RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 FPGSQ05932 587 aa13.44□□□□□ -0.26
SMARCE1-214ENST00000578112 TICAM2Q86XR7 235 aa13.44□□□□□ -0.26
SMARCE1-214ENST00000578112 KBTBD3Q8NAB2 608 aa13.44□□□□□ -0.26
SMARCE1-214ENST00000578112 TRIM43Q96BQ3 446 aaPredicted RBP13.44□□□□□ -0.26
SMARCE1-214ENST00000578112 STRBPQ96SI9 672 aaKnown RBP13.44□□□□□ -0.26
SMARCE1-214ENST00000578112 PRDM5Q9NQX1 630 aaPredicted RBP13.44□□□□□ -0.26
SMARCE1-214ENST00000578112 LOC102724159A0A0B4J2E5 919 aa13.43□□□□□ -0.26
SMARCE1-214ENST00000578112 PWP2Q15269 919 aaKnown RBP13.43□□□□□ -0.26
SMARCE1-214ENST00000578112 RASA1P20936 1047 aa13.43□□□□□ -0.26
SMARCE1-214ENST00000578112 PPIGQ13427 754 aaKnown RBP eCLIP13.43□□□□□ -0.26
SMARCE1-214ENST00000578112 FAM83BQ5T0W9 1011 aa13.43□□□□□ -0.26
SMARCE1-214ENST00000578112 CCSAPQ6IQ19 270 aaPredicted RBP13.43□□□□□ -0.26
SMARCE1-214ENST00000578112 CCDC129Q6ZRS4 1044 aa13.43□□□□□ -0.26
SMARCE1-214ENST00000578112 SPICE1Q8N0Z3 855 aa13.43□□□□□ -0.26
SMARCE1-214ENST00000578112 CDX2Q99626 313 aaPredicted RBP13.43□□□□□ -0.26
SMARCE1-214ENST00000578112 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.43□□□□□ -0.26
SMARCE1-214ENST00000578112 ABHD16BQ9H3Z7 469 aa13.43□□□□□ -0.26
SMARCE1-214ENST00000578112 CTDP1Q9Y5B0 961 aaPredicted RBP13.43□□□□□ -0.26
SMARCE1-214ENST00000578112 MYH4Q9Y623 1939 aa13.42□□□□□ -0.26
SMARCE1-214ENST00000578112 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.42□□□□□ -0.26
SMARCE1-214ENST00000578112 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.42□□□□□ -0.26
SMARCE1-214ENST00000578112 TLR3O15455 904 aaKnown RBP13.42□□□□□ -0.26
SMARCE1-214ENST00000578112 CABYRO75952 493 aa13.42□□□□□ -0.26
SMARCE1-214ENST00000578112 RAG1P15918 1043 aa13.42□□□□□ -0.26
SMARCE1-214ENST00000578112 ACLYP53396 1101 aa13.42□□□□□ -0.26
SMARCE1-214ENST00000578112 GJA9P57773 515 aa13.42□□□□□ -0.26
SMARCE1-214ENST00000578112 FAM160B2Q86V87 743 aa13.42□□□□□ -0.26
SMARCE1-214ENST00000578112 MKNK2Q9HBH9 465 aa13.42□□□□□ -0.26
SMARCE1-214ENST00000578112 STARD7Q9NQZ5 370 aa13.42□□□□□ -0.26
SMARCE1-214ENST00000578112 APBB1O00213 710 aa13.42□□□□□ -0.26
SMARCE1-214ENST00000578112 TIMP1P01033 207 aa13.42□□□□□ -0.26
SMARCE1-214ENST00000578112 SLC3A2P08195 630 aaKnown RBP13.42□□□□□ -0.26
SMARCE1-214ENST00000578112 PRAMEF19Q5SWL8 479 aa13.42□□□□□ -0.26
SMARCE1-214ENST00000578112 DDX11Q96FC9 970 aa13.42□□□□□ -0.26
SMARCE1-214ENST00000578112 RNPC3Q96LT9 517 aaKnown RBP13.42□□□□□ -0.26
SMARCE1-214ENST00000578112 SLC38A10Q9HBR0 1119 aa13.42□□□□□ -0.26
SMARCE1-214ENST00000578112 TMEM39AQ9NV64 488 aa13.42□□□□□ -0.26
SMARCE1-214ENST00000578112 PNMA2Q9UL42 364 aa13.42□□□□□ -0.26
SMARCE1-214ENST00000578112 SYNRGQ9UMZ2 1314 aa13.42□□□□□ -0.26
SMARCE1-214ENST00000578112 TTC41PQ6P2S7 1318 aa13.41□□□□□ -0.26
SMARCE1-214ENST00000578112 A0A0U1RQG5 324 aaPredicted RBP13.41□□□□□ -0.26
SMARCE1-214ENST00000578112 GSG1L2A8MUP6 293 aa13.41□□□□□ -0.26
SMARCE1-214ENST00000578112 F5H6K3 240 aa13.41□□□□□ -0.26
SMARCE1-214ENST00000578112 RNF113AO15541 343 aaKnown RBP13.41□□□□□ -0.26
SMARCE1-214ENST00000578112 EVX2Q03828 476 aa13.41□□□□□ -0.26
SMARCE1-214ENST00000578112 KLRC3Q07444 240 aa13.41□□□□□ -0.26
SMARCE1-214ENST00000578112 SNRNP48Q6IEG0 339 aaKnown RBP13.41□□□□□ -0.26
SMARCE1-214ENST00000578112 MAFAQ8NHW3 353 aaPredicted RBP13.41□□□□□ -0.26
SMARCE1-214ENST00000578112 COL25A1Q9BXS0 654 aaPredicted RBP13.41□□□□□ -0.26
SMARCE1-214ENST00000578112 MAF1Q9H063 256 aa13.41□□□□□ -0.26
SMARCE1-214ENST00000578112 PUS7LQ9H0K6 701 aaKnown RBP13.41□□□□□ -0.26
SMARCE1-214ENST00000578112 Q9Y3F1 56 aa13.41□□□□□ -0.26
SMARCE1-214ENST00000578112 NDUFB10O96000 172 aa13.4□□□□□ -0.26
SMARCE1-214ENST00000578112 CDK7P50613 346 aa13.4□□□□□ -0.26
SMARCE1-214ENST00000578112 C9orf50Q5SZB4 431 aa13.4□□□□□ -0.26
SMARCE1-214ENST00000578112 PSRC1Q6PGN9 363 aaPredicted RBP13.4□□□□□ -0.26
SMARCE1-214ENST00000578112 ZNF444Q8N0Y2 327 aaPredicted RBP13.4□□□□□ -0.26
SMARCE1-214ENST00000578112 GLT1D1Q96MS3 346 aa13.4□□□□□ -0.26
SMARCE1-214ENST00000578112 NACAP1Q9BZK3 213 aa13.4□□□□□ -0.26
SMARCE1-214ENST00000578112 TBX21Q9UL17 535 aa13.4□□□□□ -0.26
SMARCE1-214ENST00000578112 LRRC37A2A6NM11 1700 aa13.4□□□□□ -0.26
SMARCE1-214ENST00000578112 SNAI1O95863 264 aaPredicted RBP13.4□□□□□ -0.26
SMARCE1-214ENST00000578112 TTLL1O95922 423 aa13.4□□□□□ -0.26
SMARCE1-214ENST00000578112 MFSD5Q6N075 450 aa13.4□□□□□ -0.26
SMARCE1-214ENST00000578112 FBXO28Q9NVF7 368 aa13.4□□□□□ -0.26
SMARCE1-214ENST00000578112 COG6Q9Y2V7 657 aa13.4□□□□□ -0.26
SMARCE1-214ENST00000578112 ASB14A6NK59 587 aa13.39□□□□□ -0.27
SMARCE1-214ENST00000578112 PGK2P07205 417 aa13.39□□□□□ -0.27
SMARCE1-214ENST00000578112 PDE4BQ07343 736 aa13.39□□□□□ -0.27
SMARCE1-214ENST00000578112 FAAP100Q0VG06 881 aa13.39□□□□□ -0.27
SMARCE1-214ENST00000578112 ACVR2BQ13705 512 aa13.39□□□□□ -0.27
SMARCE1-214ENST00000578112 RASIP1Q5U651 963 aa13.39□□□□□ -0.27
SMARCE1-214ENST00000578112 SH3RF1Q7Z6J0 888 aa13.39□□□□□ -0.27
SMARCE1-214ENST00000578112 CLEC10AQ8IUN9 316 aa13.39□□□□□ -0.27
SMARCE1-214ENST00000578112 TMEM199Q8N511 208 aa13.39□□□□□ -0.27
SMARCE1-214ENST00000578112 NEDD1Q8NHV4 660 aa13.39□□□□□ -0.27
SMARCE1-214ENST00000578112 CHURC1Q8WUH1 139 aa13.39□□□□□ -0.27
SMARCE1-214ENST00000578112 GMCL1Q96IK5 515 aa13.39□□□□□ -0.27
SMARCE1-214ENST00000578112 MTIF3Q9H2K0 278 aaKnown RBP13.39□□□□□ -0.27
SMARCE1-214ENST00000578112 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.39□□□□□ -0.27
SMARCE1-214ENST00000578112 CYP2D7A0A087X1C5 515 aa13.39□□□□□ -0.27
SMARCE1-214ENST00000578112 PATL2C9JE40 543 aaKnown RBP13.39□□□□□ -0.27
SMARCE1-214ENST00000578112 NT5C2P49902 561 aa13.39□□□□□ -0.27
SMARCE1-214ENST00000578112 RCSD1Q6JBY9 416 aa13.39□□□□□ -0.27
SMARCE1-214ENST00000578112 FERMT2Q96AC1 680 aa13.39□□□□□ -0.27
SMARCE1-214ENST00000578112 DCTPP1Q9H773 170 aa13.39□□□□□ -0.27
SMARCE1-214ENST00000578112 MTMR4Q9NYA4 1195 aa13.39□□□□□ -0.27
SMARCE1-214ENST00000578112 MKI67P46013 3256 aaKnown RBP13.39□□□□□ -0.27
SMARCE1-214ENST00000578112 ARVCFO00192 962 aa13.38□□□□□ -0.27
SMARCE1-214ENST00000578112 ZEB2O60315 1214 aa13.38□□□□□ -0.27
SMARCE1-214ENST00000578112 PGK1P00558 417 aa13.38□□□□□ -0.27
SMARCE1-214ENST00000578112 FOSL2P15408 326 aa13.38□□□□□ -0.27
SMARCE1-214ENST00000578112 ANO1Q5XXA6 986 aa13.38□□□□□ -0.27
SMARCE1-214ENST00000578112 SLC43A3Q8NBI5 491 aa13.38□□□□□ -0.27
SMARCE1-214ENST00000578112 ACAD9Q9H845 621 aa13.38□□□□□ -0.27
SMARCE1-214ENST00000578112 ERC2O15083 957 aa13.38□□□□□ -0.27
SMARCE1-214ENST00000578112 RAB30Q15771 203 aa13.38□□□□□ -0.27
SMARCE1-214ENST00000578112 AKNAD1Q5T1N1 836 aa13.38□□□□□ -0.27
SMARCE1-214ENST00000578112 TTYH1Q9H313 450 aaPredicted RBP13.38□□□□□ -0.27
SMARCE1-214ENST00000578112 RCAN3Q9UKA8 241 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms