RNA–Protein interactions for RNA: ENST00000574437.5

ABR-228, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5 BASIC

Gene ABR, Length 3,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-228ENST00000574437 GTPBP6O43824 516 aaPredicted RBP16.73■□□□□ 0.27
ABR-228ENST00000574437 ATP2C1P98194 919 aaPredicted RBP16.73■□□□□ 0.27
ABR-228ENST00000574437 EVX2Q03828 476 aa16.73■□□□□ 0.27
ABR-228ENST00000574437 CHRNDQ07001 517 aa16.73■□□□□ 0.27
ABR-228ENST00000574437 KIAA1328Q86T90 577 aa16.73■□□□□ 0.27
ABR-228ENST00000574437 GOLGA6L1Q8N7Z2 621 aa16.73■□□□□ 0.27
ABR-228ENST00000574437 LUC7L2Q9Y383 392 aaKnown RBP16.73■□□□□ 0.27
ABR-228ENST00000574437 ITIH6Q6UXX5 1313 aa16.72■□□□□ 0.27
ABR-228ENST00000574437 LRRIQ3A6PVS8 624 aaPredicted RBP16.72■□□□□ 0.27
ABR-228ENST00000574437 FUT2Q10981 343 aa16.72■□□□□ 0.27
ABR-228ENST00000574437 USP17L12C9JPN9 530 aa16.72■□□□□ 0.27
ABR-228ENST00000574437 USP17L21D6R901 530 aa16.72■□□□□ 0.27
ABR-228ENST00000574437 ADAMTS3O15072 1205 aa16.72■□□□□ 0.27
ABR-228ENST00000574437 PARP1P09874 1014 aaKnown RBP16.72■□□□□ 0.27
ABR-228ENST00000574437 RCAN1P53805 252 aa16.72■□□□□ 0.27
ABR-228ENST00000574437 PPP2R5BQ15173 497 aa16.72■□□□□ 0.27
ABR-228ENST00000574437 SRBD1Q8N5C6 995 aaKnown RBP16.72■□□□□ 0.27
ABR-228ENST00000574437 CAGE1Q8TC20 777 aa16.72■□□□□ 0.27
ABR-228ENST00000574437 TSPYL1Q9H0U9 437 aa16.72■□□□□ 0.27
ABR-228ENST00000574437 ACBD3Q9H3P7 528 aa16.72■□□□□ 0.27
ABR-228ENST00000574437 CCDC87Q9NVE4 849 aa16.72■□□□□ 0.27
ABR-228ENST00000574437 RBM28Q9NW13 759 aaKnown RBP16.72■□□□□ 0.27
ABR-228ENST00000574437 LRP6O75581 1613 aa16.72■□□□□ 0.27
ABR-228ENST00000574437 MYH8P13535 1937 aa16.71■□□□□ 0.27
ABR-228ENST00000574437 EIF5P55010 431 aaKnown RBP16.71■□□□□ 0.27
ABR-228ENST00000574437 TROAPQ12815 778 aa16.71■□□□□ 0.27
ABR-228ENST00000574437 CCDC152Q4G0S7 254 aa16.71■□□□□ 0.27
ABR-228ENST00000574437 FOXR1Q6PIV2 292 aa16.71■□□□□ 0.27
ABR-228ENST00000574437 OR8K1Q8NGG5 319 aa16.71■□□□□ 0.27
ABR-228ENST00000574437 RASGRP4Q8TDF6 673 aa16.71■□□□□ 0.27
ABR-228ENST00000574437 TRIM47Q96LD4 638 aa16.71■□□□□ 0.27
ABR-228ENST00000574437 RASSF4Q9H2L5 321 aa16.71■□□□□ 0.27
ABR-228ENST00000574437 PLEKHA4Q9H4M7 779 aa16.71■□□□□ 0.27
ABR-228ENST00000574437 PSD3Q9NYI0 1048 aa16.71■□□□□ 0.27
ABR-228ENST00000574437 E2F4Q16254 413 aa16.71■□□□□ 0.27
ABR-228ENST00000574437 ZNF658Q5TYW1 1059 aaPredicted RBP16.71■□□□□ 0.27
ABR-228ENST00000574437 PDXDC2PQ6P474 469 aa16.71■□□□□ 0.27
ABR-228ENST00000574437 TMTC3Q6ZXV5 915 aa16.71■□□□□ 0.27
ABR-228ENST00000574437 ZNF34Q8IZ26 560 aa16.71■□□□□ 0.27
ABR-228ENST00000574437 MTA3Q9BTC8 594 aa16.71■□□□□ 0.27
ABR-228ENST00000574437 RRP15Q9Y3B9 282 aaKnown RBP16.71■□□□□ 0.27
ABR-228ENST00000574437 IL6STP40189 918 aaPredicted RBP16.71■□□□□ 0.26
ABR-228ENST00000574437 TRIM14Q14142 442 aa16.71■□□□□ 0.26
ABR-228ENST00000574437 IL17AQ16552 155 aa16.71■□□□□ 0.26
ABR-228ENST00000574437 RSPH14Q9UHP6 348 aa16.71■□□□□ 0.26
ABR-228ENST00000574437 PAPPAQ13219 1627 aa16.7■□□□□ 0.26
ABR-228ENST00000574437 ANKRD65E5RJM6 399 aa16.7■□□□□ 0.26
ABR-228ENST00000574437 ATP1A1P05023 1023 aaKnown RBP16.7■□□□□ 0.26
ABR-228ENST00000574437 TUBB4BP68371 445 aa16.7■□□□□ 0.26
ABR-228ENST00000574437 BICDL1Q6ZP65 573 aa16.7■□□□□ 0.26
ABR-228ENST00000574437 FAM204AQ9H8W3 233 aa16.7■□□□□ 0.26
ABR-228ENST00000574437 RMND1Q9NWS8 449 aa16.7■□□□□ 0.26
ABR-228ENST00000574437 MAGEC2Q9UBF1 373 aaPredicted RBP16.7■□□□□ 0.26
ABR-228ENST00000574437 REXO2Q9Y3B8 237 aaKnown RBP16.7■□□□□ 0.26
ABR-228ENST00000574437 PP2D1A8MPX8 630 aa16.7■□□□□ 0.26
ABR-228ENST00000574437 NPY5RQ15761 445 aa16.7■□□□□ 0.26
ABR-228ENST00000574437 GPKOWQ92917 476 aaPredicted RBP eCLIP16.7■□□□□ 0.26
ABR-228ENST00000574437 MMS19Q96T76 1030 aa16.7■□□□□ 0.26
ABR-228ENST00000574437 MYO1AQ9UBC5 1043 aa16.7■□□□□ 0.26
ABR-228ENST00000574437 SCG2P13521 617 aa16.69■□□□□ 0.26
ABR-228ENST00000574437 GPIHBP1Q8IV16 184 aa16.69■□□□□ 0.26
ABR-228ENST00000574437 GNL3LQ9NVN8 582 aaKnown RBP16.69■□□□□ 0.26
ABR-228ENST00000574437 DOT1LQ8TEK3 1739 aa16.69■□□□□ 0.26
ABR-228ENST00000574437 AFF2P51816 1311 aa16.69■□□□□ 0.26
ABR-228ENST00000574437 LRRC10BA6NIK2 292 aa16.69■□□□□ 0.26
ABR-228ENST00000574437 IPO7O95373 1038 aaKnown RBP16.69■□□□□ 0.26
ABR-228ENST00000574437 CALM1P0DP23 149 aa16.69■□□□□ 0.26
ABR-228ENST00000574437 CALM2P0DP24 149 aa16.69■□□□□ 0.26
ABR-228ENST00000574437 CALM3P0DP25 149 aa16.69■□□□□ 0.26
ABR-228ENST00000574437 GSPT2Q8IYD1 628 aaKnown RBP16.69■□□□□ 0.26
ABR-228ENST00000574437 SAR1BQ9Y6B6 198 aa16.69■□□□□ 0.26
ABR-228ENST00000574437 NRAPQ86VF7 1730 aa16.69■□□□□ 0.26
ABR-228ENST00000574437 ERVV-1B6SEH8 477 aa16.69■□□□□ 0.26
ABR-228ENST00000574437 TRIM21P19474 475 aaKnown RBP16.69■□□□□ 0.26
ABR-228ENST00000574437 PMS1P54277 932 aaKnown RBP16.69■□□□□ 0.26
ABR-228ENST00000574437 AMPD2Q01433 879 aa16.69■□□□□ 0.26
ABR-228ENST00000574437 MB21D1Q8N884 522 aa16.69■□□□□ 0.26
ABR-228ENST00000574437 LINC00116Q8NCU8 138 aa16.69■□□□□ 0.26
ABR-228ENST00000574437 FAM71BQ8TC56 605 aa16.69■□□□□ 0.26
ABR-228ENST00000574437 TNFRSF25Q93038 417 aa16.69■□□□□ 0.26
ABR-228ENST00000574437 NIP7Q9Y221 180 aaKnown RBP eCLIP16.69■□□□□ 0.26
ABR-228ENST00000574437 CHD4Q14839 1912 aa16.68■□□□□ 0.26
ABR-228ENST00000574437 CNTNAP5Q8WYK1 1306 aa16.68■□□□□ 0.26
ABR-228ENST00000574437 MACROD2A1Z1Q3 448 aa16.68■□□□□ 0.26
ABR-228ENST00000574437 SRLQ86TD4 932 aa16.68■□□□□ 0.26
ABR-228ENST00000574437 RIN2Q8WYP3 895 aaPredicted RBP16.68■□□□□ 0.26
ABR-228ENST00000574437 HAUS4Q9H6D7 363 aa16.68■□□□□ 0.26
ABR-228ENST00000574437 B4DLN1 442 aa16.68■□□□□ 0.26
ABR-228ENST00000574437 H7C1D1 291 aa16.68■□□□□ 0.26
ABR-228ENST00000574437 RNF40O75150 1001 aa16.68■□□□□ 0.26
ABR-228ENST00000574437 CCDC24Q8N4L8 307 aa16.68■□□□□ 0.26
ABR-228ENST00000574437 JADE2Q9NQC1 790 aa16.68■□□□□ 0.26
ABR-228ENST00000574437 TSPY2A6NKD2 308 aa16.67■□□□□ 0.26
ABR-228ENST00000574437 IVLP07476 585 aa16.67■□□□□ 0.26
ABR-228ENST00000574437 FECHP22830 423 aa16.67■□□□□ 0.26
ABR-228ENST00000574437 JAKMIP2Q96AA8 810 aa16.67■□□□□ 0.26
ABR-228ENST00000574437 GJD4Q96KN9 370 aaPredicted RBP16.67■□□□□ 0.26
ABR-228ENST00000574437 RIOK1Q9BRS2 568 aaKnown RBP16.67■□□□□ 0.26
ABR-228ENST00000574437 UBA7P41226 1012 aa16.67■□□□□ 0.26
ABR-228ENST00000574437 CYP27A1Q02318 531 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms