RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 BAZ2BQ9UIF8 2168 aaKnown RBP10.26□□□□□ -0.77
SMG6-216ENST00000575176 SLC15A5A6NIM6 579 aa10.25□□□□□ -0.77
SMG6-216ENST00000575176 ZNF213O14771 459 aa10.25□□□□□ -0.77
SMG6-216ENST00000575176 HMGCRP04035 888 aa10.25□□□□□ -0.77
SMG6-216ENST00000575176 BMP3P12645 472 aa10.25□□□□□ -0.77
SMG6-216ENST00000575176 HOXD10P28358 340 aa10.25□□□□□ -0.77
SMG6-216ENST00000575176 ADORA2AP29274 412 aa10.25□□□□□ -0.77
SMG6-216ENST00000575176 MAP2K5Q13163 448 aa10.25□□□□□ -0.77
SMG6-216ENST00000575176 ARHGEF6Q15052 776 aa10.25□□□□□ -0.77
SMG6-216ENST00000575176 NECTIN1Q15223 517 aa10.25□□□□□ -0.77
SMG6-216ENST00000575176 RRP12Q5JTH9 1297 aaKnown RBP10.25□□□□□ -0.77
SMG6-216ENST00000575176 TTBK2Q6IQ55 1244 aa10.25□□□□□ -0.77
SMG6-216ENST00000575176 MFSD6Q6ZSS7 791 aa10.25□□□□□ -0.77
SMG6-216ENST00000575176 KCTD1Q719H9 257 aa10.25□□□□□ -0.77
SMG6-216ENST00000575176 ZKSCAN3Q9BRR0 538 aa10.25□□□□□ -0.77
SMG6-216ENST00000575176 HOXC10Q9NYD6 342 aa10.25□□□□□ -0.77
SMG6-216ENST00000575176 ZSWIM5Q9P217 1185 aa10.25□□□□□ -0.77
SMG6-216ENST00000575176 RBM8AQ9Y5S9 174 aaKnown RBP10.25□□□□□ -0.77
SMG6-216ENST00000575176 TNKSO95271 1327 aa10.25□□□□□ -0.77
SMG6-216ENST00000575176 E7EWF7 191 aa10.24□□□□□ -0.77
SMG6-216ENST00000575176 TOP1P11387 765 aaKnown RBP10.24□□□□□ -0.77
SMG6-216ENST00000575176 CYBAP13498 195 aa10.24□□□□□ -0.77
SMG6-216ENST00000575176 CYP2B6P20813 491 aa10.24□□□□□ -0.77
SMG6-216ENST00000575176 MCCP23508 829 aa10.24□□□□□ -0.77
SMG6-216ENST00000575176 GJA8P48165 433 aa10.24□□□□□ -0.77
SMG6-216ENST00000575176 NT5C2P49902 561 aa10.24□□□□□ -0.77
SMG6-216ENST00000575176 CACNB2Q08289 660 aaPredicted RBP10.24□□□□□ -0.77
SMG6-216ENST00000575176 ZNF543Q08ER8 600 aa10.24□□□□□ -0.77
SMG6-216ENST00000575176 IMMTQ16891 758 aaKnown RBP10.24□□□□□ -0.77
SMG6-216ENST00000575176 ABRAQ8N0Z2 381 aa10.24□□□□□ -0.77
SMG6-216ENST00000575176 PRPF38AQ8NAV1 312 aaKnown RBP10.24□□□□□ -0.77
SMG6-216ENST00000575176 DCAF4Q8WV16 495 aa10.24□□□□□ -0.77
SMG6-216ENST00000575176 CCDC136Q96JN2 1154 aa10.24□□□□□ -0.77
SMG6-216ENST00000575176 NUDT12Q9BQG2 462 aa10.24□□□□□ -0.77
SMG6-216ENST00000575176 TEX13BQ9BXU2 312 aa10.24□□□□□ -0.77
SMG6-216ENST00000575176 RANBP17Q9H2T7 1088 aaKnown RBP10.24□□□□□ -0.77
SMG6-216ENST00000575176 RNF41Q9H4P4 317 aaPredicted RBP10.24□□□□□ -0.77
SMG6-216ENST00000575176 FEM1BQ9UK73 627 aa10.24□□□□□ -0.77
SMG6-216ENST00000575176 PRR12Q9ULL5 1215 aa10.24□□□□□ -0.77
SMG6-216ENST00000575176 TMEM232C9JQI7 657 aa10.23□□□□□ -0.77
SMG6-216ENST00000575176 MYCP01106 439 aaPredicted RBP10.23□□□□□ -0.77
SMG6-216ENST00000575176 GJB1P08034 283 aa10.23□□□□□ -0.77
SMG6-216ENST00000575176 PRKAR2AP13861 404 aaKnown RBP10.23□□□□□ -0.77
SMG6-216ENST00000575176 CCND3P30281 292 aaPredicted RBP10.23□□□□□ -0.77
SMG6-216ENST00000575176 RGS2P41220 211 aa10.23□□□□□ -0.77
SMG6-216ENST00000575176 STAT2P52630 851 aa10.23□□□□□ -0.77
SMG6-216ENST00000575176 OAZ1P54368 228 aa10.23□□□□□ -0.77
SMG6-216ENST00000575176 CCNA1P78396 465 aa10.23□□□□□ -0.77
SMG6-216ENST00000575176 ZNF792Q3KQV3 632 aa10.23□□□□□ -0.77
SMG6-216ENST00000575176 LHX8Q68G74 356 aa10.23□□□□□ -0.77
SMG6-216ENST00000575176 SNRNP48Q6IEG0 339 aaKnown RBP10.23□□□□□ -0.77
SMG6-216ENST00000575176 DGKHQ86XP1 1220 aa10.23□□□□□ -0.77
SMG6-216ENST00000575176 ESR2Q92731 530 aa10.23□□□□□ -0.77
SMG6-216ENST00000575176 TTC14Q96N46 770 aa10.23□□□□□ -0.77
SMG6-216ENST00000575176 ZSCAN10Q96SZ4 725 aaPredicted RBP10.23□□□□□ -0.77
SMG6-216ENST00000575176 KATNBL1Q9H079 304 aa10.23□□□□□ -0.77
SMG6-216ENST00000575176 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.23□□□□□ -0.77
SMG6-216ENST00000575176 CPVLQ9H3G5 476 aa10.23□□□□□ -0.77
SMG6-216ENST00000575176 MROH8Q9H579 483 aa10.23□□□□□ -0.77
SMG6-216ENST00000575176 GPHNQ9NQX3 736 aaPredicted RBP10.23□□□□□ -0.77
SMG6-216ENST00000575176 U3KPZ7 1027 aaPredicted RBP10.23□□□□□ -0.77
SMG6-216ENST00000575176 SLC27A2O14975 620 aa10.22□□□□□ -0.77
SMG6-216ENST00000575176 SLC25A27O95847 323 aa10.22□□□□□ -0.77
SMG6-216ENST00000575176 SLC16A2P36021 539 aa10.22□□□□□ -0.77
SMG6-216ENST00000575176 STAT3P40763 770 aa10.22□□□□□ -0.77
SMG6-216ENST00000575176 SLC1A4P43007 532 aa10.22□□□□□ -0.77
SMG6-216ENST00000575176 SNAP25P60880 206 aa10.22□□□□□ -0.77
SMG6-216ENST00000575176 ERICH6BQ5W0A0 696 aa10.22□□□□□ -0.77
SMG6-216ENST00000575176 OLFML2BQ68BL8 750 aa10.22□□□□□ -0.77
SMG6-216ENST00000575176 RASEFQ8IZ41 740 aa10.22□□□□□ -0.77
SMG6-216ENST00000575176 PNMA1Q8ND90 353 aa10.22□□□□□ -0.77
SMG6-216ENST00000575176 U2AF1L4Q8WU68 220 aaKnown RBP10.22□□□□□ -0.77
SMG6-216ENST00000575176 RUFY2Q8WXA3 655 aa10.22□□□□□ -0.77
SMG6-216ENST00000575176 KCNB2Q92953 911 aa10.22□□□□□ -0.77
SMG6-216ENST00000575176 KIFC2Q96AC6 838 aa10.22□□□□□ -0.77
SMG6-216ENST00000575176 CHMP4CQ96CF2 233 aa10.22□□□□□ -0.77
SMG6-216ENST00000575176 MAML3Q96JK9 1138 aa10.22□□□□□ -0.77
SMG6-216ENST00000575176 AGBL1Q96MI9 1066 aa10.22□□□□□ -0.77
SMG6-216ENST00000575176 RAVER2Q9HCJ3 691 aaKnown RBP10.22□□□□□ -0.77
SMG6-216ENST00000575176 CTNNA3Q9UI47 895 aa10.22□□□□□ -0.77
SMG6-216ENST00000575176 FRMPD2Q68DX3 1309 aaPredicted RBP10.22□□□□□ -0.77
SMG6-216ENST00000575176 OPLAHO14841 1288 aa10.21□□□□□ -0.77
SMG6-216ENST00000575176 ADCY6O43306 1168 aa10.21□□□□□ -0.77
SMG6-216ENST00000575176 STRNO43815 780 aa10.21□□□□□ -0.77
SMG6-216ENST00000575176 RAD21O60216 631 aa10.21□□□□□ -0.77
SMG6-216ENST00000575176 CDC45O75419 566 aa10.21□□□□□ -0.77
SMG6-216ENST00000575176 PGK2P07205 417 aa10.21□□□□□ -0.77
SMG6-216ENST00000575176 ZKSCAN1P17029 563 aaPredicted RBP10.21□□□□□ -0.77
SMG6-216ENST00000575176 CYP2C19P33261 490 aa10.21□□□□□ -0.77
SMG6-216ENST00000575176 TROAPQ12815 778 aa10.21□□□□□ -0.77
SMG6-216ENST00000575176 MUM1L1Q5H9M0 696 aa10.21□□□□□ -0.77
SMG6-216ENST00000575176 PPP4R3BQ5MIZ7 849 aa10.21□□□□□ -0.77
SMG6-216ENST00000575176 CREB3L3Q68CJ9 461 aa10.21□□□□□ -0.77
SMG6-216ENST00000575176 NBPF11Q86T75 865 aa10.21□□□□□ -0.77
SMG6-216ENST00000575176 FAM160B2Q86V87 743 aa10.21□□□□□ -0.77
SMG6-216ENST00000575176 NCAPG2Q86XI2 1143 aa10.21□□□□□ -0.77
SMG6-216ENST00000575176 IGDCC4Q8TDY8 1250 aa10.21□□□□□ -0.77
SMG6-216ENST00000575176 DIS3LQ8TF46 1054 aaKnown RBP10.21□□□□□ -0.77
SMG6-216ENST00000575176 MTMR8Q96EF0 704 aa10.21□□□□□ -0.77
SMG6-216ENST00000575176 CNNM2Q9H8M5 875 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms