RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 PI4KBQ9UBF8 816 aa15.72■□□□□ 0.11
RNF43-202ENST00000577625 ZBTB12Q9Y330 459 aaPredicted RBP15.72■□□□□ 0.11
RNF43-202ENST00000577625 A0A1B0GVL5 298 aa15.72■□□□□ 0.11
RNF43-202ENST00000577625 FAM196BA6NMK8 535 aa15.72■□□□□ 0.11
RNF43-202ENST00000577625 KLRF2D3W0D1 207 aa15.72■□□□□ 0.11
RNF43-202ENST00000577625 PARP1P09874 1014 aaKnown RBP15.72■□□□□ 0.11
RNF43-202ENST00000577625 PTGS1P23219 599 aa15.72■□□□□ 0.11
RNF43-202ENST00000577625 MARCKSP29966 332 aaPredicted RBP15.72■□□□□ 0.11
RNF43-202ENST00000577625 TNFRSF25Q93038 417 aa15.72■□□□□ 0.11
RNF43-202ENST00000577625 LZTS2Q9BRK4 669 aa15.72■□□□□ 0.11
RNF43-202ENST00000577625 SPZ1Q9BXG8 430 aa15.72■□□□□ 0.11
RNF43-202ENST00000577625 BRMS1Q9HCU9 246 aa15.72■□□□□ 0.11
RNF43-202ENST00000577625 MRVI1Q9Y6F6 885 aa15.72■□□□□ 0.11
RNF43-202ENST00000577625 FAM205CA6NFA0 338 aa15.71■□□□□ 0.11
RNF43-202ENST00000577625 NFKBIEO00221 500 aa15.71■□□□□ 0.11
RNF43-202ENST00000577625 NDUFA8P51970 172 aa15.71■□□□□ 0.11
RNF43-202ENST00000577625 EIF6P56537 245 aaKnown RBP15.71■□□□□ 0.11
RNF43-202ENST00000577625 EARS2Q5JPH6 523 aaKnown RBP15.71■□□□□ 0.11
RNF43-202ENST00000577625 USP17L2Q6R6M4 530 aa15.71■□□□□ 0.11
RNF43-202ENST00000577625 ZSCAN29Q8IWY8 852 aaPredicted RBP15.71■□□□□ 0.11
RNF43-202ENST00000577625 LRRC47Q8N1G4 583 aaKnown RBP15.71■□□□□ 0.11
RNF43-202ENST00000577625 UPF1Q92900 1129 aaKnown RBP eCLIP15.71■□□□□ 0.11
RNF43-202ENST00000577625 CD2APQ9Y5K6 639 aa15.71■□□□□ 0.11
RNF43-202ENST00000577625 TTLL1O95922 423 aa15.7■□□□□ 0.1
RNF43-202ENST00000577625 PDHBP11177 359 aa15.7■□□□□ 0.1
RNF43-202ENST00000577625 PTGER2P43116 358 aa15.7■□□□□ 0.1
RNF43-202ENST00000577625 METTL16Q86W50 562 aaKnown RBP15.7■□□□□ 0.1
RNF43-202ENST00000577625 CCDC17Q96LX7 622 aa15.7■□□□□ 0.1
RNF43-202ENST00000577625 CABP5Q9NP86 173 aa15.7■□□□□ 0.1
RNF43-202ENST00000577625 HDAC9Q9UKV0 1011 aa15.7■□□□□ 0.1
RNF43-202ENST00000577625 PSDA5PKW4 1024 aaPredicted RBP15.7■□□□□ 0.1
RNF43-202ENST00000577625 USP17L5A8MUK1 530 aa15.7■□□□□ 0.1
RNF43-202ENST00000577625 CUTAO60888 179 aa15.7■□□□□ 0.1
RNF43-202ENST00000577625 CXCL9Q07325 125 aa15.7■□□□□ 0.1
RNF43-202ENST00000577625 BMS1Q14692 1282 aaKnown RBP15.7■□□□□ 0.1
RNF43-202ENST00000577625 AGBL3Q8NEM8 1001 aa15.7■□□□□ 0.1
RNF43-202ENST00000577625 GPKOWQ92917 476 aaPredicted RBP eCLIP15.7■□□□□ 0.1
RNF43-202ENST00000577625 TRERF1Q96PN7 1200 aa15.7■□□□□ 0.1
RNF43-202ENST00000577625 RASSF4Q9H2L5 321 aa15.7■□□□□ 0.1
RNF43-202ENST00000577625 CPVLQ9H3G5 476 aa15.7■□□□□ 0.1
RNF43-202ENST00000577625 SH3GLB2Q9NR46 395 aa15.7■□□□□ 0.1
RNF43-202ENST00000577625 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.7■□□□□ 0.1
RNF43-202ENST00000577625 FAM237AA0A1B0GTK4 181 aa15.69■□□□□ 0.1
RNF43-202ENST00000577625 MPHOSPH10O00566 681 aaKnown RBP15.69■□□□□ 0.1
RNF43-202ENST00000577625 SNHG28P0DPA3 235 aa15.69■□□□□ 0.1
RNF43-202ENST00000577625 DLGAP5Q15398 846 aa15.69■□□□□ 0.1
RNF43-202ENST00000577625 MUM1L1Q5H9M0 696 aa15.69■□□□□ 0.1
RNF43-202ENST00000577625 TATDN1Q6P1N9 297 aa15.69■□□□□ 0.1
RNF43-202ENST00000577625 FBXO38Q6PIJ6 1188 aa15.69■□□□□ 0.1
RNF43-202ENST00000577625 OGFOD1Q8N543 542 aa15.69■□□□□ 0.1
RNF43-202ENST00000577625 FAM200AQ8TCP9 573 aa15.69■□□□□ 0.1
RNF43-202ENST00000577625 CLIP2Q9UDT6 1046 aa15.69■□□□□ 0.1
RNF43-202ENST00000577625 CEP131Q9UPN4 1083 aa15.69■□□□□ 0.1
RNF43-202ENST00000577625 PCDHB6Q9Y5E3 794 aa15.69■□□□□ 0.1
RNF43-202ENST00000577625 ADAMTS3O15072 1205 aa15.69■□□□□ 0.1
RNF43-202ENST00000577625 PFKFB1P16118 471 aa15.69■□□□□ 0.1
RNF43-202ENST00000577625 NLRP5P59047 1200 aa15.69■□□□□ 0.1
RNF43-202ENST00000577625 SHROOM1Q2M3G4 852 aaPredicted RBP15.69■□□□□ 0.1
RNF43-202ENST00000577625 NOM1Q5C9Z4 860 aaKnown RBP15.69■□□□□ 0.1
RNF43-202ENST00000577625 CEP135Q66GS9 1140 aa15.69■□□□□ 0.1
RNF43-202ENST00000577625 WWC2Q6AWC2 1192 aa15.69■□□□□ 0.1
RNF43-202ENST00000577625 TYW1BQ6NUM6 668 aa15.69■□□□□ 0.1
RNF43-202ENST00000577625 FOXP4Q8IVH2 680 aaPredicted RBP15.69■□□□□ 0.1
RNF43-202ENST00000577625 ERO1AQ96HE7 468 aa15.69■□□□□ 0.1
RNF43-202ENST00000577625 ZNF70Q9UC06 446 aaPredicted RBP15.69■□□□□ 0.1
RNF43-202ENST00000577625 HPSEQ9Y251 543 aa15.69■□□□□ 0.1
RNF43-202ENST00000577625 CLRN2A0PK11 232 aa15.68■□□□□ 0.1
RNF43-202ENST00000577625 CALML3P27482 149 aa15.68■□□□□ 0.1
RNF43-202ENST00000577625 SMARCA1P28370 1054 aa15.68■□□□□ 0.1
RNF43-202ENST00000577625 CERKLQ49MI3 558 aaPredicted RBP15.68■□□□□ 0.1
RNF43-202ENST00000577625 RESP18Q5W5W9 173 aa15.68■□□□□ 0.1
RNF43-202ENST00000577625 SHC4Q6S5L8 630 aa15.68■□□□□ 0.1
RNF43-202ENST00000577625 FAM177A1Q8N128 213 aaPredicted RBP15.68■□□□□ 0.1
RNF43-202ENST00000577625 KRI1Q8N9T8 703 aaKnown RBP15.68■□□□□ 0.1
RNF43-202ENST00000577625 TMOD2Q9NZR1 351 aa15.68■□□□□ 0.1
RNF43-202ENST00000577625 RSPH14Q9UHP6 348 aa15.68■□□□□ 0.1
RNF43-202ENST00000577625 BCS1LQ9Y276 419 aa15.68■□□□□ 0.1
RNF43-202ENST00000577625 ZNF202O95125 648 aa15.68■□□□□ 0.1
RNF43-202ENST00000577625 CAVIN2O95810 425 aa15.68■□□□□ 0.1
RNF43-202ENST00000577625 NOP2P46087 812 aaKnown RBP15.68■□□□□ 0.1
RNF43-202ENST00000577625 TPD52L1Q16890 204 aaPredicted RBP15.68■□□□□ 0.1
RNF43-202ENST00000577625 SPDYE2Q495Y8 402 aa15.68■□□□□ 0.1
RNF43-202ENST00000577625 ASPRV1Q53RT3 343 aa15.68■□□□□ 0.1
RNF43-202ENST00000577625 MTMR14Q8NCE2 650 aa15.68■□□□□ 0.1
RNF43-202ENST00000577625 ST7Q9NRC1 585 aa15.68■□□□□ 0.1
RNF43-202ENST00000577625 CNTNAP1P78357 1384 aa15.67■□□□□ 0.1
RNF43-202ENST00000577625 FRMPD2Q68DX3 1309 aaPredicted RBP15.67■□□□□ 0.1
RNF43-202ENST00000577625 TCP10L2B9ZVM9 353 aa15.67■□□□□ 0.1
RNF43-202ENST00000577625 STXBP3O00186 592 aa15.67■□□□□ 0.1
RNF43-202ENST00000577625 PTPREP23469 700 aa15.67■□□□□ 0.1
RNF43-202ENST00000577625 ANO6Q4KMQ2 910 aa15.67■□□□□ 0.1
RNF43-202ENST00000577625 CIAPIN1Q6FI81 312 aa15.67■□□□□ 0.1
RNF43-202ENST00000577625 CCDC186Q7Z3E2 898 aa15.67■□□□□ 0.1
RNF43-202ENST00000577625 TXLNBQ8N3L3 684 aa15.67■□□□□ 0.1
RNF43-202ENST00000577625 JDP2Q8WYK2 163 aa15.67■□□□□ 0.1
RNF43-202ENST00000577625 CLIC6Q96NY7 704 aa15.67■□□□□ 0.1
RNF43-202ENST00000577625 CSRNP1Q96S65 589 aa15.67■□□□□ 0.1
RNF43-202ENST00000577625 SDF4Q9BRK5 362 aa15.67■□□□□ 0.1
RNF43-202ENST00000577625 BARHL2Q9NY43 387 aa15.67■□□□□ 0.1
RNF43-202ENST00000577625 LTBP3Q9NS15 1303 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms