RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 PCDHB12Q9Y5F1 795 aa8.35□□□□□ -1.07
SMCHD1-202ENST00000577300 OR14I1A6ND48 311 aa8.34□□□□□ -1.07
SMCHD1-202ENST00000577300 HRKO00198 91 aa8.34□□□□□ -1.07
SMCHD1-202ENST00000577300 GALK1P51570 392 aa8.34□□□□□ -1.07
SMCHD1-202ENST00000577300 CEP128Q6ZU80 1094 aa8.34□□□□□ -1.07
SMCHD1-202ENST00000577300 FCRL2Q96LA5 508 aaPredicted RBP8.34□□□□□ -1.07
SMCHD1-202ENST00000577300 METTL5Q9NRN9 209 aaKnown RBP8.34□□□□□ -1.07
SMCHD1-202ENST00000577300 TNFRSF10DQ9UBN6 386 aa8.34□□□□□ -1.07
SMCHD1-202ENST00000577300 FKTNO75072 461 aa8.33□□□□□ -1.08
SMCHD1-202ENST00000577300 IMPDH2P12268 514 aa8.33□□□□□ -1.08
SMCHD1-202ENST00000577300 AUHQ13825 339 aaKnown RBP8.33□□□□□ -1.08
SMCHD1-202ENST00000577300 TMCO4Q5TGY1 634 aa8.33□□□□□ -1.08
SMCHD1-202ENST00000577300 ZPBP2Q6X784 338 aa8.33□□□□□ -1.08
SMCHD1-202ENST00000577300 TAB3Q8N5C8 712 aaPredicted RBP8.33□□□□□ -1.08
SMCHD1-202ENST00000577300 DHRS1Q96LJ7 313 aa8.33□□□□□ -1.08
SMCHD1-202ENST00000577300 BACH2Q9BYV9 841 aa8.33□□□□□ -1.08
SMCHD1-202ENST00000577300 GCM1Q9NP62 436 aa8.33□□□□□ -1.08
SMCHD1-202ENST00000577300 SUCOQ9UBS9 1254 aaKnown RBP8.33□□□□□ -1.08
SMCHD1-202ENST00000577300 MINPP1Q9UNW1 487 aa8.33□□□□□ -1.08
SMCHD1-202ENST00000577300 FADS2P1A8MWK0 482 aa8.32□□□□□ -1.08
SMCHD1-202ENST00000577300 NUAK1O60285 661 aa8.32□□□□□ -1.08
SMCHD1-202ENST00000577300 PNLIPP16233 465 aa8.32□□□□□ -1.08
SMCHD1-202ENST00000577300 BMP8BP34820 402 aa8.32□□□□□ -1.08
SMCHD1-202ENST00000577300 FANCCQ00597 558 aa8.32□□□□□ -1.08
SMCHD1-202ENST00000577300 ADGRF1Q5T601 910 aa8.32□□□□□ -1.08
SMCHD1-202ENST00000577300 TMEM132EQ6IEE7 984 aa8.32□□□□□ -1.08
SMCHD1-202ENST00000577300 USP48Q86UV5 1035 aa8.32□□□□□ -1.08
SMCHD1-202ENST00000577300 SIRT2Q8IXJ6 389 aa8.32□□□□□ -1.08
SMCHD1-202ENST00000577300 GFOD1Q9NXC2 390 aa8.32□□□□□ -1.08
SMCHD1-202ENST00000577300 FBXL21Q9UKT6 434 aa8.32□□□□□ -1.08
SMCHD1-202ENST00000577300 ZNF205O95201 554 aa8.31□□□□□ -1.08
SMCHD1-202ENST00000577300 ACRP10323 421 aa8.31□□□□□ -1.08
SMCHD1-202ENST00000577300 CTSKP43235 329 aa8.31□□□□□ -1.08
SMCHD1-202ENST00000577300 RTP1P59025 263 aa8.31□□□□□ -1.08
SMCHD1-202ENST00000577300 RAPGEFL1Q9UHV5 662 aa8.31□□□□□ -1.08
SMCHD1-202ENST00000577300 GALNT18Q6P9A2 607 aa8.3□□□□□ -1.08
SMCHD1-202ENST00000577300 WTIPA6NIX2 430 aaPredicted RBP8.29□□□□□ -1.08
SMCHD1-202ENST00000577300 MEIS1O00470 390 aa8.29□□□□□ -1.08
SMCHD1-202ENST00000577300 PMS1P54277 932 aaKnown RBP8.29□□□□□ -1.08
SMCHD1-202ENST00000577300 C7orf61Q8IZ16 206 aa8.29□□□□□ -1.08
SMCHD1-202ENST00000577300 SMARCC1Q92922 1105 aaPredicted RBP8.29□□□□□ -1.08
SMCHD1-202ENST00000577300 TM9SF2Q99805 663 aa8.29□□□□□ -1.08
SMCHD1-202ENST00000577300 PLCD4Q9BRC7 762 aa8.29□□□□□ -1.08
SMCHD1-202ENST00000577300 ERVK13-1Q9NX77 482 aa8.29□□□□□ -1.08
SMCHD1-202ENST00000577300 ZBTB7CA1YPR0 619 aa8.28□□□□□ -1.08
SMCHD1-202ENST00000577300 C9IYK1 514 aa8.28□□□□□ -1.08
SMCHD1-202ENST00000577300 SHOXO15266 292 aa8.28□□□□□ -1.08
SMCHD1-202ENST00000577300 GSNP06396 782 aa8.28□□□□□ -1.08
SMCHD1-202ENST00000577300 VAV1P15498 845 aa8.28□□□□□ -1.08
SMCHD1-202ENST00000577300 ERVFRD-1P60508 538 aa8.28□□□□□ -1.08
SMCHD1-202ENST00000577300 YBX1P67809 324 aaKnown RBP8.28□□□□□ -1.08
SMCHD1-202ENST00000577300 HSF5Q4G112 596 aaPredicted RBP8.28□□□□□ -1.08
SMCHD1-202ENST00000577300 ZNF394Q53GI3 561 aa8.28□□□□□ -1.08
SMCHD1-202ENST00000577300 TTLL10Q6ZVT0 673 aa8.28□□□□□ -1.08
SMCHD1-202ENST00000577300 SLCO6A1Q86UG4 719 aa8.28□□□□□ -1.08
SMCHD1-202ENST00000577300 RBBP8NLQ8NC74 664 aaPredicted RBP8.28□□□□□ -1.08
SMCHD1-202ENST00000577300 FERD3LQ96RJ6 166 aa8.28□□□□□ -1.08
SMCHD1-202ENST00000577300 SGPP1Q9BX95 441 aa8.28□□□□□ -1.08
SMCHD1-202ENST00000577300 IRF2BPLQ9H1B7 796 aa8.28□□□□□ -1.08
SMCHD1-202ENST00000577300 MBD1Q9UIS9 605 aaPredicted RBP8.28□□□□□ -1.08
SMCHD1-202ENST00000577300 CNOT6Q9ULM6 557 aaKnown RBP8.28□□□□□ -1.08
SMCHD1-202ENST00000577300 GPR55Q9Y2T6 319 aaPredicted RBP8.28□□□□□ -1.08
SMCHD1-202ENST00000577300 A0A1W2PQ45 241 aaPredicted RBP8.27□□□□□ -1.09
SMCHD1-202ENST00000577300 A0A1W2PQY0 241 aa8.27□□□□□ -1.09
SMCHD1-202ENST00000577300 CEBPAP49715 358 aaPredicted RBP8.27□□□□□ -1.09
SMCHD1-202ENST00000577300 SRSF3P84103 164 aaKnown RBP8.27□□□□□ -1.09
SMCHD1-202ENST00000577300 ANKRD39Q53RE8 183 aa8.27□□□□□ -1.09
SMCHD1-202ENST00000577300 CRTC3Q6UUV7 619 aa8.27□□□□□ -1.09
SMCHD1-202ENST00000577300 CCDC144CPQ8IYA2 1237 aa8.27□□□□□ -1.09
SMCHD1-202ENST00000577300 RNF34Q969K3 372 aa8.27□□□□□ -1.09
SMCHD1-202ENST00000577300 CDADC1Q9BWV3 514 aa8.27□□□□□ -1.09
SMCHD1-202ENST00000577300 PCDHGB7Q9Y5F8 929 aa8.27□□□□□ -1.09
SMCHD1-202ENST00000577300 TAF6LQ9Y6J9 622 aa8.27□□□□□ -1.09
SMCHD1-202ENST00000577300 KRTAP9-7A8MTY7 169 aa8.26□□□□□ -1.09
SMCHD1-202ENST00000577300 ABLIM1O14639 778 aa8.26□□□□□ -1.09
SMCHD1-202ENST00000577300 LAPTM5Q13571 262 aa8.26□□□□□ -1.09
SMCHD1-202ENST00000577300 ZNF385BQ569K4 471 aa8.26□□□□□ -1.09
SMCHD1-202ENST00000577300 OLFML2BQ68BL8 750 aa8.26□□□□□ -1.09
SMCHD1-202ENST00000577300 DSCC1Q9BVC3 393 aa8.26□□□□□ -1.09
SMCHD1-202ENST00000577300 KRTAP4-9Q9BYQ8 210 aa8.26□□□□□ -1.09
SMCHD1-202ENST00000577300 AP5S1Q9NUS5 200 aa8.26□□□□□ -1.09
SMCHD1-202ENST00000577300 KCTD3Q9Y597 815 aa8.26□□□□□ -1.09
SMCHD1-202ENST00000577300 FAM86C2PA6NEL3 165 aa8.25□□□□□ -1.09
SMCHD1-202ENST00000577300 VIPR1P32241 457 aa8.25□□□□□ -1.09
SMCHD1-202ENST00000577300 ARL4AP40617 200 aa8.25□□□□□ -1.09
SMCHD1-202ENST00000577300 RTP2Q5QGT7 225 aa8.25□□□□□ -1.09
SMCHD1-202ENST00000577300 PPFIBP1Q86W92 1011 aa8.25□□□□□ -1.09
SMCHD1-202ENST00000577300 SIRT5Q9NXA8 310 aa8.25□□□□□ -1.09
SMCHD1-202ENST00000577300 DDX41Q9UJV9 622 aaKnown RBP8.25□□□□□ -1.09
SMCHD1-202ENST00000577300 ACSL6Q9UKU0 697 aa8.25□□□□□ -1.09
SMCHD1-202ENST00000577300 RFXAPO00287 272 aa8.24□□□□□ -1.09
SMCHD1-202ENST00000577300 MPOP05164 745 aa8.24□□□□□ -1.09
SMCHD1-202ENST00000577300 VAMP1P23763 118 aa8.24□□□□□ -1.09
SMCHD1-202ENST00000577300 GUCY2CP25092 1073 aa8.24□□□□□ -1.09
SMCHD1-202ENST00000577300 MFAP1P55081 439 aaKnown RBP8.24□□□□□ -1.09
SMCHD1-202ENST00000577300 RACK1P63244 317 aaKnown RBP8.24□□□□□ -1.09
SMCHD1-202ENST00000577300 KIR3DS1Q14943 382 aa8.24□□□□□ -1.09
SMCHD1-202ENST00000577300 LILRA6Q6PI73 481 aa8.24□□□□□ -1.09
SMCHD1-202ENST00000577300 TMEM52Q8NDY8 209 aa8.24□□□□□ -1.09
SMCHD1-202ENST00000577300 SIGLEC10Q96LC7 697 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms