RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 CCNA1P78396 465 aa8.39□□□□□ -1.07
SMARCE1-212ENST00000577721 SHROOM1Q2M3G4 852 aaPredicted RBP8.39□□□□□ -1.07
SMARCE1-212ENST00000577721 KANK3Q6NY19 840 aa8.39□□□□□ -1.07
SMARCE1-212ENST00000577721 FEZ1Q99689 392 aa8.39□□□□□ -1.07
SMARCE1-212ENST00000577721 APBA2Q99767 749 aa8.39□□□□□ -1.07
SMARCE1-212ENST00000577721 GINM1Q9NU53 330 aa8.39□□□□□ -1.07
SMARCE1-212ENST00000577721 ZBTB21Q9ULJ3 1066 aa8.39□□□□□ -1.07
SMARCE1-212ENST00000577721 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.39□□□□□ -1.07
SMARCE1-212ENST00000577721 FLT1P17948 1338 aa8.38□□□□□ -1.07
SMARCE1-212ENST00000577721 USP17L15C9J2P7 530 aa8.38□□□□□ -1.07
SMARCE1-212ENST00000577721 USP17L13C9JLJ4 530 aa8.38□□□□□ -1.07
SMARCE1-212ENST00000577721 USP17L11C9JVI0 530 aa8.38□□□□□ -1.07
SMARCE1-212ENST00000577721 USP17L18D6R9N7 530 aa8.38□□□□□ -1.07
SMARCE1-212ENST00000577721 USP17L22D6RA61 530 aa8.38□□□□□ -1.07
SMARCE1-212ENST00000577721 USP17L17D6RBQ6 530 aa8.38□□□□□ -1.07
SMARCE1-212ENST00000577721 USP17L19D6RCP7 530 aa8.38□□□□□ -1.07
SMARCE1-212ENST00000577721 USP17L20D6RJB6 530 aa8.38□□□□□ -1.07
SMARCE1-212ENST00000577721 GH2P01242 217 aa8.38□□□□□ -1.07
SMARCE1-212ENST00000577721 CT47B1P0C2W7 299 aaPredicted RBP8.38□□□□□ -1.07
SMARCE1-212ENST00000577721 COL6A1P12109 1028 aa8.38□□□□□ -1.07
SMARCE1-212ENST00000577721 USP5P45974 858 aa8.38□□□□□ -1.07
SMARCE1-212ENST00000577721 USP17L24Q0WX57 530 aa8.38□□□□□ -1.07
SMARCE1-212ENST00000577721 MAP2K5Q13163 448 aa8.38□□□□□ -1.07
SMARCE1-212ENST00000577721 RAB3GAP1Q15042 981 aa8.38□□□□□ -1.07
SMARCE1-212ENST00000577721 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.38□□□□□ -1.07
SMARCE1-212ENST00000577721 USP6NLQ92738 828 aa8.38□□□□□ -1.07
SMARCE1-212ENST00000577721 COL25A1Q9BXS0 654 aaPredicted RBP8.38□□□□□ -1.07
SMARCE1-212ENST00000577721 KRTAP4-8Q9BYQ9 185 aa8.38□□□□□ -1.07
SMARCE1-212ENST00000577721 RABGAP1Q9Y3P9 1069 aa8.38□□□□□ -1.07
SMARCE1-212ENST00000577721 IVNS1ABPQ9Y6Y0 642 aa8.38□□□□□ -1.07
SMARCE1-212ENST00000577721 SLC15A5A6NIM6 579 aa8.37□□□□□ -1.07
SMARCE1-212ENST00000577721 IPO8O15397 1037 aaKnown RBP8.37□□□□□ -1.07
SMARCE1-212ENST00000577721 CYP7A1P22680 504 aa8.37□□□□□ -1.07
SMARCE1-212ENST00000577721 RARSP54136 660 aaKnown RBP8.37□□□□□ -1.07
SMARCE1-212ENST00000577721 DYNLL1P63167 89 aaKnown RBP8.37□□□□□ -1.07
SMARCE1-212ENST00000577721 MTX1Q13505 466 aa8.37□□□□□ -1.07
SMARCE1-212ENST00000577721 DPP9Q86TI2 863 aa8.37□□□□□ -1.07
SMARCE1-212ENST00000577721 SVOPQ8N4V2 548 aa8.37□□□□□ -1.07
SMARCE1-212ENST00000577721 FRAT1Q92837 279 aaPredicted RBP8.37□□□□□ -1.07
SMARCE1-212ENST00000577721 CNTNAP3BQ96NU0 1288 aa8.37□□□□□ -1.07
SMARCE1-212ENST00000577721 CNTNAP3Q9BZ76 1288 aa8.37□□□□□ -1.07
SMARCE1-212ENST00000577721 DNAJC18Q9H819 358 aa8.37□□□□□ -1.07
SMARCE1-212ENST00000577721 CABP5Q9NP86 173 aa8.37□□□□□ -1.07
SMARCE1-212ENST00000577721 DDX20Q9UHI6 824 aaKnown RBP8.37□□□□□ -1.07
SMARCE1-212ENST00000577721 ATP11BQ9Y2G3 1177 aa8.37□□□□□ -1.07
SMARCE1-212ENST00000577721 COL2A1P02458 1487 aaPredicted RBP8.37□□□□□ -1.07
SMARCE1-212ENST00000577721 PNMA6EA0A0J9YXQ4 647 aa8.36□□□□□ -1.07
SMARCE1-212ENST00000577721 MSCO60682 206 aa8.36□□□□□ -1.07
SMARCE1-212ENST00000577721 IDH1O75874 414 aaKnown RBP8.36□□□□□ -1.07
SMARCE1-212ENST00000577721 CYP2E1P05181 493 aaPredicted RBP8.36□□□□□ -1.07
SMARCE1-212ENST00000577721 CYP2C19P33261 490 aa8.36□□□□□ -1.07
SMARCE1-212ENST00000577721 ZAP70P43403 619 aa8.36□□□□□ -1.07
SMARCE1-212ENST00000577721 USP14P54578 494 aa8.36□□□□□ -1.07
SMARCE1-212ENST00000577721 RTP1P59025 263 aa8.36□□□□□ -1.07
SMARCE1-212ENST00000577721 NNTQ13423 1086 aa8.36□□□□□ -1.07
SMARCE1-212ENST00000577721 ABCB5Q2M3G0 1257 aa8.36□□□□□ -1.07
SMARCE1-212ENST00000577721 CERKLQ49MI3 558 aaPredicted RBP8.36□□□□□ -1.07
SMARCE1-212ENST00000577721 TNNI3KQ59H18 835 aa8.36□□□□□ -1.07
SMARCE1-212ENST00000577721 GJC2Q5T442 439 aaPredicted RBP8.36□□□□□ -1.07
SMARCE1-212ENST00000577721 FAM109BQ6ICB4 259 aaPredicted RBP8.36□□□□□ -1.07
SMARCE1-212ENST00000577721 CATSPERGQ6ZRH7 1159 aa8.36□□□□□ -1.07
SMARCE1-212ENST00000577721 ADGRA1Q86SQ6 560 aa8.36□□□□□ -1.07
SMARCE1-212ENST00000577721 METTL16Q86W50 562 aaKnown RBP8.36□□□□□ -1.07
SMARCE1-212ENST00000577721 TRMT2AQ8IZ69 625 aaKnown RBP8.36□□□□□ -1.07
SMARCE1-212ENST00000577721 MIGA1Q8NAN2 632 aa8.36□□□□□ -1.07
SMARCE1-212ENST00000577721 ARRDC4Q8NCT1 418 aa8.36□□□□□ -1.07
SMARCE1-212ENST00000577721 ARHGAP45Q92619 1136 aa8.36□□□□□ -1.07
SMARCE1-212ENST00000577721 LPAR1Q92633 364 aa8.36□□□□□ -1.07
SMARCE1-212ENST00000577721 CLUAP1Q96AJ1 413 aa8.36□□□□□ -1.07
SMARCE1-212ENST00000577721 DBNDD2Q9BQY9 259 aa8.36□□□□□ -1.07
SMARCE1-212ENST00000577721 PRDM5Q9NQX1 630 aaPredicted RBP8.36□□□□□ -1.07
SMARCE1-212ENST00000577721 FLRT1Q9NZU1 646 aa8.36□□□□□ -1.07
SMARCE1-212ENST00000577721 FPGT-TNNI3KV9GXZ4 949 aa8.36□□□□□ -1.07
SMARCE1-212ENST00000577721 MGAMO43451 1857 aa8.35□□□□□ -1.07
SMARCE1-212ENST00000577721 KBTBD13C9JR72 458 aa8.35□□□□□ -1.07
SMARCE1-212ENST00000577721 DNM1LO00429 736 aa8.35□□□□□ -1.07
SMARCE1-212ENST00000577721 SURF6O75683 361 aaKnown RBP8.35□□□□□ -1.07
SMARCE1-212ENST00000577721 CNMDO75829 334 aa8.35□□□□□ -1.07
SMARCE1-212ENST00000577721 ADH1CP00326 375 aa8.35□□□□□ -1.07
SMARCE1-212ENST00000577721 MARSP56192 900 aaKnown RBP8.35□□□□□ -1.07
SMARCE1-212ENST00000577721 WDR4P57081 412 aaKnown RBP8.35□□□□□ -1.07
SMARCE1-212ENST00000577721 ANO1Q5XXA6 986 aa8.35□□□□□ -1.07
SMARCE1-212ENST00000577721 TTC6Q86TZ1 520 aa8.35□□□□□ -1.07
SMARCE1-212ENST00000577721 NPLOC4Q8TAT6 608 aa8.35□□□□□ -1.07
SMARCE1-212ENST00000577721 NLRP7Q8WX94 980 aa8.35□□□□□ -1.07
SMARCE1-212ENST00000577721 GUCD1Q96NT3 240 aa8.35□□□□□ -1.07
SMARCE1-212ENST00000577721 RPAP3Q9H6T3 665 aaPredicted RBP8.35□□□□□ -1.07
SMARCE1-212ENST00000577721 PIH1D3Q9NQM4 214 aaKnown RBP8.35□□□□□ -1.07
SMARCE1-212ENST00000577721 BTBD7Q9P203 1132 aa8.35□□□□□ -1.07
SMARCE1-212ENST00000577721 SERPINB13Q9UIV8 391 aa8.35□□□□□ -1.07
SMARCE1-212ENST00000577721 DOCK2Q92608 1830 aa8.35□□□□□ -1.07
SMARCE1-212ENST00000577721 MYH2Q9UKX2 1941 aa8.35□□□□□ -1.07
SMARCE1-212ENST00000577721 DOCK1Q14185 1865 aa8.34□□□□□ -1.07
SMARCE1-212ENST00000577721 MPHOSPH10O00566 681 aaKnown RBP8.34□□□□□ -1.07
SMARCE1-212ENST00000577721 BCAR3O75815 825 aa8.34□□□□□ -1.07
SMARCE1-212ENST00000577721 POLR3DP05423 398 aaPredicted RBP8.34□□□□□ -1.07
SMARCE1-212ENST00000577721 JUNDP17535 347 aa8.34□□□□□ -1.07
SMARCE1-212ENST00000577721 VCAM1P19320 739 aa8.34□□□□□ -1.07
SMARCE1-212ENST00000577721 SH3BP2P78314 561 aa8.34□□□□□ -1.07
SMARCE1-212ENST00000577721 PLS1Q14651 629 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms