RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 RNPC3Q96LT9 517 aaKnown RBP16.96■□□□□ 0.31
SMARCD2-205ENST00000577686 TOX2Q96NM4 488 aa16.96■□□□□ 0.31
SMARCD2-205ENST00000577686 GUCD1Q96NT3 240 aa16.96■□□□□ 0.31
SMARCD2-205ENST00000577686 STRBPQ96SI9 672 aaKnown RBP16.96■□□□□ 0.31
SMARCD2-205ENST00000577686 TMEM39AQ9NV64 488 aa16.96■□□□□ 0.31
SMARCD2-205ENST00000577686 ZHX1Q9UKY1 873 aaPredicted RBP16.96■□□□□ 0.31
SMARCD2-205ENST00000577686 LTBP2Q14767 1821 aa16.96■□□□□ 0.3
SMARCD2-205ENST00000577686 ATP2A1O14983 1001 aa16.95■□□□□ 0.3
SMARCD2-205ENST00000577686 APPP05067 770 aa16.95■□□□□ 0.3
SMARCD2-205ENST00000577686 FPGSQ05932 587 aa16.95■□□□□ 0.3
SMARCD2-205ENST00000577686 SLFNL1Q499Z3 407 aa16.95■□□□□ 0.3
SMARCD2-205ENST00000577686 ANKRD35Q8N283 1001 aa16.95■□□□□ 0.3
SMARCD2-205ENST00000577686 REPS2Q8NFH8 660 aa16.95■□□□□ 0.3
SMARCD2-205ENST00000577686 GLT1D1Q96MS3 346 aa16.95■□□□□ 0.3
SMARCD2-205ENST00000577686 FEM1BQ9UK73 627 aa16.95■□□□□ 0.3
SMARCD2-205ENST00000577686 TRIM43BA6NCK2 446 aa16.94■□□□□ 0.3
SMARCD2-205ENST00000577686 KIAA0355O15063 1070 aa16.94■□□□□ 0.3
SMARCD2-205ENST00000577686 RNF113AO15541 343 aaKnown RBP16.94■□□□□ 0.3
SMARCD2-205ENST00000577686 NDUFB10O96000 172 aa16.94■□□□□ 0.3
SMARCD2-205ENST00000577686 ZNF865P0CJ78 1059 aaPredicted RBP16.94■□□□□ 0.3
SMARCD2-205ENST00000577686 RASA1P20936 1047 aa16.94■□□□□ 0.3
SMARCD2-205ENST00000577686 SLC4A3P48751 1232 aa16.94■□□□□ 0.3
SMARCD2-205ENST00000577686 ACLYP53396 1101 aa16.94■□□□□ 0.3
SMARCD2-205ENST00000577686 OAZ1P54368 228 aa16.94■□□□□ 0.3
SMARCD2-205ENST00000577686 PDE4BQ07343 736 aa16.94■□□□□ 0.3
SMARCD2-205ENST00000577686 C9orf50Q5SZB4 431 aa16.94■□□□□ 0.3
SMARCD2-205ENST00000577686 MAMDC4Q6UXC1 1216 aa16.94■□□□□ 0.3
SMARCD2-205ENST00000577686 CHST13Q8NET6 341 aa16.94■□□□□ 0.3
SMARCD2-205ENST00000577686 TRIM43Q96BQ3 446 aaPredicted RBP16.94■□□□□ 0.3
SMARCD2-205ENST00000577686 CLIP2Q9UDT6 1046 aa16.94■□□□□ 0.3
SMARCD2-205ENST00000577686 ISY1Q9ULR0 285 aaKnown RBP16.94■□□□□ 0.3
SMARCD2-205ENST00000577686 BAZ2AQ9UIF9 1905 aaKnown RBP16.94■□□□□ 0.3
SMARCD2-205ENST00000577686 GSG1L2A8MUP6 293 aa16.93■□□□□ 0.3
SMARCD2-205ENST00000577686 ERC2O15083 957 aa16.93■□□□□ 0.3
SMARCD2-205ENST00000577686 DUSP11O75319 330 aaKnown RBP16.93■□□□□ 0.3
SMARCD2-205ENST00000577686 TTLL1O95922 423 aa16.93■□□□□ 0.3
SMARCD2-205ENST00000577686 ANKRD33Q7Z3H0 272 aa16.93■□□□□ 0.3
SMARCD2-205ENST00000577686 CPXCR1Q8N123 301 aa16.93■□□□□ 0.3
SMARCD2-205ENST00000577686 MAFAQ8NHW3 353 aaPredicted RBP16.93■□□□□ 0.3
SMARCD2-205ENST00000577686 KIFC2Q96AC6 838 aa16.93■□□□□ 0.3
SMARCD2-205ENST00000577686 CDX2Q99626 313 aaPredicted RBP16.93■□□□□ 0.3
SMARCD2-205ENST00000577686 SEMA6BQ9H3T3 888 aa16.93■□□□□ 0.3
SMARCD2-205ENST00000577686 ABHD16BQ9H3Z7 469 aa16.93■□□□□ 0.3
SMARCD2-205ENST00000577686 MYH7P12883 1935 aa16.93■□□□□ 0.3
SMARCD2-205ENST00000577686 SYNRGQ9UMZ2 1314 aa16.93■□□□□ 0.3
SMARCD2-205ENST00000577686 TLR3O15455 904 aaKnown RBP16.92■□□□□ 0.3
SMARCD2-205ENST00000577686 GPAA1O43292 621 aa16.92■□□□□ 0.3
SMARCD2-205ENST00000577686 ADAMTS4O75173 837 aa16.92■□□□□ 0.3
SMARCD2-205ENST00000577686 TSPY3P0CV98 308 aa16.92■□□□□ 0.3
SMARCD2-205ENST00000577686 TSPY8P0CW00 308 aa16.92■□□□□ 0.3
SMARCD2-205ENST00000577686 FOSL2P15408 326 aa16.92■□□□□ 0.3
SMARCD2-205ENST00000577686 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.92■□□□□ 0.3
SMARCD2-205ENST00000577686 SH3RF1Q7Z6J0 888 aa16.92■□□□□ 0.3
SMARCD2-205ENST00000577686 STK11IPQ8N1F8 1099 aa16.92■□□□□ 0.3
SMARCD2-205ENST00000577686 GMCL1P1Q8NEA9 526 aa16.92■□□□□ 0.3
SMARCD2-205ENST00000577686 VTI1AQ96AJ9 217 aa16.92■□□□□ 0.3
SMARCD2-205ENST00000577686 NUP88Q99567 741 aaPredicted RBP16.92■□□□□ 0.3
SMARCD2-205ENST00000577686 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.92■□□□□ 0.3
SMARCD2-205ENST00000577686 ELP1O95163 1332 aa16.92■□□□□ 0.3
SMARCD2-205ENST00000577686 LAMA3Q16787 3333 aa16.91■□□□□ 0.3
SMARCD2-205ENST00000577686 PARP14Q460N5 1801 aa16.91■□□□□ 0.3
SMARCD2-205ENST00000577686 SMARCA5O60264 1052 aaPredicted RBP16.91■□□□□ 0.3
SMARCD2-205ENST00000577686 TAL1P17542 331 aaPredicted RBP16.91■□□□□ 0.3
SMARCD2-205ENST00000577686 CST5P28325 142 aaPredicted RBP16.91■□□□□ 0.3
SMARCD2-205ENST00000577686 IKQ13123 557 aaPredicted RBP16.91■□□□□ 0.3
SMARCD2-205ENST00000577686 PPIGQ13427 754 aaKnown RBP eCLIP16.91■□□□□ 0.31e-6■□□□□ 8.9
SMARCD2-205ENST00000577686 ACVR2BQ13705 512 aa16.91■□□□□ 0.3
SMARCD2-205ENST00000577686 FAM160B2Q86V87 743 aa16.91■□□□□ 0.3
SMARCD2-205ENST00000577686 MKL1Q969V6 931 aa16.91■□□□□ 0.3
SMARCD2-205ENST00000577686 SLC38A10Q9HBR0 1119 aa16.91■□□□□ 0.3
SMARCD2-205ENST00000577686 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.91■□□□□ 0.3
SMARCD2-205ENST00000577686 DNAJC25-GNG10A0A024R161 153 aa16.9■□□□□ 0.3
SMARCD2-205ENST00000577686 A0A0U1RQG5 324 aaPredicted RBP16.9■□□□□ 0.3
SMARCD2-205ENST00000577686 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.9■□□□□ 0.3
SMARCD2-205ENST00000577686 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.9■□□□□ 0.3
SMARCD2-205ENST00000577686 SMIM22K7EJ46 135 aa16.9■□□□□ 0.3
SMARCD2-205ENST00000577686 CHGBP05060 677 aa16.9■□□□□ 0.3
SMARCD2-205ENST00000577686 C6orf222P0C671 652 aaPredicted RBP16.9■□□□□ 0.3
SMARCD2-205ENST00000577686 BMP3P12645 472 aa16.9■□□□□ 0.3
SMARCD2-205ENST00000577686 KCNA10Q16322 511 aa16.9■□□□□ 0.3
SMARCD2-205ENST00000577686 KLHDC9Q8NEP7 349 aa16.9■□□□□ 0.3
SMARCD2-205ENST00000577686 CHURC1Q8WUH1 139 aa16.9■□□□□ 0.3
SMARCD2-205ENST00000577686 OSBP2Q969R2 916 aa16.9■□□□□ 0.3
SMARCD2-205ENST00000577686 NAPBQ9H115 298 aa16.9■□□□□ 0.3
SMARCD2-205ENST00000577686 ACAD9Q9H845 621 aa16.9■□□□□ 0.3
SMARCD2-205ENST00000577686 RAVER2Q9HCJ3 691 aaKnown RBP16.9■□□□□ 0.3
SMARCD2-205ENST00000577686 MTMR4Q9NYA4 1195 aa16.9■□□□□ 0.3
SMARCD2-205ENST00000577686 ZBTB47Q9UFB7 747 aaPredicted RBP16.9■□□□□ 0.3
SMARCD2-205ENST00000577686 COL11A1P12107 1806 aaPredicted RBP16.89■□□□□ 0.29
SMARCD2-205ENST00000577686 IGKV6D-41A0A0C4DH26 115 aa16.89■□□□□ 0.29
SMARCD2-205ENST00000577686 PATL2C9JE40 543 aaKnown RBP16.89■□□□□ 0.29
SMARCD2-205ENST00000577686 SNAI1O95863 264 aaPredicted RBP16.89■□□□□ 0.29
SMARCD2-205ENST00000577686 TIMP1P01033 207 aa16.89■□□□□ 0.29
SMARCD2-205ENST00000577686 STAT2P52630 851 aa16.89■□□□□ 0.29
SMARCD2-205ENST00000577686 TKFCQ3LXA3 575 aa16.89■□□□□ 0.29
SMARCD2-205ENST00000577686 SLFN13Q68D06 897 aa16.89■□□□□ 0.29
SMARCD2-205ENST00000577686 TMEM199Q8N511 208 aa16.89■□□□□ 0.29
SMARCD2-205ENST00000577686 SYMPKQ92797 1274 aaKnown RBP16.89■□□□□ 0.29
SMARCD2-205ENST00000577686 CEP95Q96GE4 821 aa16.89■□□□□ 0.29
SMARCD2-205ENST00000577686 COL25A1Q9BXS0 654 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms