RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-208ENST00000578178 IL25Q9H293 177 aa12.91□□□□□ -0.34
PPP4R1-208ENST00000578178 ISY1Q9ULR0 285 aaKnown RBP12.91□□□□□ -0.34
PPP4R1-208ENST00000578178 ZNFX1Q9P2E3 1918 aaKnown RBP12.91□□□□□ -0.34
PPP4R1-208ENST00000578178 ATP2A1O14983 1001 aa12.9□□□□□ -0.34
PPP4R1-208ENST00000578178 FCER1AP12319 257 aa12.9□□□□□ -0.34
PPP4R1-208ENST00000578178 STAT2P52630 851 aa12.9□□□□□ -0.34
PPP4R1-208ENST00000578178 CACNB2Q08289 660 aaPredicted RBP12.9□□□□□ -0.34
PPP4R1-208ENST00000578178 IMMTQ16891 758 aaKnown RBP12.9□□□□□ -0.34
PPP4R1-208ENST00000578178 SNRNP48Q6IEG0 339 aaKnown RBP12.9□□□□□ -0.34
PPP4R1-208ENST00000578178 CENPQQ7L2Z9 268 aaPredicted RBP12.9□□□□□ -0.34
PPP4R1-208ENST00000578178 DPP9Q86TI2 863 aa12.9□□□□□ -0.34
PPP4R1-208ENST00000578178 FAM160B2Q86V87 743 aa12.9□□□□□ -0.34
PPP4R1-208ENST00000578178 RUFY2Q8WXA3 655 aa12.9□□□□□ -0.34
PPP4R1-208ENST00000578178 ESR2Q92731 530 aa12.9□□□□□ -0.34
PPP4R1-208ENST00000578178 MMP19Q99542 508 aa12.9□□□□□ -0.34
PPP4R1-208ENST00000578178 SLC38A10Q9HBR0 1119 aa12.9□□□□□ -0.34
PPP4R1-208ENST00000578178 TCP11L1Q9NUJ3 509 aa12.9□□□□□ -0.34
PPP4R1-208ENST00000578178 SLC5A4Q9NY91 659 aa12.9□□□□□ -0.34
PPP4R1-208ENST00000578178 FLRT1Q9NZU1 646 aa12.9□□□□□ -0.34
PPP4R1-208ENST00000578178 CTNNA3Q9UI47 895 aa12.9□□□□□ -0.34
PPP4R1-208ENST00000578178 CTDP1Q9Y5B0 961 aaPredicted RBP12.9□□□□□ -0.34
PPP4R1-208ENST00000578178 TMEM232C9JQI7 657 aa12.89□□□□□ -0.35
PPP4R1-208ENST00000578178 ZBED4O75132 1171 aa12.89□□□□□ -0.35
PPP4R1-208ENST00000578178 TFRCP02786 760 aaKnown RBP12.89□□□□□ -0.35
PPP4R1-208ENST00000578178 FDX1P10109 184 aa12.89□□□□□ -0.35
PPP4R1-208ENST00000578178 TOP1P11387 765 aaKnown RBP12.89□□□□□ -0.35
PPP4R1-208ENST00000578178 MCCP23508 829 aa12.89□□□□□ -0.35
PPP4R1-208ENST00000578178 CHMLP26374 656 aa12.89□□□□□ -0.35
PPP4R1-208ENST00000578178 OAZ1P54368 228 aa12.89□□□□□ -0.35
PPP4R1-208ENST00000578178 IKQ13123 557 aaPredicted RBP12.89□□□□□ -0.35
PPP4R1-208ENST00000578178 KCTD2Q14681 263 aa12.89□□□□□ -0.35
PPP4R1-208ENST00000578178 OLFML2BQ68BL8 750 aa12.89□□□□□ -0.35
PPP4R1-208ENST00000578178 RASGRP2Q7LDG7 609 aa12.89□□□□□ -0.35
PPP4R1-208ENST00000578178 DCAF4Q8WV16 495 aa12.89□□□□□ -0.35
PPP4R1-208ENST00000578178 PLA2G6O60733 806 aa12.88□□□□□ -0.35
PPP4R1-208ENST00000578178 COBLO75128 1261 aa12.88□□□□□ -0.35
PPP4R1-208ENST00000578178 IGHA2P01877 340 aa12.88□□□□□ -0.35
PPP4R1-208ENST00000578178 CCND3P30281 292 aaPredicted RBP12.88□□□□□ -0.35
PPP4R1-208ENST00000578178 CCDC96Q2M329 555 aa12.88□□□□□ -0.35
PPP4R1-208ENST00000578178 KCTD1Q719H9 257 aa12.88□□□□□ -0.35
PPP4R1-208ENST00000578178 CPXCR1Q8N123 301 aa12.88□□□□□ -0.35
PPP4R1-208ENST00000578178 ANKLE1Q8NAG6 615 aa12.88□□□□□ -0.35
PPP4R1-208ENST00000578178 CHURC1Q8WUH1 139 aa12.88□□□□□ -0.35
PPP4R1-208ENST00000578178 TMEM47Q9BQJ4 181 aa12.88□□□□□ -0.35
PPP4R1-208ENST00000578178 MTMR7Q9Y216 660 aa12.88□□□□□ -0.35
PPP4R1-208ENST00000578178 B4E1Z4 1266 aa12.87□□□□□ -0.35
PPP4R1-208ENST00000578178 CYP2C19P33261 490 aa12.87□□□□□ -0.35
PPP4R1-208ENST00000578178 RCSD1Q6JBY9 416 aa12.87□□□□□ -0.35
PPP4R1-208ENST00000578178 IQCA1Q86XH1 822 aa12.87□□□□□ -0.35
PPP4R1-208ENST00000578178 CHMP4CQ96CF2 233 aa12.87□□□□□ -0.35
PPP4R1-208ENST00000578178 MAML3Q96JK9 1138 aa12.87□□□□□ -0.35
PPP4R1-208ENST00000578178 TTC14Q96N46 770 aa12.87□□□□□ -0.35
PPP4R1-208ENST00000578178 HTATIP2Q9BUP3 242 aa12.87□□□□□ -0.35
PPP4R1-208ENST00000578178 RAVER2Q9HCJ3 691 aaKnown RBP12.87□□□□□ -0.35
PPP4R1-208ENST00000578178 OGDHLQ9ULD0 1010 aa12.87□□□□□ -0.35
PPP4R1-208ENST00000578178 RIPK3Q9Y572 518 aa12.87□□□□□ -0.35
PPP4R1-208ENST00000578178 ALPK3Q96L96 1907 aa12.86□□□□□ -0.35
PPP4R1-208ENST00000578178 SGSM2O43147 1006 aa12.86□□□□□ -0.35
PPP4R1-208ENST00000578178 MSCO60682 206 aa12.86□□□□□ -0.35
PPP4R1-208ENST00000578178 KDM4AO75164 1064 aa12.86□□□□□ -0.35
PPP4R1-208ENST00000578178 CYBAP13498 195 aa12.86□□□□□ -0.35
PPP4R1-208ENST00000578178 CCDC178Q5BJE1 867 aa12.86□□□□□ -0.35
PPP4R1-208ENST00000578178 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.86□□□□□ -0.35
PPP4R1-208ENST00000578178 CHST13Q8NET6 341 aa12.86□□□□□ -0.35
PPP4R1-208ENST00000578178 KRT23Q9C075 422 aa12.86□□□□□ -0.35
PPP4R1-208ENST00000578178 CNNM2Q9H8M5 875 aa12.86□□□□□ -0.35
PPP4R1-208ENST00000578178 FBXO40Q9UH90 709 aa12.86□□□□□ -0.35
PPP4R1-208ENST00000578178 PRR12Q9ULL5 1215 aa12.86□□□□□ -0.35
PPP4R1-208ENST00000578178 DIS3Q9Y2L1 958 aaKnown RBP12.86□□□□□ -0.35
PPP4R1-208ENST00000578178 PGK2P07205 417 aa12.85□□□□□ -0.35
PPP4R1-208ENST00000578178 SNHG28P0DPA3 235 aa12.85□□□□□ -0.35
PPP4R1-208ENST00000578178 PDHBP11177 359 aa12.85□□□□□ -0.35
PPP4R1-208ENST00000578178 SLC4A3P48751 1232 aa12.85□□□□□ -0.35
PPP4R1-208ENST00000578178 ZNF792Q3KQV3 632 aa12.85□□□□□ -0.35
PPP4R1-208ENST00000578178 NECAB2Q7Z6G3 386 aa12.85□□□□□ -0.35
PPP4R1-208ENST00000578178 DGKHQ86XP1 1220 aa12.85□□□□□ -0.35
PPP4R1-208ENST00000578178 DIS3LQ8TF46 1054 aaKnown RBP12.85□□□□□ -0.35
PPP4R1-208ENST00000578178 PAWRQ96IZ0 340 aaKnown RBP12.85□□□□□ -0.35
PPP4R1-208ENST00000578178 ZKSCAN3Q9BRR0 538 aa12.85□□□□□ -0.35
PPP4R1-208ENST00000578178 DDX20Q9UHI6 824 aaKnown RBP12.85□□□□□ -0.35
PPP4R1-208ENST00000578178 U3KPZ7 1027 aaPredicted RBP12.85□□□□□ -0.35
PPP4R1-208ENST00000578178 ZNF536O15090 1300 aa12.85□□□□□ -0.35
PPP4R1-208ENST00000578178 FRMPD2Q68DX3 1309 aaPredicted RBP12.85□□□□□ -0.35
PPP4R1-208ENST00000578178 CEP290O15078 2479 aa12.84□□□□□ -0.35
PPP4R1-208ENST00000578178 DNAJC25-GNG10A0A024R161 153 aa12.84□□□□□ -0.35
PPP4R1-208ENST00000578178 CNGA1P29973 690 aa12.84□□□□□ -0.35
PPP4R1-208ENST00000578178 PTH1RQ03431 593 aa12.84□□□□□ -0.35
PPP4R1-208ENST00000578178 ZNF543Q08ER8 600 aa12.84□□□□□ -0.35
PPP4R1-208ENST00000578178 TKFCQ3LXA3 575 aa12.84□□□□□ -0.35
PPP4R1-208ENST00000578178 BMP2KLQ5H9B9 411 aa12.84□□□□□ -0.35
PPP4R1-208ENST00000578178 SYDE2Q5VT97 1194 aa12.84□□□□□ -0.35
PPP4R1-208ENST00000578178 LHX8Q68G74 356 aa12.84□□□□□ -0.35
PPP4R1-208ENST00000578178 BTNL9Q6UXG8 535 aa12.84□□□□□ -0.35
PPP4R1-208ENST00000578178 TRPV1Q8NER1 839 aa12.84□□□□□ -0.35
PPP4R1-208ENST00000578178 DDX11Q96FC9 970 aa12.84□□□□□ -0.35
PPP4R1-208ENST00000578178 ZSCAN10Q96SZ4 725 aaPredicted RBP12.84□□□□□ -0.35
PPP4R1-208ENST00000578178 UBAC1Q9BSL1 405 aa12.84□□□□□ -0.35
PPP4R1-208ENST00000578178 RANBP17Q9H2T7 1088 aaKnown RBP12.84□□□□□ -0.35
PPP4R1-208ENST00000578178 ACAD9Q9H845 621 aa12.84□□□□□ -0.35
PPP4R1-208ENST00000578178 HOMER2Q9NSB8 354 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms