RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 UBA5Q9GZZ9 404 aa15.97■□□□□ 0.15
VPS33B-208ENST00000574755 TTLL1O95922 423 aa15.97■□□□□ 0.15
VPS33B-208ENST00000574755 SERPINC1P01008 464 aa15.97■□□□□ 0.15
VPS33B-208ENST00000574755 TERF1P54274 439 aa15.97■□□□□ 0.15
VPS33B-208ENST00000574755 PIGSQ96S52 555 aa15.97■□□□□ 0.15
VPS33B-208ENST00000574755 FANCLQ9NW38 375 aa15.97■□□□□ 0.15
VPS33B-208ENST00000574755 IMPACTQ9P2X3 320 aa15.97■□□□□ 0.15
VPS33B-208ENST00000574755 MYO3BQ8WXR4 1341 aa15.96■□□□□ 0.15
VPS33B-208ENST00000574755 SMCO2A6NFE2 343 aa15.96■□□□□ 0.15
VPS33B-208ENST00000574755 GNA11P29992 359 aa15.96■□□□□ 0.15
VPS33B-208ENST00000574755 SHMT1P34896 483 aa15.96■□□□□ 0.15
VPS33B-208ENST00000574755 LONP1P36776 959 aaKnown RBP15.96■□□□□ 0.15
VPS33B-208ENST00000574755 GSDMDP57764 484 aa15.96■□□□□ 0.15
VPS33B-208ENST00000574755 EN1Q05925 392 aaPredicted RBP15.96■□□□□ 0.15
VPS33B-208ENST00000574755 SOGA3Q5TF21 947 aa15.96■□□□□ 0.15
VPS33B-208ENST00000574755 C4orf32Q8N8J7 132 aa15.96■□□□□ 0.15
VPS33B-208ENST00000574755 IQUBQ8NA54 791 aa15.96■□□□□ 0.15
VPS33B-208ENST00000574755 C6orf50Q9HD87 102 aa15.96■□□□□ 0.15
VPS33B-208ENST00000574755 IGKV6D-41A0A0C4DH26 115 aa15.95■□□□□ 0.14
VPS33B-208ENST00000574755 MPHOSPH10O00566 681 aaKnown RBP15.95■□□□□ 0.14
VPS33B-208ENST00000574755 ASPRV1Q53RT3 343 aa15.95■□□□□ 0.14
VPS33B-208ENST00000574755 DACT2Q5SW24 774 aa15.95■□□□□ 0.14
VPS33B-208ENST00000574755 TMC6Q7Z403 805 aa15.95■□□□□ 0.14
VPS33B-208ENST00000574755 SH3RF1Q7Z6J0 888 aa15.95■□□□□ 0.14
VPS33B-208ENST00000574755 PYM1Q9BRP8 204 aaKnown RBP15.95■□□□□ 0.14
VPS33B-208ENST00000574755 STK32BQ9NY57 414 aa15.95■□□□□ 0.14
VPS33B-208ENST00000574755 PCDHAC2Q9Y5I4 1007 aa15.95■□□□□ 0.14
VPS33B-208ENST00000574755 CASP1P29466 404 aa15.95■□□□□ 0.14
VPS33B-208ENST00000574755 TXLNAP40222 546 aa15.95■□□□□ 0.14
VPS33B-208ENST00000574755 CACNB3P54284 484 aa15.95■□□□□ 0.14
VPS33B-208ENST00000574755 UBASH3AP57075 661 aa15.95■□□□□ 0.14
VPS33B-208ENST00000574755 FKBP1AP62942 108 aaKnown RBP15.95■□□□□ 0.14
VPS33B-208ENST00000574755 TCP10Q12799 353 aa15.95■□□□□ 0.14
VPS33B-208ENST00000574755 AOC3Q16853 763 aa15.95■□□□□ 0.14
VPS33B-208ENST00000574755 RIOX1Q9H6W3 641 aa15.95■□□□□ 0.14
VPS33B-208ENST00000574755 MYH4Q9Y623 1939 aa15.95■□□□□ 0.14
VPS33B-208ENST00000574755 MYO1BO43795 1136 aa15.94■□□□□ 0.14
VPS33B-208ENST00000574755 TPM2P07951 284 aa15.94■□□□□ 0.14
VPS33B-208ENST00000574755 CFAP100Q494V2 611 aa15.94■□□□□ 0.14
VPS33B-208ENST00000574755 DTHD1Q6ZMT9 781 aa15.94■□□□□ 0.14
VPS33B-208ENST00000574755 ZFPM1Q8IX07 1006 aa15.94■□□□□ 0.14
VPS33B-208ENST00000574755 ZNF646O15015 1829 aaPredicted RBP15.94■□□□□ 0.14
VPS33B-208ENST00000574755 CBFA2T2O43439 604 aa15.94■□□□□ 0.14
VPS33B-208ENST00000574755 SKILP12757 684 aa15.94■□□□□ 0.14
VPS33B-208ENST00000574755 ATP2B2Q01814 1243 aa15.94■□□□□ 0.14
VPS33B-208ENST00000574755 FMR1Q06787 632 aaKnown RBP eCLIP15.94■□□□□ 0.14
VPS33B-208ENST00000574755 DPYDQ12882 1025 aa15.94■□□□□ 0.14
VPS33B-208ENST00000574755 E2F4Q16254 413 aa15.94■□□□□ 0.14
VPS33B-208ENST00000574755 KRT25Q7Z3Z0 450 aa15.94■□□□□ 0.14
VPS33B-208ENST00000574755 STAMQ92783 540 aa15.94■□□□□ 0.14
VPS33B-208ENST00000574755 GSDMAQ96QA5 445 aa15.94■□□□□ 0.14
VPS33B-208ENST00000574755 MRIQ9BWK5 157 aa15.94■□□□□ 0.14
VPS33B-208ENST00000574755 EHD4Q9H223 541 aa15.94■□□□□ 0.14
VPS33B-208ENST00000574755 NFE2L3Q9Y4A8 694 aa15.94■□□□□ 0.14
VPS33B-208ENST00000574755 SNHG28P0DPA3 235 aa15.93■□□□□ 0.14
VPS33B-208ENST00000574755 CDC25AP30304 524 aa15.93■□□□□ 0.14
VPS33B-208ENST00000574755 NONOQ15233 471 aaKnown RBP eCLIP15.93■□□□□ 0.14
VPS33B-208ENST00000574755 HSP90AA4PQ58FG1 418 aa15.93■□□□□ 0.14
VPS33B-208ENST00000574755 TRMT44Q8IYL2 757 aaKnown RBP15.93■□□□□ 0.14
VPS33B-208ENST00000574755 ENOX1Q8TC92 643 aaKnown RBP15.93■□□□□ 0.14
VPS33B-208ENST00000574755 DHX36Q9H2U1 1008 aaKnown RBP15.93■□□□□ 0.14
VPS33B-208ENST00000574755 GPCPD1Q9NPB8 672 aa15.93■□□□□ 0.14
VPS33B-208ENST00000574755 SLURP2P0DP57 97 aa15.93■□□□□ 0.14
VPS33B-208ENST00000574755 HDLBPQ00341 1268 aaKnown RBP15.93■□□□□ 0.14
VPS33B-208ENST00000574755 ZSCAN29Q8IWY8 852 aaPredicted RBP15.93■□□□□ 0.14
VPS33B-208ENST00000574755 CAMKK2Q96RR4 588 aa15.93■□□□□ 0.14
VPS33B-208ENST00000574755 TMEM60Q9H2L4 133 aa15.93■□□□□ 0.14
VPS33B-208ENST00000574755 GREB1LQ9C091 1923 aaPredicted RBP15.93■□□□□ 0.14
VPS33B-208ENST00000574755 C10orf71Q711Q0 1435 aa15.92■□□□□ 0.14
VPS33B-208ENST00000574755 hCG_1984214I3L0E3 225 aa15.92■□□□□ 0.14
VPS33B-208ENST00000574755 LAD1O00515 517 aa15.92■□□□□ 0.14
VPS33B-208ENST00000574755 LETM2Q2VYF4 491 aa15.92■□□□□ 0.14
VPS33B-208ENST00000574755 PDXDC2PQ6P474 469 aa15.92■□□□□ 0.14
VPS33B-208ENST00000574755 REXO1Q8N1G1 1221 aaKnown RBP15.92■□□□□ 0.14
VPS33B-208ENST00000574755 ZNF713Q8N859 430 aaPredicted RBP15.92■□□□□ 0.14
VPS33B-208ENST00000574755 RASSF8Q8NHQ8 419 aa15.92■□□□□ 0.14
VPS33B-208ENST00000574755 C7orf43Q8WVR3 580 aa15.92■□□□□ 0.14
VPS33B-208ENST00000574755 DPF2Q92785 391 aa15.92■□□□□ 0.14
VPS33B-208ENST00000574755 CCNT1O60563 726 aaKnown RBP15.92■□□□□ 0.14
VPS33B-208ENST00000574755 ERCC5P28715 1186 aaPredicted RBP15.92■□□□□ 0.14
VPS33B-208ENST00000574755 CCZ1BP86790 482 aa15.92■□□□□ 0.14
VPS33B-208ENST00000574755 CCZ1P86791 482 aaPredicted RBP15.92■□□□□ 0.14
VPS33B-208ENST00000574755 ZNF543Q08ER8 600 aa15.92■□□□□ 0.14
VPS33B-208ENST00000574755 CCDC150Q8NCX0 1101 aa15.92■□□□□ 0.14
VPS33B-208ENST00000574755 CCDC17Q96LX7 622 aa15.92■□□□□ 0.14
VPS33B-208ENST00000574755 BLZF1Q9H2G9 400 aa15.92■□□□□ 0.14
VPS33B-208ENST00000574755 DNAJC18Q9H819 358 aa15.92■□□□□ 0.14
VPS33B-208ENST00000574755 SERPINA10Q9UK55 444 aa15.92■□□□□ 0.14
VPS33B-208ENST00000574755 SIPA1L1O43166 1804 aa15.92■□□□□ 0.14
VPS33B-208ENST00000574755 UQCRHLA0A096LP55 91 aa15.91■□□□□ 0.14
VPS33B-208ENST00000574755 ESYT2A0FGR8 921 aa15.91■□□□□ 0.14
VPS33B-208ENST00000574755 DDTLA6NHG4 134 aaPredicted RBP15.91■□□□□ 0.14
VPS33B-208ENST00000574755 FAM196BA6NMK8 535 aa15.91■□□□□ 0.14
VPS33B-208ENST00000574755 UQCRHP07919 91 aa15.91■□□□□ 0.14
VPS33B-208ENST00000574755 CDK11BP21127 795 aaKnown RBP15.91■□□□□ 0.14
VPS33B-208ENST00000574755 STAT6P42226 847 aa15.91■□□□□ 0.14
VPS33B-208ENST00000574755 KARSQ15046 597 aaKnown RBP15.91■□□□□ 0.14
VPS33B-208ENST00000574755 NEK8Q86SG6 692 aa15.91■□□□□ 0.14
VPS33B-208ENST00000574755 COA7Q96BR5 231 aa15.91■□□□□ 0.14
VPS33B-208ENST00000574755 IDI2Q9BXS1 227 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms