RNA–Protein interactions for RNA: ENST00000574217.1

PRPF8-210, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 310 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-210ENST00000574217 GTF3C6Q969F1 213 aa7.8□□□□□ -1.16
PRPF8-210ENST00000574217 CHMP4CQ96CF2 233 aa7.8□□□□□ -1.16
PRPF8-210ENST00000574217 GMCL1Q96IK5 515 aa7.8□□□□□ -1.16
PRPF8-210ENST00000574217 ASCC2Q9H1I8 757 aaPredicted RBP7.8□□□□□ -1.16
PRPF8-210ENST00000574217 ZFYVE28Q9HCC9 887 aa7.8□□□□□ -1.16
PRPF8-210ENST00000574217 RBM28Q9NW13 759 aaKnown RBP7.8□□□□□ -1.16
PRPF8-210ENST00000574217 ISY1Q9ULR0 285 aaKnown RBP7.8□□□□□ -1.16
PRPF8-210ENST00000574217 HPS5Q9UPZ3 1129 aa7.8□□□□□ -1.16
PRPF8-210ENST00000574217 SLC45A1Q9Y2W3 748 aa7.8□□□□□ -1.16
PRPF8-210ENST00000574217 ZSWIM8A7E2V4 1837 aa7.8□□□□□ -1.16
PRPF8-210ENST00000574217 ADGRA2Q96PE1 1338 aa7.79□□□□□ -1.16
PRPF8-210ENST00000574217 MGAMO43451 1857 aa7.79□□□□□ -1.16
PRPF8-210ENST00000574217 USP17L15C9J2P7 530 aa7.79□□□□□ -1.16
PRPF8-210ENST00000574217 USP17L13C9JLJ4 530 aa7.79□□□□□ -1.16
PRPF8-210ENST00000574217 USP17L11C9JVI0 530 aa7.79□□□□□ -1.16
PRPF8-210ENST00000574217 USP17L18D6R9N7 530 aa7.79□□□□□ -1.16
PRPF8-210ENST00000574217 USP17L22D6RA61 530 aa7.79□□□□□ -1.16
PRPF8-210ENST00000574217 USP17L17D6RBQ6 530 aa7.79□□□□□ -1.16
PRPF8-210ENST00000574217 USP17L19D6RCP7 530 aa7.79□□□□□ -1.16
PRPF8-210ENST00000574217 USP17L20D6RJB6 530 aa7.79□□□□□ -1.16
PRPF8-210ENST00000574217 GPR25O00155 361 aa7.79□□□□□ -1.16
PRPF8-210ENST00000574217 WDR46O15213 610 aaKnown RBP7.79□□□□□ -1.16
PRPF8-210ENST00000574217 TLR2O60603 784 aa7.79□□□□□ -1.16
PRPF8-210ENST00000574217 HSP90AA1P07900 732 aaKnown RBP7.79□□□□□ -1.16
PRPF8-210ENST00000574217 CDC27P30260 824 aa7.79□□□□□ -1.16
PRPF8-210ENST00000574217 HOXA7P31268 230 aaPredicted RBP7.79□□□□□ -1.16
PRPF8-210ENST00000574217 GNAQP50148 359 aa7.79□□□□□ -1.16
PRPF8-210ENST00000574217 ZNF543Q08ER8 600 aa7.79□□□□□ -1.16
PRPF8-210ENST00000574217 USP17L24Q0WX57 530 aa7.79□□□□□ -1.16
PRPF8-210ENST00000574217 SCRN1Q12765 414 aa7.79□□□□□ -1.16
PRPF8-210ENST00000574217 PABPC4Q13310 644 aaKnown RBP eCLIP7.79□□□□□ -1.16
PRPF8-210ENST00000574217 GRM4Q14833 912 aa7.79□□□□□ -1.16
PRPF8-210ENST00000574217 CPLX2Q6PUV4 134 aaKnown RBP7.79□□□□□ -1.16
PRPF8-210ENST00000574217 CATSPERGQ6ZRH7 1159 aa7.79□□□□□ -1.16
PRPF8-210ENST00000574217 RASGRP2Q7LDG7 609 aa7.79□□□□□ -1.16
PRPF8-210ENST00000574217 CCDC83Q8IWF9 413 aa7.79□□□□□ -1.16
PRPF8-210ENST00000574217 NECAB1Q8N987 351 aa7.79□□□□□ -1.16
PRPF8-210ENST00000574217 PARK7Q99497 189 aaKnown RBP7.79□□□□□ -1.16
PRPF8-210ENST00000574217 P2RX7Q99572 595 aaKnown RBP7.79□□□□□ -1.16
PRPF8-210ENST00000574217 RPAP3Q9H6T3 665 aaPredicted RBP7.79□□□□□ -1.16
PRPF8-210ENST00000574217 NCOA5Q9HCD5 579 aaKnown RBP7.79□□□□□ -1.16
PRPF8-210ENST00000574217 DAXXQ9UER7 740 aaPredicted RBP7.79□□□□□ -1.16
PRPF8-210ENST00000574217 CPA4Q9UI42 421 aa7.79□□□□□ -1.16
PRPF8-210ENST00000574217 MAD2L2Q9UI95 211 aa7.79□□□□□ -1.16
PRPF8-210ENST00000574217 PNMA3Q9UL41 463 aa7.79□□□□□ -1.16
PRPF8-210ENST00000574217 COL11A1P12107 1806 aaPredicted RBP7.79□□□□□ -1.16
PRPF8-210ENST00000574217 FRMPD2Q68DX3 1309 aaPredicted RBP7.78□□□□□ -1.16
PRPF8-210ENST00000574217 PALM3A6NDB9 673 aaPredicted RBP7.78□□□□□ -1.16
PRPF8-210ENST00000574217 KLRF2D3W0D1 207 aa7.78□□□□□ -1.16
PRPF8-210ENST00000574217 PEX10O60683 326 aa7.78□□□□□ -1.16
PRPF8-210ENST00000574217 CDKL5O76039 1030 aa7.78□□□□□ -1.16
PRPF8-210ENST00000574217 GOLGA8HP0CJ92 632 aa7.78□□□□□ -1.16
PRPF8-210ENST00000574217 BCRP11274 1271 aa7.78□□□□□ -1.16
PRPF8-210ENST00000574217 BMP3P12645 472 aa7.78□□□□□ -1.16
PRPF8-210ENST00000574217 ADD1P35611 737 aaKnown RBP7.78□□□□□ -1.16
PRPF8-210ENST00000574217 STAT2P52630 851 aa7.78□□□□□ -1.16
PRPF8-210ENST00000574217 HERVK_113P62684 666 aa7.78□□□□□ -1.16
PRPF8-210ENST00000574217 IRX3P78415 501 aaPredicted RBP7.78□□□□□ -1.16
PRPF8-210ENST00000574217 IKQ13123 557 aaPredicted RBP7.78□□□□□ -1.16
PRPF8-210ENST00000574217 CUL4AQ13619 759 aa7.78□□□□□ -1.16
PRPF8-210ENST00000574217 FAM83BQ5T0W9 1011 aa7.78□□□□□ -1.16
PRPF8-210ENST00000574217 C17orf99Q6UX52 265 aa7.78□□□□□ -1.16
PRPF8-210ENST00000574217 TMTC3Q6ZXV5 915 aa7.78□□□□□ -1.16
PRPF8-210ENST00000574217 KCTD1Q719H9 257 aa7.78□□□□□ -1.16
PRPF8-210ENST00000574217 STAG2Q8N3U4 1231 aa7.78□□□□□ -1.16
PRPF8-210ENST00000574217 SMCR8Q8TEV9 937 aaPredicted RBP7.78□□□□□ -1.16
PRPF8-210ENST00000574217 ZNF296Q8WUU4 475 aaPredicted RBP7.78□□□□□ -1.16
PRPF8-210ENST00000574217 NUP88Q99567 741 aaPredicted RBP7.78□□□□□ -1.16
PRPF8-210ENST00000574217 LZTS2Q9BRK4 669 aa7.78□□□□□ -1.16
PRPF8-210ENST00000574217 TANGO6Q9C0B7 1094 aa7.78□□□□□ -1.16
PRPF8-210ENST00000574217 GPCPD1Q9NPB8 672 aa7.78□□□□□ -1.16
PRPF8-210ENST00000574217 FAM217BQ9NTX9 383 aaPredicted RBP7.78□□□□□ -1.16
PRPF8-210ENST00000574217 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.78□□□□□ -1.16
PRPF8-210ENST00000574217 A0A0G2JMZ2 1700 aa7.78□□□□□ -1.16
PRPF8-210ENST00000574217 TMEM232C9JQI7 657 aa7.77□□□□□ -1.17
PRPF8-210ENST00000574217 ABCB7O75027 752 aa7.77□□□□□ -1.17
PRPF8-210ENST00000574217 FKTNO75072 461 aa7.77□□□□□ -1.17
PRPF8-210ENST00000574217 ECM2O94769 699 aaPredicted RBP7.77□□□□□ -1.17
PRPF8-210ENST00000574217 PLEKHA8P1O95397 391 aa7.77□□□□□ -1.17
PRPF8-210ENST00000574217 IFNAR1P17181 557 aa7.77□□□□□ -1.17
PRPF8-210ENST00000574217 SMARCA1P28370 1054 aa7.77□□□□□ -1.17
PRPF8-210ENST00000574217 CAP1Q01518 475 aa7.77□□□□□ -1.17
PRPF8-210ENST00000574217 SP3Q02447 781 aa7.77□□□□□ -1.17
PRPF8-210ENST00000574217 ST3GAL1Q11201 340 aa7.77□□□□□ -1.17
PRPF8-210ENST00000574217 NTRK3Q16288 839 aa7.77□□□□□ -1.17
PRPF8-210ENST00000574217 NOM1Q5C9Z4 860 aaKnown RBP7.77□□□□□ -1.17
PRPF8-210ENST00000574217 POTEEQ6S8J3 1075 aa7.77□□□□□ -1.17
PRPF8-210ENST00000574217 FAM160B2Q86V87 743 aa7.77□□□□□ -1.17
PRPF8-210ENST00000574217 TRIM22Q8IYM9 498 aa7.77□□□□□ -1.17
PRPF8-210ENST00000574217 CCDC82Q8N4S0 544 aa7.77□□□□□ -1.17
PRPF8-210ENST00000574217 ANKRD13CQ8N6S4 541 aa7.77□□□□□ -1.17
PRPF8-210ENST00000574217 CD99L2Q8TCZ2 262 aa7.77□□□□□ -1.17
PRPF8-210ENST00000574217 CHURC1Q8WUH1 139 aa7.77□□□□□ -1.17
PRPF8-210ENST00000574217 INTS4Q96HW7 963 aaKnown RBP7.77□□□□□ -1.17
PRPF8-210ENST00000574217 LLPHQ9BRT6 129 aaKnown RBP7.77□□□□□ -1.17
PRPF8-210ENST00000574217 PRDM10Q9NQV6 1147 aa7.77□□□□□ -1.17
PRPF8-210ENST00000574217 FBXO28Q9NVF7 368 aa7.77□□□□□ -1.17
PRPF8-210ENST00000574217 FEM1BQ9UK73 627 aa7.77□□□□□ -1.17
PRPF8-210ENST00000574217 PTPDC1A2A3K4 754 aa7.76□□□□□ -1.17
PRPF8-210ENST00000574217 SPDYE16A6NNV3 312 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms