RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 USP17L4A6NCW7 530 aa16.55■□□□□ 0.24
CUEDC1-206ENST00000577830 ITPK1Q13572 414 aa16.55■□□□□ 0.24
CUEDC1-206ENST00000577830 USP17L1Q7RTZ2 530 aa16.55■□□□□ 0.24
CUEDC1-206ENST00000577830 DZIP1Q86YF9 867 aaKnown RBP16.55■□□□□ 0.24
CUEDC1-206ENST00000577830 ZNF34Q8IZ26 560 aa16.55■□□□□ 0.24
CUEDC1-206ENST00000577830 CCDC148Q8NFR7 591 aa16.55■□□□□ 0.24
CUEDC1-206ENST00000577830 ZNF512BQ96KM6 892 aaPredicted RBP16.55■□□□□ 0.24
CUEDC1-206ENST00000577830 ZNF185O15231 689 aa16.55■□□□□ 0.24
CUEDC1-206ENST00000577830 PRPF3O43395 683 aaKnown RBP16.55■□□□□ 0.24
CUEDC1-206ENST00000577830 NT5DC1Q5TFE4 455 aa16.55■□□□□ 0.24
CUEDC1-206ENST00000577830 DTHD1Q6ZMT9 781 aa16.55■□□□□ 0.24
CUEDC1-206ENST00000577830 TMTC3Q6ZXV5 915 aa16.55■□□□□ 0.24
CUEDC1-206ENST00000577830 SMCR8Q8TEV9 937 aaPredicted RBP16.55■□□□□ 0.24
CUEDC1-206ENST00000577830 CELF1Q92879 486 aaKnown RBP16.55■□□□□ 0.24
CUEDC1-206ENST00000577830 MTRQ99707 1265 aa16.55■□□□□ 0.24
CUEDC1-206ENST00000577830 DUSP10Q9Y6W6 482 aa16.55■□□□□ 0.24
CUEDC1-206ENST00000577830 IDEP14735 1019 aa16.55■□□□□ 0.24
CUEDC1-206ENST00000577830 IL6STP40189 918 aaPredicted RBP16.55■□□□□ 0.24
CUEDC1-206ENST00000577830 ASIC1P78348 528 aa16.55■□□□□ 0.24
CUEDC1-206ENST00000577830 TROAPQ12815 778 aa16.55■□□□□ 0.24
CUEDC1-206ENST00000577830 IL17AQ16552 155 aa16.55■□□□□ 0.24
CUEDC1-206ENST00000577830 GPR101Q96P66 508 aaPredicted RBP16.55■□□□□ 0.24
CUEDC1-206ENST00000577830 ZNHIT6Q9NWK9 470 aaKnown RBP16.55■□□□□ 0.24
CUEDC1-206ENST00000577830 TBC1D8BQ0IIM8 1120 aa16.54■□□□□ 0.24
CUEDC1-206ENST00000577830 APTXQ7Z2E3 356 aaKnown RBP16.54■□□□□ 0.24
CUEDC1-206ENST00000577830 SLC51AQ86UW1 340 aa16.54■□□□□ 0.24
CUEDC1-206ENST00000577830 CSGALNACT2Q8N6G5 542 aa16.54■□□□□ 0.24
CUEDC1-206ENST00000577830 AGPAT5Q9NUQ2 364 aa16.54■□□□□ 0.24
CUEDC1-206ENST00000577830 LCMT1Q9UIC8 334 aa16.54■□□□□ 0.24
CUEDC1-206ENST00000577830 SSBP05455 408 aaKnown RBP eCLIP16.54■□□□□ 0.24
CUEDC1-206ENST00000577830 CXCR5P32302 372 aa16.54■□□□□ 0.24
CUEDC1-206ENST00000577830 CASP8Q14790 479 aa16.54■□□□□ 0.24
CUEDC1-206ENST00000577830 KCTD19Q17RG1 926 aaPredicted RBP16.54■□□□□ 0.24
CUEDC1-206ENST00000577830 FOXR1Q6PIV2 292 aa16.54■□□□□ 0.24
CUEDC1-206ENST00000577830 TANGO6Q9C0B7 1094 aa16.54■□□□□ 0.24
CUEDC1-206ENST00000577830 DEF6Q9H4E7 631 aa16.54■□□□□ 0.24
CUEDC1-206ENST00000577830 PKD1L3Q7Z443 1732 aa16.54■□□□□ 0.24
CUEDC1-206ENST00000577830 ATP1A1P05023 1023 aaKnown RBP16.53■□□□□ 0.24
CUEDC1-206ENST00000577830 STIM1Q13586 685 aa16.53■□□□□ 0.24
CUEDC1-206ENST00000577830 BRD3Q15059 726 aa16.53■□□□□ 0.24
CUEDC1-206ENST00000577830 CCDC96Q2M329 555 aa16.53■□□□□ 0.24
CUEDC1-206ENST00000577830 POLD4Q9HCU8 107 aa16.53■□□□□ 0.24
CUEDC1-206ENST00000577830 MYO5AQ9Y4I1 1855 aaKnown RBP16.53■□□□□ 0.24
CUEDC1-206ENST00000577830 BCL9O00512 1426 aa16.53■□□□□ 0.24
CUEDC1-206ENST00000577830 NDUFA10O95299 355 aa16.53■□□□□ 0.24
CUEDC1-206ENST00000577830 MECOMQ03112 1051 aa16.53■□□□□ 0.24
CUEDC1-206ENST00000577830 TTC19Q6DKK2 380 aaPredicted RBP16.53■□□□□ 0.24
CUEDC1-206ENST00000577830 NAA15Q9BXJ9 866 aaKnown RBP16.53■□□□□ 0.24
CUEDC1-206ENST00000577830 TMEM60Q9H2L4 133 aa16.53■□□□□ 0.24
CUEDC1-206ENST00000577830 TNS2Q63HR2 1409 aa16.53■□□□□ 0.24
CUEDC1-206ENST00000577830 RNASE9P60153 205 aaKnown RBP16.53■□□□□ 0.24
CUEDC1-206ENST00000577830 CDKAL1Q5VV42 579 aa16.53■□□□□ 0.24
CUEDC1-206ENST00000577830 KRT26Q7Z3Y9 468 aa16.53■□□□□ 0.24
CUEDC1-206ENST00000577830 CRNKL1Q9BZJ0 848 aaKnown RBP16.53■□□□□ 0.24
CUEDC1-206ENST00000577830 FAM207AQ9NSI2 230 aaPredicted RBP16.53■□□□□ 0.24
CUEDC1-206ENST00000577830 FAM205AQ6ZU69 1335 aa16.53■□□□□ 0.24
CUEDC1-206ENST00000577830 GTPBP6O43824 516 aaPredicted RBP16.52■□□□□ 0.24
CUEDC1-206ENST00000577830 BEND6Q5SZJ8 279 aaPredicted RBP16.52■□□□□ 0.24
CUEDC1-206ENST00000577830 DYMQ7RTS9 669 aa16.52■□□□□ 0.24
CUEDC1-206ENST00000577830 BLIDQ8IZY5 108 aa16.52■□□□□ 0.24
CUEDC1-206ENST00000577830 OR8K1Q8NGG5 319 aa16.52■□□□□ 0.24
CUEDC1-206ENST00000577830 RBM28Q9NW13 759 aaKnown RBP16.52■□□□□ 0.24
CUEDC1-206ENST00000577830 SMARCAL1Q9NZC9 954 aa16.52■□□□□ 0.24
CUEDC1-206ENST00000577830 PDE4DQ08499 809 aa16.52■□□□□ 0.24
CUEDC1-206ENST00000577830 MMS19Q96T76 1030 aa16.52■□□□□ 0.24
CUEDC1-206ENST00000577830 MMRN2Q9H8L6 949 aa16.52■□□□□ 0.24
CUEDC1-206ENST00000577830 ATP2C1P98194 919 aaPredicted RBP16.52■□□□□ 0.23
CUEDC1-206ENST00000577830 CNKSR2Q8WXI2 1034 aa16.52■□□□□ 0.23
CUEDC1-206ENST00000577830 JAKMIP2Q96AA8 810 aa16.52■□□□□ 0.23
CUEDC1-206ENST00000577830 PNPLA7Q6ZV29 1317 aa16.52■□□□□ 0.23
CUEDC1-206ENST00000577830 PSMA7O14818 248 aa16.51■□□□□ 0.23
CUEDC1-206ENST00000577830 DIXDC1Q155Q3 683 aa16.51■□□□□ 0.23
CUEDC1-206ENST00000577830 PTPROQ16827 1216 aa16.51■□□□□ 0.23
CUEDC1-206ENST00000577830 MYH15Q9Y2K3 1946 aa16.51■□□□□ 0.23
CUEDC1-206ENST00000577830 MARCH6O60337 910 aa16.51■□□□□ 0.23
CUEDC1-206ENST00000577830 EIF6P56537 245 aaKnown RBP16.51■□□□□ 0.23
CUEDC1-206ENST00000577830 ARID5AQ03989 594 aa16.51■□□□□ 0.23
CUEDC1-206ENST00000577830 SPAG1Q07617 926 aa16.51■□□□□ 0.23
CUEDC1-206ENST00000577830 C2orf54Q08AI8 447 aa16.51■□□□□ 0.23
CUEDC1-206ENST00000577830 INTS5Q6P9B9 1019 aaKnown RBP16.51■□□□□ 0.23
CUEDC1-206ENST00000577830 PNMA1Q8ND90 353 aa16.51■□□□□ 0.23
CUEDC1-206ENST00000577830 RIOK1Q9BRS2 568 aaKnown RBP16.51■□□□□ 0.23
CUEDC1-206ENST00000577830 SLC39A2Q9NP94 309 aa16.51■□□□□ 0.23
CUEDC1-206ENST00000577830 CWC15Q9P013 229 aaKnown RBP16.51■□□□□ 0.23
CUEDC1-206ENST00000577830 CCNT1O60563 726 aaKnown RBP16.51■□□□□ 0.23
CUEDC1-206ENST00000577830 BMP15O95972 392 aa16.51■□□□□ 0.23
CUEDC1-206ENST00000577830 TSPY3P0CV98 308 aa16.51■□□□□ 0.23
CUEDC1-206ENST00000577830 TSPY8P0CW00 308 aa16.51■□□□□ 0.23
CUEDC1-206ENST00000577830 TECP42680 631 aa16.51■□□□□ 0.23
CUEDC1-206ENST00000577830 ZNF658Q5TYW1 1059 aaPredicted RBP16.51■□□□□ 0.23
CUEDC1-206ENST00000577830 TYW1BQ6NUM6 668 aa16.51■□□□□ 0.23
CUEDC1-206ENST00000577830 FAM204AQ9H8W3 233 aa16.51■□□□□ 0.23
CUEDC1-206ENST00000577830 ANKIB1Q9P2G1 1089 aa16.51■□□□□ 0.23
CUEDC1-206ENST00000577830 RWDD2AQ9UIY3 292 aa16.51■□□□□ 0.23
CUEDC1-206ENST00000577830 SPATA31A1Q5TZJ5 1347 aa16.51■□□□□ 0.23
CUEDC1-206ENST00000577830 LRRIQ3A6PVS8 624 aaPredicted RBP16.5■□□□□ 0.23
CUEDC1-206ENST00000577830 FAM84BQ96KN1 310 aaPredicted RBP16.5■□□□□ 0.23
CUEDC1-206ENST00000577830 CRACR2AQ9BSW2 395 aa16.5■□□□□ 0.23
CUEDC1-206ENST00000577830 TMEM51Q9NW97 253 aa16.5■□□□□ 0.23
CUEDC1-206ENST00000577830 RMND1Q9NWS8 449 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms