RNA–Protein interactions for RNA: ENST00000578213.5

PSMD11-206, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 3

Gene PSMD11, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-206ENST00000578213 FRMPD2Q68DX3 1309 aaPredicted RBP25.9■■□□□ 1.74
PSMD11-206ENST00000578213 GNAQP50148 359 aa25.9■■□□□ 1.74
PSMD11-206ENST00000578213 APOBRQ0VD83 1088 aa25.9■■□□□ 1.74
PSMD11-206ENST00000578213 FBXO28Q9NVF7 368 aa25.9■■□□□ 1.74
PSMD11-206ENST00000578213 RBM28Q9NW13 759 aaKnown RBP25.9■■□□□ 1.74
PSMD11-206ENST00000578213 MAD2L2Q9UI95 211 aa25.9■■□□□ 1.74
PSMD11-206ENST00000578213 GOLGA8BA8MQT2 603 aa25.89■■□□□ 1.74
PSMD11-206ENST00000578213 FAM110CQ1W6H9 321 aa25.89■■□□□ 1.74
PSMD11-206ENST00000578213 ZNF274Q96GC6 653 aaPredicted RBP25.89■■□□□ 1.74
PSMD11-206ENST00000578213 LZTS2Q9BRK4 669 aa25.89■■□□□ 1.74
PSMD11-206ENST00000578213 MYL10Q9BUA6 226 aa25.89■■□□□ 1.74
PSMD11-206ENST00000578213 GPCPD1Q9NPB8 672 aa25.89■■□□□ 1.74
PSMD11-206ENST00000578213 RABGAP1Q9Y3P9 1069 aa25.89■■□□□ 1.74
PSMD11-206ENST00000578213 CCDC196A0A1B0GTZ2 297 aa25.88■■□□□ 1.73
PSMD11-206ENST00000578213 ST18O60284 1047 aa25.88■■□□□ 1.73
PSMD11-206ENST00000578213 SMARCA1P28370 1054 aa25.88■■□□□ 1.73
PSMD11-206ENST00000578213 AK2P54819 239 aa25.88■■□□□ 1.73
PSMD11-206ENST00000578213 SYDE2Q5VT97 1194 aa25.88■■□□□ 1.73
PSMD11-206ENST00000578213 FANCBQ8NB91 859 aa25.88■■□□□ 1.73
PSMD11-206ENST00000578213 ATG4CQ96DT6 458 aa25.88■■□□□ 1.73
PSMD11-206ENST00000578213 MORF4L1Q9UBU8 362 aa25.88■■□□□ 1.73
PSMD11-206ENST00000578213 KLRF2D3W0D1 207 aa25.87■■□□□ 1.73
PSMD11-206ENST00000578213 GOLGA8HP0CJ92 632 aa25.87■■□□□ 1.73
PSMD11-206ENST00000578213 BCRP11274 1271 aa25.87■■□□□ 1.73
PSMD11-206ENST00000578213 METAP2P50579 478 aaKnown RBP eCLIP25.87■■□□□ 1.73
PSMD11-206ENST00000578213 RTN1Q16799 776 aa25.87■■□□□ 1.73
PSMD11-206ENST00000578213 C17orf99Q6UX52 265 aa25.87■■□□□ 1.73
PSMD11-206ENST00000578213 KIFC2Q96AC6 838 aa25.87■■□□□ 1.73
PSMD11-206ENST00000578213 PRR12Q9ULL5 1215 aa25.87■■□□□ 1.73
PSMD11-206ENST00000578213 GOLGA8AA7E2F4 631 aa25.86■■□□□ 1.73
PSMD11-206ENST00000578213 VWA5AO00534 786 aa25.86■■□□□ 1.73
PSMD11-206ENST00000578213 TTBK2Q6IQ55 1244 aa25.86■■□□□ 1.73
PSMD11-206ENST00000578213 STAG2Q8N3U4 1231 aa25.86■■□□□ 1.73
PSMD11-206ENST00000578213 CHMP4CQ96CF2 233 aa25.86■■□□□ 1.73
PSMD11-206ENST00000578213 SLC38A10Q9HBR0 1119 aa25.86■■□□□ 1.73
PSMD11-206ENST00000578213 PNMA2Q9UL42 364 aa25.86■■□□□ 1.73
PSMD11-206ENST00000578213 NAP1L2Q9ULW6 460 aaPredicted RBP25.86■■□□□ 1.73
PSMD11-206ENST00000578213 SMCHD1A6NHR9 2005 aa25.85■■□□□ 1.73
PSMD11-206ENST00000578213 DOCK3Q8IZD9 2030 aa25.85■■□□□ 1.73
PSMD11-206ENST00000578213 ZBED4O75132 1171 aa25.85■■□□□ 1.73
PSMD11-206ENST00000578213 TBC1D8O95759 1140 aa25.85■■□□□ 1.73
PSMD11-206ENST00000578213 PDIA3P30101 505 aaKnown RBP25.85■■□□□ 1.73
PSMD11-206ENST00000578213 OAZ1P54368 228 aa25.85■■□□□ 1.73
PSMD11-206ENST00000578213 SPZ1Q9BXG8 430 aa25.85■■□□□ 1.73
PSMD11-206ENST00000578213 RBBP6Q7Z6E9 1792 aaKnown RBP25.84■■□□□ 1.73
PSMD11-206ENST00000578213 ATP2A1O14983 1001 aa25.84■■□□□ 1.73
PSMD11-206ENST00000578213 RXRAP19793 462 aa25.84■■□□□ 1.73
PSMD11-206ENST00000578213 RANBP17Q9H2T7 1088 aaKnown RBP25.84■■□□□ 1.73
PSMD11-206ENST00000578213 RBPJLQ9UBG7 517 aa25.84■■□□□ 1.73
PSMD11-206ENST00000578213 HPS5Q9UPZ3 1129 aa25.84■■□□□ 1.73
PSMD11-206ENST00000578213 CTDP1Q9Y5B0 961 aaPredicted RBP25.84■■□□□ 1.73
PSMD11-206ENST00000578213 SLC16A2P36021 539 aa25.83■■□□□ 1.73
PSMD11-206ENST00000578213 MCM2P49736 904 aa25.83■■□□□ 1.73
PSMD11-206ENST00000578213 ERVK-9P63128 1117 aa25.83■■□□□ 1.73
PSMD11-206ENST00000578213 ERVK-24P63145 666 aa25.83■■□□□ 1.73
PSMD11-206ENST00000578213 CCNA1P78396 465 aa25.83■■□□□ 1.73
PSMD11-206ENST00000578213 SAMD1Q6SPF0 538 aaPredicted RBP25.83■■□□□ 1.73
PSMD11-206ENST00000578213 TMTC3Q6ZXV5 915 aa25.83■■□□□ 1.73
PSMD11-206ENST00000578213 ANKRD13CQ8N6S4 541 aa25.83■■□□□ 1.73
PSMD11-206ENST00000578213 REPS2Q8NFH8 660 aa25.83■■□□□ 1.73
PSMD11-206ENST00000578213 GPRC5AQ8NFJ5 357 aa25.83■■□□□ 1.73
PSMD11-206ENST00000578213 PAGR1Q9BTK6 254 aa25.83■■□□□ 1.73
PSMD11-206ENST00000578213 RIOX1Q9H6W3 641 aa25.83■■□□□ 1.73
PSMD11-206ENST00000578213 CPA4Q9UI42 421 aa25.83■■□□□ 1.73
PSMD11-206ENST00000578213 PLXNB2O15031 1838 aa25.83■■□□□ 1.73
PSMD11-206ENST00000578213 ZNFX1Q9P2E3 1918 aaKnown RBP25.82■■□□□ 1.72
PSMD11-206ENST00000578213 CASP8AP2Q9UKL3 1982 aa25.82■■□□□ 1.72
PSMD11-206ENST00000578213 COPB2P35606 906 aa25.82■■□□□ 1.72
PSMD11-206ENST00000578213 CCDC144CPQ8IYA2 1237 aa25.82■■□□□ 1.72
PSMD11-206ENST00000578213 ADGRF4Q8IZF3 695 aa25.82■■□□□ 1.72
PSMD11-206ENST00000578213 TXNRD2Q9NNW7 524 aa25.82■■□□□ 1.72
PSMD11-206ENST00000578213 ZNF214Q9UL59 606 aaPredicted RBP25.82■■□□□ 1.72
PSMD11-206ENST00000578213 TPCN1Q9ULQ1 816 aa25.82■■□□□ 1.72
PSMD11-206ENST00000578213 LIMCH1Q9UPQ0 1083 aa25.82■■□□□ 1.72
PSMD11-206ENST00000578213 GPR25O00155 361 aa25.81■■□□□ 1.72
PSMD11-206ENST00000578213 DHX16O60231 1041 aaKnown RBP25.81■■□□□ 1.72
PSMD11-206ENST00000578213 CNMDO75829 334 aa25.81■■□□□ 1.72
PSMD11-206ENST00000578213 HSPA1AP0DMV8 641 aaKnown RBP25.81■■□□□ 1.72
PSMD11-206ENST00000578213 HSPA1BP0DMV9 641 aaKnown RBP25.81■■□□□ 1.72
PSMD11-206ENST00000578213 POTEEQ6S8J3 1075 aa25.81■■□□□ 1.72
PSMD11-206ENST00000578213 RAB11FIP4Q86YS3 637 aa25.81■■□□□ 1.72
PSMD11-206ENST00000578213 MTMR8Q96EF0 704 aa25.81■■□□□ 1.72
PSMD11-206ENST00000578213 TEX13BQ9BXU2 312 aa25.81■■□□□ 1.72
PSMD11-206ENST00000578213 UBA5Q9GZZ9 404 aa25.81■■□□□ 1.72
PSMD11-206ENST00000578213 SPATC1LQ9H0A9 340 aa25.81■■□□□ 1.72
PSMD11-206ENST00000578213 R3HDMLQ9H3Y0 253 aa25.81■■□□□ 1.72
PSMD11-206ENST00000578213 BTBD7Q9P203 1132 aa25.81■■□□□ 1.72
PSMD11-206ENST00000578213 PFKFB2O60825 505 aa25.8■■□□□ 1.72
PSMD11-206ENST00000578213 SP3Q02447 781 aa25.8■■□□□ 1.72
PSMD11-206ENST00000578213 TMEM132BQ14DG7 1078 aa25.8■■□□□ 1.72
PSMD11-206ENST00000578213 ZSCAN31Q96LW9 406 aaPredicted RBP25.8■■□□□ 1.72
PSMD11-206ENST00000578213 SLKQ9H2G2 1235 aaPredicted RBP25.8■■□□□ 1.72
PSMD11-206ENST00000578213 FAM217BQ9NTX9 383 aaPredicted RBP25.8■■□□□ 1.72
PSMD11-206ENST00000578213 ZNF236Q9UL36 1845 aa25.79■■□□□ 1.72
PSMD11-206ENST00000578213 PLEKHA8P1O95397 391 aa25.79■■□□□ 1.72
PSMD11-206ENST00000578213 SLC25A27O95847 323 aa25.79■■□□□ 1.72
PSMD11-206ENST00000578213 TRAF1Q13077 416 aa25.79■■□□□ 1.72
PSMD11-206ENST00000578213 CDC37Q16543 378 aaPredicted RBP25.79■■□□□ 1.72
PSMD11-206ENST00000578213 CPLX2Q6PUV4 134 aaKnown RBP25.79■■□□□ 1.72
PSMD11-206ENST00000578213 SHCBP1Q8NEM2 672 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms