RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 MFSD14BQ5SR56 506 aa9.59□□□□□ -0.87
RPAIN-215ENST00000575112 SRGAP1Q7Z6B7 1085 aa9.59□□□□□ -0.87
RPAIN-215ENST00000575112 LINC00116Q8NCU8 138 aa9.59□□□□□ -0.87
RPAIN-215ENST00000575112 CHP1Q99653 195 aa9.59□□□□□ -0.87
RPAIN-215ENST00000575112 DACH1Q9UI36 760 aa9.59□□□□□ -0.87
RPAIN-215ENST00000575112 MST1RQ04912 1400 aa9.59□□□□□ -0.87
RPAIN-215ENST00000575112 SLIT1O75093 1534 aa9.58□□□□□ -0.88
RPAIN-215ENST00000575112 MACROD2A1Z1Q3 448 aa9.58□□□□□ -0.88
RPAIN-215ENST00000575112 IFNAR1P17181 557 aa9.58□□□□□ -0.88
RPAIN-215ENST00000575112 GNAT2P19087 354 aa9.58□□□□□ -0.88
RPAIN-215ENST00000575112 TRIM21P19474 475 aaKnown RBP9.58□□□□□ -0.88
RPAIN-215ENST00000575112 ARID4AP29374 1257 aaPredicted RBP9.58□□□□□ -0.88
RPAIN-215ENST00000575112 NR1I3Q14994 352 aa9.58□□□□□ -0.88
RPAIN-215ENST00000575112 FAM204AQ9H8W3 233 aa9.58□□□□□ -0.88
RPAIN-215ENST00000575112 ZNF804BA4D1E1 1349 aa9.58□□□□□ -0.88
RPAIN-215ENST00000575112 CAMTA2O94983 1202 aa9.58□□□□□ -0.88
RPAIN-215ENST00000575112 GYPCP04921 128 aa9.58□□□□□ -0.88
RPAIN-215ENST00000575112 LRRC41Q15345 812 aa9.58□□□□□ -0.88
RPAIN-215ENST00000575112 TBC1D10BQ4KMP7 808 aaPredicted RBP9.58□□□□□ -0.88
RPAIN-215ENST00000575112 DTHD1Q6ZMT9 781 aa9.58□□□□□ -0.88
RPAIN-215ENST00000575112 FNBP4Q8N3X1 1017 aaPredicted RBP9.58□□□□□ -0.88
RPAIN-215ENST00000575112 SRRTQ9BXP5 876 aaKnown RBP9.58□□□□□ -0.88
RPAIN-215ENST00000575112 BMP2KQ9NSY1 1161 aaPredicted RBP9.58□□□□□ -0.88
RPAIN-215ENST00000575112 EIF3CLB5ME19 914 aaKnown RBP9.58□□□□□ -0.88
RPAIN-215ENST00000575112 NKRFO15226 690 aaKnown RBP eCLIP9.58□□□□□ -0.88
RPAIN-215ENST00000575112 BAG3O95817 575 aa9.58□□□□□ -0.88
RPAIN-215ENST00000575112 CUL4BQ13620 913 aa9.58□□□□□ -0.88
RPAIN-215ENST00000575112 PLS1Q14651 629 aa9.58□□□□□ -0.88
RPAIN-215ENST00000575112 GRIK5Q16478 980 aa9.58□□□□□ -0.88
RPAIN-215ENST00000575112 CTR9Q6PD62 1173 aa9.58□□□□□ -0.88
RPAIN-215ENST00000575112 ZNF34Q8IZ26 560 aa9.58□□□□□ -0.88
RPAIN-215ENST00000575112 SRBD1Q8N5C6 995 aaKnown RBP9.58□□□□□ -0.88
RPAIN-215ENST00000575112 GOLGA5Q8TBA6 731 aa9.58□□□□□ -0.88
RPAIN-215ENST00000575112 EIF3CQ99613 913 aaKnown RBP9.58□□□□□ -0.88
RPAIN-215ENST00000575112 USP21Q9UK80 565 aa9.58□□□□□ -0.88
RPAIN-215ENST00000575112 UTRNP46939 3433 aa9.57□□□□□ -0.88
RPAIN-215ENST00000575112 CCDC151A5D8V7 595 aa9.57□□□□□ -0.88
RPAIN-215ENST00000575112 KIF5BP33176 963 aa9.57□□□□□ -0.88
RPAIN-215ENST00000575112 KIAA0825Q8IV33 1275 aa9.57□□□□□ -0.88
RPAIN-215ENST00000575112 NELFCDQ8IXH7 590 aa9.57□□□□□ -0.88
RPAIN-215ENST00000575112 EXOC4Q96A65 974 aa9.57□□□□□ -0.88
RPAIN-215ENST00000575112 CRACR2AQ9BSW2 395 aa9.57□□□□□ -0.88
RPAIN-215ENST00000575112 C4AP0C0L4 1744 aa9.57□□□□□ -0.88
RPAIN-215ENST00000575112 C4BP0C0L5 1744 aa9.57□□□□□ -0.88
RPAIN-215ENST00000575112 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.57□□□□□ -0.88
RPAIN-215ENST00000575112 ZNF185O15231 689 aa9.57□□□□□ -0.88
RPAIN-215ENST00000575112 KIF5CO60282 957 aa9.57□□□□□ -0.88
RPAIN-215ENST00000575112 ECM2O94769 699 aaPredicted RBP9.57□□□□□ -0.88
RPAIN-215ENST00000575112 TRIM37O94972 964 aa9.57□□□□□ -0.88
RPAIN-215ENST00000575112 KRT9P35527 623 aa9.57□□□□□ -0.88
RPAIN-215ENST00000575112 ARHGEF1Q92888 912 aaKnown RBP9.57□□□□□ -0.88
RPAIN-215ENST00000575112 SYNRGQ9UMZ2 1314 aa9.57□□□□□ -0.88
RPAIN-215ENST00000575112 KLRF2D3W0D1 207 aa9.57□□□□□ -0.88
RPAIN-215ENST00000575112 CCDC175P0C221 793 aa9.57□□□□□ -0.88
RPAIN-215ENST00000575112 GPS2Q13227 327 aa9.57□□□□□ -0.88
RPAIN-215ENST00000575112 TRIM28Q13263 835 aaKnown RBP9.57□□□□□ -0.88
RPAIN-215ENST00000575112 USH1GQ495M9 461 aa9.57□□□□□ -0.88
RPAIN-215ENST00000575112 TDRD12Q587J7 1177 aaKnown RBP9.57□□□□□ -0.88
RPAIN-215ENST00000575112 PAXIP1Q6ZW49 1069 aaPredicted RBP9.57□□□□□ -0.88
RPAIN-215ENST00000575112 IQUBQ8NA54 791 aa9.57□□□□□ -0.88
RPAIN-215ENST00000575112 CCDC47Q96A33 483 aaKnown RBP9.57□□□□□ -0.88
RPAIN-215ENST00000575112 CENPHQ9H3R5 247 aa9.57□□□□□ -0.88
RPAIN-215ENST00000575112 SLC39A2Q9NP94 309 aa9.57□□□□□ -0.88
RPAIN-215ENST00000575112 TCP11L1Q9NUJ3 509 aa9.57□□□□□ -0.88
RPAIN-215ENST00000575112 FBXO2Q9UK22 296 aaPredicted RBP9.57□□□□□ -0.88
RPAIN-215ENST00000575112 DUSP10Q9Y6W6 482 aa9.57□□□□□ -0.88
RPAIN-215ENST00000575112 ECM29Q5VYK3 1845 aa9.56□□□□□ -0.88
RPAIN-215ENST00000575112 AKR1B15C9JRZ8 316 aaPredicted RBP9.56□□□□□ -0.88
RPAIN-215ENST00000575112 PLCD1P51178 756 aa9.56□□□□□ -0.88
RPAIN-215ENST00000575112 DNAJC21Q5F1R6 531 aaKnown RBP9.56□□□□□ -0.88
RPAIN-215ENST00000575112 TCERG1LQ5VWI1 586 aa9.56□□□□□ -0.88
RPAIN-215ENST00000575112 MAEAQ7L5Y9 396 aa9.56□□□□□ -0.88
RPAIN-215ENST00000575112 SPICE1Q8N0Z3 855 aa9.56□□□□□ -0.88
RPAIN-215ENST00000575112 NELFBQ8WX92 580 aa9.56□□□□□ -0.88
RPAIN-215ENST00000575112 DCP1AQ9NPI6 582 aaPredicted RBP9.56□□□□□ -0.88
RPAIN-215ENST00000575112 JADE2Q9NQC1 790 aa9.56□□□□□ -0.88
RPAIN-215ENST00000575112 CDC23Q9UJX2 597 aa9.56□□□□□ -0.88
RPAIN-215ENST00000575112 LOC102724159A0A0B4J2E5 919 aa9.56□□□□□ -0.88
RPAIN-215ENST00000575112 EPS15P42566 896 aa9.56□□□□□ -0.88
RPAIN-215ENST00000575112 BTDP43251 543 aa9.56□□□□□ -0.88
RPAIN-215ENST00000575112 MORC3Q14149 939 aa9.56□□□□□ -0.88
RPAIN-215ENST00000575112 PWP2Q15269 919 aaKnown RBP9.56□□□□□ -0.88
RPAIN-215ENST00000575112 RBM26Q5T8P6 1007 aaKnown RBP9.56□□□□□ -0.88
RPAIN-215ENST00000575112 FCHSD1Q86WN1 690 aa9.56□□□□□ -0.88
RPAIN-215ENST00000575112 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.56□□□□□ -0.88
RPAIN-215ENST00000575112 FAM207AQ9NSI2 230 aaPredicted RBP9.56□□□□□ -0.88
RPAIN-215ENST00000575112 SMARCAL1Q9NZC9 954 aa9.56□□□□□ -0.88
RPAIN-215ENST00000575112 MYH13Q9UKX3 1938 aa9.56□□□□□ -0.88
RPAIN-215ENST00000575112 ACTN4O43707 911 aaKnown RBP9.56□□□□□ -0.88
RPAIN-215ENST00000575112 SYF2O95926 243 aaKnown RBP9.56□□□□□ -0.88
RPAIN-215ENST00000575112 SCG2P13521 617 aa9.56□□□□□ -0.88
RPAIN-215ENST00000575112 TAL1P17542 331 aaPredicted RBP9.56□□□□□ -0.88
RPAIN-215ENST00000575112 PDE4DQ08499 809 aa9.56□□□□□ -0.88
RPAIN-215ENST00000575112 SF3A3Q12874 501 aaKnown RBP eCLIP9.56□□□□□ -0.88
RPAIN-215ENST00000575112 SMARCC1Q92922 1105 aaPredicted RBP9.56□□□□□ -0.88
RPAIN-215ENST00000575112 ZC3H12CQ9C0D7 883 aaKnown RBP9.56□□□□□ -0.88
RPAIN-215ENST00000575112 SEPT11Q9NVA2 429 aaKnown RBP9.56□□□□□ -0.88
RPAIN-215ENST00000575112 TMEM260Q9NX78 707 aa9.56□□□□□ -0.88
RPAIN-215ENST00000575112 PLEKHG2Q9H7P9 1386 aa9.55□□□□□ -0.88
RPAIN-215ENST00000575112 SMCO2A6NFE2 343 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms