RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 BMP6P22004 513 aa11.91□□□□□ -0.5
USP43-205ENST00000574408 AFMP43652 599 aa11.91□□□□□ -0.5
USP43-205ENST00000574408 MYL5Q02045 173 aa11.91□□□□□ -0.5
USP43-205ENST00000574408 INF2Q27J81 1249 aa11.91□□□□□ -0.5
USP43-205ENST00000574408 GALNT17Q6IS24 598 aa11.91□□□□□ -0.5
USP43-205ENST00000574408 DAGLBQ8NCG7 672 aa11.91□□□□□ -0.5
USP43-205ENST00000574408 IFNKQ9P0W0 207 aa11.91□□□□□ -0.5
USP43-205ENST00000574408 KIAA1524Q8TCG1 905 aa11.91□□□□□ -0.5
USP43-205ENST00000574408 PDGFDQ9GZP0 370 aaPredicted RBP11.91□□□□□ -0.5
USP43-205ENST00000574408 SCN9AQ15858 1988 aa11.9□□□□□ -0.5
USP43-205ENST00000574408 M0R2N6 131 aa11.9□□□□□ -0.5
USP43-205ENST00000574408 CCDC12Q8WUD4 166 aaPredicted RBP11.9□□□□□ -0.5
USP43-205ENST00000574408 XPO4Q9C0E2 1151 aaKnown RBP11.9□□□□□ -0.5
USP43-205ENST00000574408 IGKV6D-41A0A0C4DH26 115 aa11.9□□□□□ -0.5
USP43-205ENST00000574408 TTLL1O95922 423 aa11.9□□□□□ -0.5
USP43-205ENST00000574408 SLFN14P0C7P3 912 aa11.9□□□□□ -0.5
USP43-205ENST00000574408 ATP1A3P13637 1013 aa11.9□□□□□ -0.5
USP43-205ENST00000574408 SOGA3Q5TF21 947 aa11.9□□□□□ -0.5
USP43-205ENST00000574408 ZSCAN29Q8IWY8 852 aaPredicted RBP11.9□□□□□ -0.5
USP43-205ENST00000574408 CACTINQ8WUQ7 758 aaKnown RBP11.9□□□□□ -0.5
USP43-205ENST00000574408 C7orf43Q8WVR3 580 aa11.9□□□□□ -0.5
USP43-205ENST00000574408 ZBTB9Q96C00 473 aa11.9□□□□□ -0.5
USP43-205ENST00000574408 GPCPD1Q9NPB8 672 aa11.9□□□□□ -0.5
USP43-205ENST00000574408 SMCO2A6NFE2 343 aa11.89□□□□□ -0.51
USP43-205ENST00000574408 FAM196BA6NMK8 535 aa11.89□□□□□ -0.51
USP43-205ENST00000574408 C21orf2O43822 256 aa11.89□□□□□ -0.51
USP43-205ENST00000574408 IL17AQ16552 155 aa11.89□□□□□ -0.51
USP43-205ENST00000574408 ZMYND12Q9H0C1 365 aa11.89□□□□□ -0.51
USP43-205ENST00000574408 PPIP5K2O43314 1243 aa11.89□□□□□ -0.51
USP43-205ENST00000574408 CASP1P29466 404 aa11.89□□□□□ -0.51
USP43-205ENST00000574408 SARSP49591 514 aaKnown RBP11.89□□□□□ -0.51
USP43-205ENST00000574408 ARID5BQ14865 1188 aa11.89□□□□□ -0.51
USP43-205ENST00000574408 ASPRV1Q53RT3 343 aa11.89□□□□□ -0.51
USP43-205ENST00000574408 NT5DC1Q5TFE4 455 aa11.89□□□□□ -0.51
USP43-205ENST00000574408 PAGE5Q96GU1 130 aa11.89□□□□□ -0.51
USP43-205ENST00000574408 C6orf50Q9HD87 102 aa11.89□□□□□ -0.51
USP43-205ENST00000574408 MYO3BQ8WXR4 1341 aa11.89□□□□□ -0.51
USP43-205ENST00000574408 GOLGB1Q14789 3259 aaKnown RBP11.89□□□□□ -0.51
USP43-205ENST00000574408 SMARCA1P28370 1054 aa11.89□□□□□ -0.51
USP43-205ENST00000574408 FKBP1AP62942 108 aaKnown RBP11.89□□□□□ -0.51
USP43-205ENST00000574408 FANCCQ00597 558 aa11.89□□□□□ -0.51
USP43-205ENST00000574408 MORC3Q14149 939 aa11.89□□□□□ -0.51
USP43-205ENST00000574408 ARL6IP4Q66PJ3 421 aaKnown RBP11.89□□□□□ -0.51
USP43-205ENST00000574408 HSD3B7Q9H2F3 369 aa11.89□□□□□ -0.51
USP43-205ENST00000574408 RGPD3A6NKT7 1758 aaPredicted RBP11.89□□□□□ -0.51
USP43-205ENST00000574408 RGPD4Q7Z3J3 1758 aa11.89□□□□□ -0.51
USP43-205ENST00000574408 MYH8P13535 1937 aa11.88□□□□□ -0.51
USP43-205ENST00000574408 DDTLA6NHG4 134 aaPredicted RBP11.88□□□□□ -0.51
USP43-205ENST00000574408 GNA11P29992 359 aa11.88□□□□□ -0.51
USP43-205ENST00000574408 CDC25AP30304 524 aa11.88□□□□□ -0.51
USP43-205ENST00000574408 C4orf32Q8N8J7 132 aa11.88□□□□□ -0.51
USP43-205ENST00000574408 STAMQ92783 540 aa11.88□□□□□ -0.51
USP43-205ENST00000574408 RIOX1Q9H6W3 641 aa11.88□□□□□ -0.51
USP43-205ENST00000574408 DNAJC18Q9H819 358 aa11.88□□□□□ -0.51
USP43-205ENST00000574408 HDLBPQ00341 1268 aaKnown RBP11.88□□□□□ -0.51
USP43-205ENST00000574408 CCDC96Q2M329 555 aa11.88□□□□□ -0.51
USP43-205ENST00000574408 KRT25Q7Z3Z0 450 aa11.88□□□□□ -0.51
USP43-205ENST00000574408 FAM177A1Q8N128 213 aaPredicted RBP11.88□□□□□ -0.51
USP43-205ENST00000574408 TRIML1Q8N9V2 468 aa11.88□□□□□ -0.51
USP43-205ENST00000574408 MLKLQ8NB16 471 aa11.88□□□□□ -0.51
USP43-205ENST00000574408 MRIQ9BWK5 157 aa11.88□□□□□ -0.51
USP43-205ENST00000574408 EHD4Q9H223 541 aa11.88□□□□□ -0.51
USP43-205ENST00000574408 TMEM60Q9H2L4 133 aa11.88□□□□□ -0.51
USP43-205ENST00000574408 SPTLC3Q9NUV7 552 aa11.88□□□□□ -0.51
USP43-205ENST00000574408 FAM198AQ9UFP1 575 aa11.88□□□□□ -0.51
USP43-205ENST00000574408 CC2D2BQ6DHV5 1058 aa11.88□□□□□ -0.51
USP43-205ENST00000574408 IQUBQ8NA54 791 aa11.88□□□□□ -0.51
USP43-205ENST00000574408 TRIM34Q9BYJ4 488 aa11.88□□□□□ -0.51
USP43-205ENST00000574408 FANCLQ9NW38 375 aa11.88□□□□□ -0.51
USP43-205ENST00000574408 DACH1Q9UI36 760 aa11.88□□□□□ -0.51
USP43-205ENST00000574408 RAD21O60216 631 aa11.87□□□□□ -0.51
USP43-205ENST00000574408 SNHG28P0DPA3 235 aa11.87□□□□□ -0.51
USP43-205ENST00000574408 LONP1P36776 959 aaKnown RBP11.87□□□□□ -0.51
USP43-205ENST00000574408 ZNF543Q08ER8 600 aa11.87□□□□□ -0.51
USP43-205ENST00000574408 NONOQ15233 471 aaKnown RBP eCLIP11.87□□□□□ -0.51
USP43-205ENST00000574408 HSP90AA4PQ58FG1 418 aa11.87□□□□□ -0.51
USP43-205ENST00000574408 DTHD1Q6ZMT9 781 aa11.87□□□□□ -0.51
USP43-205ENST00000574408 TMC6Q7Z403 805 aa11.87□□□□□ -0.51
USP43-205ENST00000574408 SH3RF1Q7Z6J0 888 aa11.87□□□□□ -0.51
USP43-205ENST00000574408 TRMT44Q8IYL2 757 aaKnown RBP11.87□□□□□ -0.51
USP43-205ENST00000574408 SUPT20HQ8NEM7 779 aa11.87□□□□□ -0.51
USP43-205ENST00000574408 COA7Q96BR5 231 aa11.87□□□□□ -0.51
USP43-205ENST00000574408 CCDC17Q96LX7 622 aa11.87□□□□□ -0.51
USP43-205ENST00000574408 DHX36Q9H2U1 1008 aaKnown RBP11.87□□□□□ -0.51
USP43-205ENST00000574408 SERPINA10Q9UK55 444 aa11.87□□□□□ -0.51
USP43-205ENST00000574408 SERPINC1P01008 464 aa11.87□□□□□ -0.51
USP43-205ENST00000574408 TXLNAP40222 546 aa11.87□□□□□ -0.51
USP43-205ENST00000574408 FMR1Q06787 632 aaKnown RBP eCLIP11.87□□□□□ -0.51
USP43-205ENST00000574408 LETM2Q2VYF4 491 aa11.87□□□□□ -0.51
USP43-205ENST00000574408 JAKMIP3Q5VZ66 844 aa11.87□□□□□ -0.51
USP43-205ENST00000574408 DEFB132Q7Z7B7 95 aa11.87□□□□□ -0.51
USP43-205ENST00000574408 LRRC8AQ8IWT6 810 aa11.87□□□□□ -0.51
USP43-205ENST00000574408 REXO1Q8N1G1 1221 aaKnown RBP11.87□□□□□ -0.51
USP43-205ENST00000574408 SPATA20Q8TB22 786 aa11.87□□□□□ -0.51
USP43-205ENST00000574408 IDI2Q9BXS1 227 aa11.87□□□□□ -0.51
USP43-205ENST00000574408 BIN2Q9UBW5 565 aaPredicted RBP11.87□□□□□ -0.51
USP43-205ENST00000574408 YDJCA8MPS7 323 aa11.86□□□□□ -0.51
USP43-205ENST00000574408 E2F4Q16254 413 aa11.86□□□□□ -0.51
USP43-205ENST00000574408 SHROOM1Q2M3G4 852 aaPredicted RBP11.86□□□□□ -0.51
USP43-205ENST00000574408 TTBK2Q6IQ55 1244 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms