RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 TSPY2A6NKD2 308 aa13.44□□□□□ -0.26
RPAIN-214ENST00000574003 STRNO43815 780 aa13.44□□□□□ -0.26
RPAIN-214ENST00000574003 HSPD1P10809 573 aaKnown RBP13.44□□□□□ -0.26
RPAIN-214ENST00000574003 FCER1AP12319 257 aa13.44□□□□□ -0.26
RPAIN-214ENST00000574003 CYBAP13498 195 aa13.44□□□□□ -0.26
RPAIN-214ENST00000574003 TAL1P17542 331 aaPredicted RBP13.44□□□□□ -0.26
RPAIN-214ENST00000574003 MCCP23508 829 aa13.44□□□□□ -0.26
RPAIN-214ENST00000574003 ALX1Q15699 326 aa13.44□□□□□ -0.26
RPAIN-214ENST00000574003 OLFML2BQ68BL8 750 aa13.44□□□□□ -0.26
RPAIN-214ENST00000574003 SNRNP48Q6IEG0 339 aaKnown RBP13.44□□□□□ -0.26
RPAIN-214ENST00000574003 ANKLE1Q8NAG6 615 aa13.44□□□□□ -0.26
RPAIN-214ENST00000574003 MAML3Q96JK9 1138 aa13.44□□□□□ -0.26
RPAIN-214ENST00000574003 NBPF3Q9H094 633 aa13.44□□□□□ -0.26
RPAIN-214ENST00000574003 TOMM22Q9NS69 142 aa13.44□□□□□ -0.26
RPAIN-214ENST00000574003 DDX20Q9UHI6 824 aaKnown RBP13.44□□□□□ -0.26
RPAIN-214ENST00000574003 STX8Q9UNK0 236 aa13.44□□□□□ -0.26
RPAIN-214ENST00000574003 TMEM232C9JQI7 657 aa13.43□□□□□ -0.26
RPAIN-214ENST00000574003 SLC25A27O95847 323 aa13.43□□□□□ -0.26
RPAIN-214ENST00000574003 SYN1P17600 705 aa13.43□□□□□ -0.26
RPAIN-214ENST00000574003 KCTD1Q719H9 257 aa13.43□□□□□ -0.26
RPAIN-214ENST00000574003 TBC1D10CQ8IV04 446 aa13.43□□□□□ -0.26
RPAIN-214ENST00000574003 GMCL1P1Q8NEA9 526 aa13.43□□□□□ -0.26
RPAIN-214ENST00000574003 RBM27Q9P2N5 1060 aaKnown RBP13.43□□□□□ -0.26
RPAIN-214ENST00000574003 ANAPC4Q9UJX5 808 aa13.43□□□□□ -0.26
RPAIN-214ENST00000574003 PLXNA1Q9UIW2 1896 aa13.42□□□□□ -0.26
RPAIN-214ENST00000574003 RANBP2P49792 3224 aaKnown RBP13.42□□□□□ -0.26
RPAIN-214ENST00000574003 MYCNP04198 464 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-214ENST00000574003 COL6A1P12109 1028 aa13.42□□□□□ -0.26
RPAIN-214ENST00000574003 BMP3P12645 472 aa13.42□□□□□ -0.26
RPAIN-214ENST00000574003 KCTD2Q14681 263 aa13.42□□□□□ -0.26
RPAIN-214ENST00000574003 LRRC26Q2I0M4 334 aa13.42□□□□□ -0.26
RPAIN-214ENST00000574003 ZNF792Q3KQV3 632 aa13.42□□□□□ -0.26
RPAIN-214ENST00000574003 GJC2Q5T442 439 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-214ENST00000574003 CWC27Q6UX04 472 aaKnown RBP13.42□□□□□ -0.26
RPAIN-214ENST00000574003 PRPF38AQ8NAV1 312 aaKnown RBP13.42□□□□□ -0.26
RPAIN-214ENST00000574003 LENG1Q96BZ8 264 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-214ENST00000574003 TEX13BQ9BXU2 312 aa13.42□□□□□ -0.26
RPAIN-214ENST00000574003 IL25Q9H293 177 aa13.42□□□□□ -0.26
RPAIN-214ENST00000574003 OSBPL3Q9H4L5 887 aa13.42□□□□□ -0.26
RPAIN-214ENST00000574003 FEM1BQ9UK73 627 aa13.42□□□□□ -0.26
RPAIN-214ENST00000574003 NR2E3Q9Y5X4 410 aa13.42□□□□□ -0.26
RPAIN-214ENST00000574003 ORC4O43929 436 aa13.41□□□□□ -0.26
RPAIN-214ENST00000574003 ZBED4O75132 1171 aa13.41□□□□□ -0.26
RPAIN-214ENST00000574003 FGRP09769 529 aa13.41□□□□□ -0.26
RPAIN-214ENST00000574003 FXR1P51114 621 aaKnown RBP eCLIP13.41□□□□□ -0.26
RPAIN-214ENST00000574003 ATN1P54259 1190 aaPredicted RBP13.41□□□□□ -0.26
RPAIN-214ENST00000574003 TTBK2Q6IQ55 1244 aa13.41□□□□□ -0.26
RPAIN-214ENST00000574003 ABRAQ8N0Z2 381 aa13.41□□□□□ -0.26
RPAIN-214ENST00000574003 SENP6Q9GZR1 1112 aaPredicted RBP13.41□□□□□ -0.26
RPAIN-214ENST00000574003 SLC38A10Q9HBR0 1119 aa13.41□□□□□ -0.26
RPAIN-214ENST00000574003 HOMER2Q9NSB8 354 aa13.41□□□□□ -0.26
RPAIN-214ENST00000574003 CTDP1Q9Y5B0 961 aaPredicted RBP13.41□□□□□ -0.26
RPAIN-214ENST00000574003 MCM3APO60318 1980 aa13.41□□□□□ -0.26
RPAIN-214ENST00000574003 GSPT1P15170 499 aaKnown RBP13.4□□□□□ -0.26
RPAIN-214ENST00000574003 SLC1A4P43007 532 aa13.4□□□□□ -0.26
RPAIN-214ENST00000574003 IKQ13123 557 aaPredicted RBP13.4□□□□□ -0.26
RPAIN-214ENST00000574003 CCDC174Q6PII3 467 aa13.4□□□□□ -0.26
RPAIN-214ENST00000574003 AGBL1Q96MI9 1066 aa13.4□□□□□ -0.26
RPAIN-214ENST00000574003 PRO3102Q9H379 93 aa13.4□□□□□ -0.26
RPAIN-214ENST00000574003 DIAPH3Q9NSV4 1193 aa13.4□□□□□ -0.26
RPAIN-214ENST00000574003 DDX49Q9Y6V7 483 aaKnown RBP13.4□□□□□ -0.26
RPAIN-214ENST00000574003 NEDD4P46934 1319 aa13.39□□□□□ -0.27
RPAIN-214ENST00000574003 FRMPD2Q68DX3 1309 aaPredicted RBP13.39□□□□□ -0.27
RPAIN-214ENST00000574003 SEPT4O43236 478 aa13.39□□□□□ -0.27
RPAIN-214ENST00000574003 CAPN2P17655 700 aa13.39□□□□□ -0.27
RPAIN-214ENST00000574003 SLC16A2P36021 539 aa13.39□□□□□ -0.27
RPAIN-214ENST00000574003 STAT2P52630 851 aa13.39□□□□□ -0.27
RPAIN-214ENST00000574003 CCDC96Q2M329 555 aa13.39□□□□□ -0.27
RPAIN-214ENST00000574003 GMCL1Q96IK5 515 aa13.39□□□□□ -0.27
RPAIN-214ENST00000574003 FGD4Q96M96 766 aa13.39□□□□□ -0.27
RPAIN-214ENST00000574003 TMEM47Q9BQJ4 181 aa13.39□□□□□ -0.27
RPAIN-214ENST00000574003 ZKSCAN3Q9BRR0 538 aa13.39□□□□□ -0.27
RPAIN-214ENST00000574003 TINF2Q9BSI4 451 aa13.39□□□□□ -0.27
RPAIN-214ENST00000574003 SLC5A4Q9NY91 659 aa13.39□□□□□ -0.27
RPAIN-214ENST00000574003 ZNF536O15090 1300 aa13.39□□□□□ -0.27
RPAIN-214ENST00000574003 ATP2A1O14983 1001 aa13.38□□□□□ -0.27
RPAIN-214ENST00000574003 NOVP48745 357 aa13.38□□□□□ -0.27
RPAIN-214ENST00000574003 AKNAD1Q5T1N1 836 aa13.38□□□□□ -0.27
RPAIN-214ENST00000574003 RCSD1Q6JBY9 416 aa13.38□□□□□ -0.27
RPAIN-214ENST00000574003 STAG1Q8WVM7 1258 aa13.38□□□□□ -0.27
RPAIN-214ENST00000574003 FERMT2Q96AC1 680 aa13.38□□□□□ -0.27
RPAIN-214ENST00000574003 DDX11Q96FC9 970 aa13.38□□□□□ -0.27
RPAIN-214ENST00000574003 GPCPD1Q9NPB8 672 aa13.38□□□□□ -0.27
RPAIN-214ENST00000574003 PRR12Q9ULL5 1215 aa13.38□□□□□ -0.27
RPAIN-214ENST00000574003 SYNPO2Q9UMS6 1093 aa13.38□□□□□ -0.27
RPAIN-214ENST00000574003 DNAJC25-GNG10A0A024R161 153 aa13.37□□□□□ -0.27
RPAIN-214ENST00000574003 SNAI1O95863 264 aaPredicted RBP13.37□□□□□ -0.27
RPAIN-214ENST00000574003 PGK1P00558 417 aa13.37□□□□□ -0.27
RPAIN-214ENST00000574003 ZNF865P0CJ78 1059 aaPredicted RBP13.37□□□□□ -0.27
RPAIN-214ENST00000574003 COPB2P35606 906 aa13.37□□□□□ -0.27
RPAIN-214ENST00000574003 IRX5P78411 483 aaPredicted RBP13.37□□□□□ -0.27
RPAIN-214ENST00000574003 CNTN2Q02246 1040 aa13.37□□□□□ -0.27
RPAIN-214ENST00000574003 TTC22Q5TAA0 569 aa13.37□□□□□ -0.27
RPAIN-214ENST00000574003 MFSD6Q6ZSS7 791 aa13.37□□□□□ -0.27
RPAIN-214ENST00000574003 SKAP1Q86WV1 359 aa13.37□□□□□ -0.27
RPAIN-214ENST00000574003 PURBQ96QR8 312 aaKnown RBP13.37□□□□□ -0.27
RPAIN-214ENST00000574003 RNF146Q9NTX7 359 aa13.37□□□□□ -0.27
RPAIN-214ENST00000574003 ZMYM6O95789 1325 aa13.37□□□□□ -0.27
RPAIN-214ENST00000574003 DNM1LO00429 736 aa13.36□□□□□ -0.27
RPAIN-214ENST00000574003 MSCO60682 206 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms