RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 MYO1BO43795 1136 aa7.85□□□□□ -1.15
KRT39-203ENST00000578078 SASH3O75995 380 aa7.85□□□□□ -1.15
KRT39-203ENST00000578078 PDCP20941 246 aa7.85□□□□□ -1.15
KRT39-203ENST00000578078 GPTP24298 496 aa7.85□□□□□ -1.15
KRT39-203ENST00000578078 GNA15P30679 374 aa7.85□□□□□ -1.15
KRT39-203ENST00000578078 PTH1RQ03431 593 aa7.85□□□□□ -1.15
KRT39-203ENST00000578078 TRAF1Q13077 416 aa7.85□□□□□ -1.15
KRT39-203ENST00000578078 SERINC3Q13530 473 aa7.85□□□□□ -1.15
KRT39-203ENST00000578078 PDCD2Q16342 344 aaPredicted RBP7.85□□□□□ -1.15
KRT39-203ENST00000578078 HSP90B2PQ58FF3 399 aa7.85□□□□□ -1.15
KRT39-203ENST00000578078 ALG1LQ6GMV1 187 aa7.85□□□□□ -1.15
KRT39-203ENST00000578078 PRPF40BQ6NWY9 871 aaKnown RBP7.85□□□□□ -1.15
KRT39-203ENST00000578078 EP400NLQ6ZTU2 488 aa7.85□□□□□ -1.15
KRT39-203ENST00000578078 NLRP10Q86W26 655 aa7.85□□□□□ -1.15
KRT39-203ENST00000578078 AMOTL1Q8IY63 956 aa7.85□□□□□ -1.15
KRT39-203ENST00000578078 MPNDQ8N594 471 aa7.85□□□□□ -1.15
KRT39-203ENST00000578078 SMARCC1Q92922 1105 aaPredicted RBP7.85□□□□□ -1.15
KRT39-203ENST00000578078 FAM89AQ96GI7 184 aa7.85□□□□□ -1.15
KRT39-203ENST00000578078 CABS1Q96KC9 395 aa7.85□□□□□ -1.15
KRT39-203ENST00000578078 PPP1R13BQ96KQ4 1090 aa7.85□□□□□ -1.15
KRT39-203ENST00000578078 ZSCAN31Q96LW9 406 aaPredicted RBP7.85□□□□□ -1.15
KRT39-203ENST00000578078 FAM227BQ96M60 508 aa7.85□□□□□ -1.15
KRT39-203ENST00000578078 TM6SF1Q9BZW5 370 aa7.85□□□□□ -1.15
KRT39-203ENST00000578078 TRIM6Q9C030 488 aaPredicted RBP7.85□□□□□ -1.15
KRT39-203ENST00000578078 CLSTN2Q9H4D0 955 aa7.85□□□□□ -1.15
KRT39-203ENST00000578078 SPC25Q9HBM1 224 aa7.85□□□□□ -1.15
KRT39-203ENST00000578078 SRA1Q9HD15 236 aaKnown RBP7.85□□□□□ -1.15
KRT39-203ENST00000578078 SH2B1Q9NRF2 756 aaPredicted RBP7.85□□□□□ -1.15
KRT39-203ENST00000578078 CCDC87Q9NVE4 849 aa7.85□□□□□ -1.15
KRT39-203ENST00000578078 RAB21Q9UL25 225 aa7.85□□□□□ -1.15
KRT39-203ENST00000578078 CNPY2Q9Y2B0 182 aa7.85□□□□□ -1.15
KRT39-203ENST00000578078 RBM8AQ9Y5S9 174 aaKnown RBP7.85□□□□□ -1.15
KRT39-203ENST00000578078 ARAP2Q8WZ64 1704 aa7.84□□□□□ -1.15
KRT39-203ENST00000578078 PALLDQ8WX93 1383 aa7.84□□□□□ -1.15
KRT39-203ENST00000578078 FZD6O60353 706 aa7.84□□□□□ -1.15
KRT39-203ENST00000578078 CSF1RP07333 972 aa7.84□□□□□ -1.15
KRT39-203ENST00000578078 PSMA5P28066 241 aa7.84□□□□□ -1.15
KRT39-203ENST00000578078 HNRNPH1P31943 449 aaKnown RBP7.84□□□□□ -1.15
KRT39-203ENST00000578078 RDXP35241 583 aaKnown RBP7.84□□□□□ -1.15
KRT39-203ENST00000578078 GJA8P48165 433 aa7.84□□□□□ -1.15
KRT39-203ENST00000578078 SLC8A3P57103 927 aa7.84□□□□□ -1.15
KRT39-203ENST00000578078 PPP2R5AQ15172 486 aa7.84□□□□□ -1.15
KRT39-203ENST00000578078 ENOX2Q16206 610 aaKnown RBP7.84□□□□□ -1.15
KRT39-203ENST00000578078 HLFQ16534 295 aa7.84□□□□□ -1.15
KRT39-203ENST00000578078 PREPLQ4J6C6 727 aaPredicted RBP7.84□□□□□ -1.15
KRT39-203ENST00000578078 ANO6Q4KMQ2 910 aa7.84□□□□□ -1.15
KRT39-203ENST00000578078 LRRC24Q50LG9 513 aa7.84□□□□□ -1.15
KRT39-203ENST00000578078 WLSQ5T9L3 541 aa7.84□□□□□ -1.15
KRT39-203ENST00000578078 BRAPQ7Z569 592 aa7.84□□□□□ -1.15
KRT39-203ENST00000578078 YTHDF3Q7Z739 585 aaKnown RBP7.84□□□□□ -1.15
KRT39-203ENST00000578078 LUZP1Q86V48 1076 aa7.84□□□□□ -1.15
KRT39-203ENST00000578078 CEP112Q8N8E3 955 aa7.84□□□□□ -1.15
KRT39-203ENST00000578078 MARCH10Q8NA82 808 aaPredicted RBP7.84□□□□□ -1.15
KRT39-203ENST00000578078 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.84□□□□□ -1.15
KRT39-203ENST00000578078 GOLGA1Q92805 767 aa7.84□□□□□ -1.15
KRT39-203ENST00000578078 MAP4K1Q92918 833 aa7.84□□□□□ -1.15
KRT39-203ENST00000578078 JAKMIP1Q96N16 626 aaKnown RBP7.84□□□□□ -1.15
KRT39-203ENST00000578078 BATF3Q9NR55 127 aa7.84□□□□□ -1.15
KRT39-203ENST00000578078 HOMER3Q9NSC5 361 aa7.84□□□□□ -1.15
KRT39-203ENST00000578078 ETAA1Q9NY74 926 aa7.84□□□□□ -1.15
KRT39-203ENST00000578078 DDX56Q9NY93 547 aaKnown RBP7.84□□□□□ -1.15
KRT39-203ENST00000578078 HMG20BQ9P0W2 317 aa7.84□□□□□ -1.15
KRT39-203ENST00000578078 TRMT112Q9UI30 125 aaKnown RBP7.84□□□□□ -1.15
KRT39-203ENST00000578078 CYP46A1Q9Y6A2 500 aa7.84□□□□□ -1.15
KRT39-203ENST00000578078 MYH14Q7Z406 1995 aaKnown RBP7.84□□□□□ -1.15
KRT39-203ENST00000578078 LOC102724428A0A0B4J2F2 783 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 IRS4O14654 1257 aaPredicted RBP7.83□□□□□ -1.16
KRT39-203ENST00000578078 ZSCAN12O43309 604 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 SHOX2O60902 331 aaPredicted RBP7.83□□□□□ -1.16
KRT39-203ENST00000578078 CTSHP09668 335 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 ATF4P18848 351 aaPredicted RBP7.83□□□□□ -1.16
KRT39-203ENST00000578078 NF2P35240 595 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 TXLNAP40222 546 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 CTSWP56202 376 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 SIK1P57059 783 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 GRIK3Q13003 919 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 SETDB1Q15047 1291 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 IQCB1Q15051 598 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 NECTIN1Q15223 517 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 LONRF2Q1L5Z9 754 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 PROX2Q3B8N5 592 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 VPS53Q5VIR6 699 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 AP1ARQ63HQ0 302 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 E4F1Q66K89 784 aaPredicted RBP7.83□□□□□ -1.16
KRT39-203ENST00000578078 CREB3L3Q68CJ9 461 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 FAM43BQ6ZT52 329 aaPredicted RBP7.83□□□□□ -1.16
KRT39-203ENST00000578078 CCDC144CPQ8IYA2 1237 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 CKAP2LQ8IYA6 745 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 KBTBD3Q8NAB2 608 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 ADAM32Q8TC27 787 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 ACSBG1Q96GR2 724 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 BPIFA3Q9BQP9 254 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 NAT10Q9H0A0 1025 aaKnown RBP7.83□□□□□ -1.16
KRT39-203ENST00000578078 SPATS2LQ9NUQ6 558 aaKnown RBP7.83□□□□□ -1.16
KRT39-203ENST00000578078 PAG1Q9NWQ8 432 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 MCM8Q9UJA3 840 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 LIMCH1Q9UPQ0 1083 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 DDX60Q8IY21 1712 aaKnown RBP7.83□□□□□ -1.16
KRT39-203ENST00000578078 SH3TC1Q8TE82 1336 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 LRP5O75197 1615 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms