXO28Q9NVF7 368 aa15.09■□□□□ 0.01
CTC1-203ENST00000578240 RTEL1Q9NZ71 1219 aa15.09■□□□□ 0.01
CTC1-203ENST00000578240 SEC63Q9UGP8 760 aaKnown RBP15.09■□□□□ 0.01
CTC1-203ENST00000578240 PCDHA4Q9UN74 947 aa15.09■□□□□ 0.01
CTC1-203ENST00000578240 ESYT2A0FGR8 921 aa15.08■□□□□ 0
CTC1-203ENST00000578240 hCG_1984214I3L0E3 225 aa15.08■□□□□ 0
CTC1-203ENST00000578240 SNAP25P60880 206 aa15.08■□□□□ 0
CTC1-203ENST00000578240 FMR1Q06787 632 aaKnown RBP eCLIP15.08■□□□□ 0
CTC1-203ENST00000578240 PTPAQ15257 358 aa15.08■□□□□ 0
CTC1-203ENST00000578240 SAFBQ15424 915 aaKnown RBP eCLIP15.08■□□□□ 0
CTC1-203ENST00000578240 KLHL40Q2TBA0 621 aa15.08■□□□□ 0
CTC1-203ENST00000578240 ATL3Q6DD88 541 aa15.08■□□□□ 0
CTC1-203ENST00000578240 FAM177A1Q8N128 213 aaPredicted RBP15.08■□□□□ 0
CTC1-203ENST00000578240 ZNF713Q8N859 430 aaPredicted RBP15.08■□□□□ 0
CTC1-203ENST00000578240 CCDC148Q8NFR7 591 aa15.08■□□□□ 0
CTC1-203ENST00000578240 SPATA32Q96LK8 384 aa15.08■□□□□ 0
CTC1-203ENST00000578240 FEZ1Q99689 392 aa15.08■□□□□ 0
CTC1-203ENST00000578240 SCAND2PQ9GZW5 306 aaPredicted RBP15.08■□□□□ 0
CTC1-203ENST00000578240 EMILIN3Q9NT22 766 aa15.08■□□□□ 0
CTC1-203ENST00000578240 RCOR1Q9UKL0 485 aa15.08■□□□□ 0
CTC1-203ENST00000578240 PRR12Q9ULL5 1215 aa15.08■□□□□ 0
CTC1-203ENST00000578240 ISY1Q9ULR0 285 aaKnown RBP15.08■□□□□ 0
CTC1-203ENST00000578240 VCAM1P19320 739 aa15.07■□□□□ 0
CTC1-203ENST00000578240 PTMSP20962 102 aa15.07■□□□□ 0
CTC1-203ENST00000578240 STAT2P52630 851 aa15.07■□□□□ 0
CTC1-203ENST00000578240 NAPAP54920 295 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms