RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 NLRC4Q9NPP4 1024 aa11.47□□□□□ -0.57
PTPRM-205ENST00000577827 CPSF2Q9P2I0 782 aaKnown RBP11.47□□□□□ -0.57
PTPRM-205ENST00000577827 BAIAP2L1Q9UHR4 511 aa11.47□□□□□ -0.57
PTPRM-205ENST00000577827 KDM3AQ9Y4C1 1321 aa11.47□□□□□ -0.57
PTPRM-205ENST00000577827 KIAA1210Q9ULL0 1709 aa11.47□□□□□ -0.57
PTPRM-205ENST00000577827 M0R2C6 588 aa11.47□□□□□ -0.57
PTPRM-205ENST00000577827 PTPREP23469 700 aa11.47□□□□□ -0.57
PTPRM-205ENST00000577827 CCZ1BP86790 482 aa11.47□□□□□ -0.57
PTPRM-205ENST00000577827 CCZ1P86791 482 aaPredicted RBP11.47□□□□□ -0.57
PTPRM-205ENST00000577827 OSBP2Q969R2 916 aa11.47□□□□□ -0.57
PTPRM-205ENST00000577827 AATFQ9NY61 560 aaKnown RBP eCLIP11.47□□□□□ -0.57
PTPRM-205ENST00000577827 NLRP1Q9C000 1473 aa11.46□□□□□ -0.57
PTPRM-205ENST00000577827 HECW2Q9P2P5 1572 aa11.46□□□□□ -0.57
PTPRM-205ENST00000577827 OR52Z1P0C646 297 aa11.46□□□□□ -0.57
PTPRM-205ENST00000577827 CYP2C19P33261 490 aa11.46□□□□□ -0.57
PTPRM-205ENST00000577827 ADD2P35612 726 aa11.46□□□□□ -0.57
PTPRM-205ENST00000577827 MXRA7P84157 204 aa11.46□□□□□ -0.57
PTPRM-205ENST00000577827 FYB2Q5VWT5 728 aa11.46□□□□□ -0.57
PTPRM-205ENST00000577827 SPATA24Q86W54 205 aa11.46□□□□□ -0.57
PTPRM-205ENST00000577827 ACRBPQ8NEB7 543 aa11.46□□□□□ -0.57
PTPRM-205ENST00000577827 KIFAP3Q92845 792 aa11.46□□□□□ -0.57
PTPRM-205ENST00000577827 THAP9Q9H5L6 903 aa11.46□□□□□ -0.57
PTPRM-205ENST00000577827 STK36Q9NRP7 1315 aa11.46□□□□□ -0.57
PTPRM-205ENST00000577827 ANO9A1A5B4 782 aa11.46□□□□□ -0.57
PTPRM-205ENST00000577827 KCNK3O14649 394 aa11.46□□□□□ -0.57
PTPRM-205ENST00000577827 NDC80O14777 642 aa11.46□□□□□ -0.57
PTPRM-205ENST00000577827 PCK1P35558 622 aa11.46□□□□□ -0.57
PTPRM-205ENST00000577827 RAD51AP2Q09MP3 1159 aa11.46□□□□□ -0.57
PTPRM-205ENST00000577827 VSIG1Q86XK7 387 aa11.46□□□□□ -0.57
PTPRM-205ENST00000577827 STMN2Q93045 179 aa11.46□□□□□ -0.57
PTPRM-205ENST00000577827 BZW2Q9Y6E2 419 aaKnown RBP11.46□□□□□ -0.57
PTPRM-205ENST00000577827 ABCC12Q96J65 1359 aa11.46□□□□□ -0.58
PTPRM-205ENST00000577827 CCDC169A6NNP5 214 aa11.46□□□□□ -0.58
PTPRM-205ENST00000577827 PDE8BO95263 885 aa11.46□□□□□ -0.58
PTPRM-205ENST00000577827 RASSF2P50749 326 aa11.46□□□□□ -0.58
PTPRM-205ENST00000577827 ICE2Q659A1 982 aa11.46□□□□□ -0.58
PTPRM-205ENST00000577827 DYMQ7RTS9 669 aa11.46□□□□□ -0.58
PTPRM-205ENST00000577827 WDR66Q8TBY9 1149 aa11.46□□□□□ -0.58
PTPRM-205ENST00000577827 CNOT6LQ96LI5 555 aaKnown RBP11.46□□□□□ -0.58
PTPRM-205ENST00000577827 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.46□□□□□ -0.58
PTPRM-205ENST00000577827 ZCCHC11Q5TAX3 1644 aaKnown RBP11.46□□□□□ -0.58
PTPRM-205ENST00000577827 A2ML1A8K2U0 1454 aa11.45□□□□□ -0.58
PTPRM-205ENST00000577827 KRIT1O00522 736 aa11.45□□□□□ -0.58
PTPRM-205ENST00000577827 ENC1O14682 589 aa11.45□□□□□ -0.58
PTPRM-205ENST00000577827 ST5P78524 1137 aa11.45□□□□□ -0.58
PTPRM-205ENST00000577827 SNCBQ16143 134 aa11.45□□□□□ -0.58
PTPRM-205ENST00000577827 TRIM31Q9BZY9 425 aa11.45□□□□□ -0.58
PTPRM-205ENST00000577827 ACTR5Q9H9F9 607 aaPredicted RBP11.45□□□□□ -0.58
PTPRM-205ENST00000577827 MRFAP1Q9Y605 127 aa11.45□□□□□ -0.58
PTPRM-205ENST00000577827 hCG_1642624A0A1W2PR95 340 aa11.45□□□□□ -0.58
PTPRM-205ENST00000577827 GUCY2DQ02846 1103 aa11.45□□□□□ -0.58
PTPRM-205ENST00000577827 ARMCX5Q6P1M9 558 aa11.45□□□□□ -0.58
PTPRM-205ENST00000577827 MMS22LQ6ZRQ5 1243 aa11.45□□□□□ -0.58
PTPRM-205ENST00000577827 ZNF365Q70YC5 407 aa11.45□□□□□ -0.58
PTPRM-205ENST00000577827 LSM14BQ9BX40 385 aaKnown RBP11.45□□□□□ -0.58
PTPRM-205ENST00000577827 EEF2P13639 858 aaKnown RBP11.45□□□□□ -0.58
PTPRM-205ENST00000577827 CABLES1Q8TDN4 633 aa11.45□□□□□ -0.58
PTPRM-205ENST00000577827 BICD1Q96G01 975 aa11.45□□□□□ -0.58
PTPRM-205ENST00000577827 IMPG2Q9BZV3 1241 aa11.45□□□□□ -0.58
PTPRM-205ENST00000577827 PXDNLA1KZ92 1463 aa11.45□□□□□ -0.58
PTPRM-205ENST00000577827 IQGAP1P46940 1657 aa11.45□□□□□ -0.58
PTPRM-205ENST00000577827 TRIM37O94972 964 aa11.45□□□□□ -0.58
PTPRM-205ENST00000577827 TADA2BQ86TJ2 420 aa11.45□□□□□ -0.58
PTPRM-205ENST00000577827 WHAMMQ8TF30 809 aa11.45□□□□□ -0.58
PTPRM-205ENST00000577827 P2RX5Q93086 422 aa11.45□□□□□ -0.58
PTPRM-205ENST00000577827 MTA3Q9BTC8 594 aa11.45□□□□□ -0.58
PTPRM-205ENST00000577827 CTTNBP2NLQ9P2B4 639 aa11.45□□□□□ -0.58
PTPRM-205ENST00000577827 TULP4Q9NRJ4 1543 aa11.44□□□□□ -0.58
PTPRM-205ENST00000577827 BCRP11274 1271 aa11.44□□□□□ -0.58
PTPRM-205ENST00000577827 STAT1P42224 750 aa11.44□□□□□ -0.58
PTPRM-205ENST00000577827 NT5C2P49902 561 aa11.44□□□□□ -0.58
PTPRM-205ENST00000577827 TFAP4Q01664 338 aa11.44□□□□□ -0.58
PTPRM-205ENST00000577827 PLCB3Q01970 1234 aa11.44□□□□□ -0.58
PTPRM-205ENST00000577827 GLE1Q53GS7 698 aaKnown RBP11.44□□□□□ -0.58
PTPRM-205ENST00000577827 E4F1Q66K89 784 aaPredicted RBP11.44□□□□□ -0.58
PTPRM-205ENST00000577827 TTLL7Q6ZT98 887 aa11.44□□□□□ -0.58
PTPRM-205ENST00000577827 ARHGAP24Q8N264 748 aa11.44□□□□□ -0.58
PTPRM-205ENST00000577827 DNM3Q9UQ16 869 aa11.44□□□□□ -0.58
PTPRM-205ENST00000577827 H2AFZP0C0S5 128 aa11.44□□□□□ -0.58
PTPRM-205ENST00000577827 H2AFVQ71UI9 128 aa11.44□□□□□ -0.58
PTPRM-205ENST00000577827 TEX11Q8IYF3 940 aa11.44□□□□□ -0.58
PTPRM-205ENST00000577827 VCXQ9H320 206 aa11.44□□□□□ -0.58
PTPRM-205ENST00000577827 LMTK2Q8IWU2 1503 aa11.44□□□□□ -0.58
PTPRM-205ENST00000577827 USP17L12C9JPN9 530 aa11.44□□□□□ -0.58
PTPRM-205ENST00000577827 USP17L21D6R901 530 aa11.44□□□□□ -0.58
PTPRM-205ENST00000577827 RCAN1P53805 252 aa11.44□□□□□ -0.58
PTPRM-205ENST00000577827 ARL6IP4Q66PJ3 421 aaKnown RBP11.44□□□□□ -0.58
PTPRM-205ENST00000577827 MCTP2Q6DN12 878 aa11.44□□□□□ -0.58
PTPRM-205ENST00000577827 NYAP1Q6ZVC0 841 aa11.44□□□□□ -0.58
PTPRM-205ENST00000577827 NEK8Q86SG6 692 aa11.44□□□□□ -0.58
PTPRM-205ENST00000577827 PAGE5Q96GU1 130 aa11.44□□□□□ -0.58
PTPRM-205ENST00000577827 METTL14Q9HCE5 456 aaKnown RBP11.44□□□□□ -0.58
PTPRM-205ENST00000577827 FAM114A2Q9NRY5 505 aa11.44□□□□□ -0.58
PTPRM-205ENST00000577827 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.44□□□□□ -0.58
PTPRM-205ENST00000577827 ROBO2Q9HCK4 1378 aa11.44□□□□□ -0.58
PTPRM-205ENST00000577827 B4DLN1 442 aa11.44□□□□□ -0.58
PTPRM-205ENST00000577827 MAN2A1Q16706 1144 aa11.44□□□□□ -0.58
PTPRM-205ENST00000577827 TOGARAM2Q6ZUX3 1019 aa11.44□□□□□ -0.58
PTPRM-205ENST00000577827 DNAJC10Q8IXB1 793 aa11.44□□□□□ -0.58
PTPRM-205ENST00000577827 CMTR1Q8N1G2 835 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms