RNA–Protein interactions for RNA: ENST00000578218.5

THRA-208, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 4

Gene THRA, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-208ENST00000578218 PHF24Q9UPV7 400 aa29.77■■■□□ 2.36
THRA-208ENST00000578218 DLL1O00548 723 aa29.76■■■□□ 2.35
THRA-208ENST00000578218 BADQ92934 168 aa29.76■■■□□ 2.35
THRA-208ENST00000578218 KIFC2Q96AC6 838 aa29.76■■■□□ 2.35
THRA-208ENST00000578218 DDX11Q96FC9 970 aa29.76■■■□□ 2.35
THRA-208ENST00000578218 IGKV6D-41A0A0C4DH26 115 aa29.75■■■□□ 2.35
THRA-208ENST00000578218 ZBED4O75132 1171 aa29.75■■■□□ 2.35
THRA-208ENST00000578218 ZNF865P0CJ78 1059 aaPredicted RBP29.75■■■□□ 2.35
THRA-208ENST00000578218 C1orf53Q5VUE5 145 aa29.75■■■□□ 2.35
THRA-208ENST00000578218 CPXCR1Q8N123 301 aa29.75■■■□□ 2.35
THRA-208ENST00000578218 LRRC47Q8N1G4 583 aaKnown RBP29.75■■■□□ 2.35
THRA-208ENST00000578218 CEP95Q96GE4 821 aa29.75■■■□□ 2.35
THRA-208ENST00000578218 NACAP1Q9BZK3 213 aa29.75■■■□□ 2.35
THRA-208ENST00000578218 TTC41PQ6P2S7 1318 aa29.74■■■□□ 2.35
THRA-208ENST00000578218 ERC2O15083 957 aa29.74■■■□□ 2.35
THRA-208ENST00000578218 MSL3Q8N5Y2 521 aaKnown RBP29.74■■■□□ 2.35
THRA-208ENST00000578218 FSD1Q9BTV5 496 aa29.74■■■□□ 2.35
THRA-208ENST00000578218 ZHX1Q9UKY1 873 aaPredicted RBP29.74■■■□□ 2.35
THRA-208ENST00000578218 ISY1Q9ULR0 285 aaKnown RBP29.74■■■□□ 2.35
THRA-208ENST00000578218 PLIN4Q96Q06 1357 aa29.74■■■□□ 2.35
THRA-208ENST00000578218 SYNGAP1Q96PV0 1343 aa29.73■■■□□ 2.35
THRA-208ENST00000578218 A0A1W2PQ45 241 aaPredicted RBP29.73■■■□□ 2.35
THRA-208ENST00000578218 A0A1W2PQY0 241 aa29.73■■■□□ 2.35
THRA-208ENST00000578218 TTLL1O95922 423 aa29.73■■■□□ 2.35
THRA-208ENST00000578218 ZNF697Q5TEC3 545 aa29.73■■■□□ 2.35
THRA-208ENST00000578218 SH3RF1Q7Z6J0 888 aa29.73■■■□□ 2.35
THRA-208ENST00000578218 IFNL3Q8IZI9 196 aa29.73■■■□□ 2.35
THRA-208ENST00000578218 RIPK3Q9Y572 518 aa29.73■■■□□ 2.35
THRA-208ENST00000578218 PATL2C9JE40 543 aaKnown RBP29.72■■■□□ 2.35
THRA-208ENST00000578218 CLTBP09497 229 aa29.72■■■□□ 2.35
THRA-208ENST00000578218 TSPY3P0CV98 308 aa29.72■■■□□ 2.35
THRA-208ENST00000578218 TSPY8P0CW00 308 aa29.72■■■□□ 2.35
THRA-208ENST00000578218 TLE2Q04725 743 aa29.72■■■□□ 2.35
THRA-208ENST00000578218 PDE4BQ07343 736 aa29.72■■■□□ 2.35
THRA-208ENST00000578218 FAM109BQ6ICB4 259 aaPredicted RBP29.72■■■□□ 2.35
THRA-208ENST00000578218 FAM161BQ96MY7 647 aa29.72■■■□□ 2.35
THRA-208ENST00000578218 NAPBQ9H115 298 aa29.72■■■□□ 2.35
THRA-208ENST00000578218 RAVER2Q9HCJ3 691 aaKnown RBP29.72■■■□□ 2.35
THRA-208ENST00000578218 MTMR4Q9NYA4 1195 aa29.72■■■□□ 2.35
THRA-208ENST00000578218 FEM1BQ9UK73 627 aa29.72■■■□□ 2.35
THRA-208ENST00000578218 MCM3APO60318 1980 aa29.72■■■□□ 2.35
THRA-208ENST00000578218 SYNRGQ9UMZ2 1314 aa29.71■■■□□ 2.35
THRA-208ENST00000578218 TRIM43BA6NCK2 446 aa29.71■■■□□ 2.35
THRA-208ENST00000578218 ATP2A1O14983 1001 aa29.71■■■□□ 2.35
THRA-208ENST00000578218 PQBP1O60828 265 aaKnown RBP29.71■■■□□ 2.35
THRA-208ENST00000578218 SLC3A2P08195 630 aaKnown RBP29.71■■■□□ 2.35
THRA-208ENST00000578218 SHHQ15465 462 aa29.71■■■□□ 2.35
THRA-208ENST00000578218 C9orf50Q5SZB4 431 aa29.71■■■□□ 2.35
THRA-208ENST00000578218 TRIM43Q96BQ3 446 aaPredicted RBP29.71■■■□□ 2.35
THRA-208ENST00000578218 SEC62Q99442 399 aaKnown RBP29.71■■■□□ 2.35
THRA-208ENST00000578218 SYNPO2Q9UMS6 1093 aa29.71■■■□□ 2.35
THRA-208ENST00000578218 POTEB2H3BUK9 544 aa29.7■■■□□ 2.35
THRA-208ENST00000578218 ADAMTS4O75173 837 aa29.7■■■□□ 2.35
THRA-208ENST00000578218 GMCL1P1Q8NEA9 526 aa29.7■■■□□ 2.35
THRA-208ENST00000578218 SLC38A10Q9HBR0 1119 aa29.7■■■□□ 2.35
THRA-208ENST00000578218 FAM184BQ9ULE4 1060 aa29.7■■■□□ 2.35
THRA-208ENST00000578218 TACC3Q9Y6A5 838 aa29.7■■■□□ 2.35
THRA-208ENST00000578218 ANKRD35Q8N283 1001 aa29.69■■■□□ 2.34
THRA-208ENST00000578218 PI4K2BQ8TCG2 481 aa29.69■■■□□ 2.34
THRA-208ENST00000578218 MKL1Q969V6 931 aa29.69■■■□□ 2.34
THRA-208ENST00000578218 GUCD1Q96NT3 240 aa29.69■■■□□ 2.34
THRA-208ENST00000578218 FBXO40Q9UH90 709 aa29.69■■■□□ 2.34
THRA-208ENST00000578218 DNAJC25-GNG10A0A024R161 153 aa29.68■■■□□ 2.34
THRA-208ENST00000578218 SLFN13Q68D06 897 aa29.68■■■□□ 2.34
THRA-208ENST00000578218 MAMDC4Q6UXC1 1216 aa29.68■■■□□ 2.34
THRA-208ENST00000578218 STARD7Q9NQZ5 370 aa29.68■■■□□ 2.34
THRA-208ENST00000578218 SNAI1O95863 264 aaPredicted RBP29.67■■■□□ 2.34
THRA-208ENST00000578218 BMP3P12645 472 aa29.67■■■□□ 2.34
THRA-208ENST00000578218 OAZ1P54368 228 aa29.67■■■□□ 2.34
THRA-208ENST00000578218 PPARAQ07869 468 aa29.67■■■□□ 2.34
THRA-208ENST00000578218 IKQ13123 557 aaPredicted RBP29.67■■■□□ 2.34
THRA-208ENST00000578218 ZNF467Q7Z7K2 595 aaPredicted RBP29.67■■■□□ 2.34
THRA-208ENST00000578218 NEDD1Q8NHV4 660 aa29.67■■■□□ 2.34
THRA-208ENST00000578218 NUP133Q8WUM0 1156 aa29.67■■■□□ 2.34
THRA-208ENST00000578218 TSEN34Q9BSV6 310 aaKnown RBP29.67■■■□□ 2.34
THRA-208ENST00000578218 HOMER2Q9NSB8 354 aa29.67■■■□□ 2.34
THRA-208ENST00000578218 RAG1P15918 1043 aa29.66■■■□□ 2.34
THRA-208ENST00000578218 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.66■■■□□ 2.34
THRA-208ENST00000578218 CHST13Q8NET6 341 aa29.66■■■□□ 2.34
THRA-208ENST00000578218 OTUD7AQ8TE49 926 aaPredicted RBP29.66■■■□□ 2.34
THRA-208ENST00000578218 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.66■■■□□ 2.34
THRA-208ENST00000578218 MOXD2PA6NHM9 499 aa29.65■■■□□ 2.34
THRA-208ENST00000578218 MX1P20591 662 aa29.65■■■□□ 2.34
THRA-208ENST00000578218 STAT2P52630 851 aa29.65■■■□□ 2.34
THRA-208ENST00000578218 ACLYP53396 1101 aa29.65■■■□□ 2.34
THRA-208ENST00000578218 TFAP4Q01664 338 aa29.65■■■□□ 2.34
THRA-208ENST00000578218 ZMYM1Q5SVZ6 1142 aa29.65■■■□□ 2.34
THRA-208ENST00000578218 PCDHB15Q9Y5E8 787 aa29.65■■■□□ 2.34
THRA-208ENST00000578218 LRRC37A2A6NM11 1700 aa29.65■■■□□ 2.34
THRA-208ENST00000578218 TMEM232C9JQI7 657 aa29.64■■■□□ 2.34
THRA-208ENST00000578218 ACVR2BQ13705 512 aa29.64■■■□□ 2.34
THRA-208ENST00000578218 TMEM39AQ9NV64 488 aa29.64■■■□□ 2.34
THRA-208ENST00000578218 ZBTB47Q9UFB7 747 aaPredicted RBP29.64■■■□□ 2.34
THRA-208ENST00000578218 KIAA0355O15063 1070 aa29.63■■■□□ 2.33
THRA-208ENST00000578218 DUSP11O75319 330 aaKnown RBP29.63■■■□□ 2.33
THRA-208ENST00000578218 ITGB8P26012 769 aa29.63■■■□□ 2.33
THRA-208ENST00000578218 PPP4R3BQ5MIZ7 849 aa29.63■■■□□ 2.33
THRA-208ENST00000578218 ARMCX2Q7L311 632 aa29.63■■■□□ 2.33
THRA-208ENST00000578218 CHMP4CQ96CF2 233 aa29.63■■■□□ 2.33
THRA-208ENST00000578218 RNPC3Q96LT9 517 aaKnown RBP29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms