RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 C16orf59Q7L2K0 433 aa14.73□□□□□ -0.05
PRPF8-208ENST00000573716 SIAH1Q8IUQ4 282 aa14.73□□□□□ -0.05
PRPF8-208ENST00000573716 LCORLQ8N3X6 602 aa14.73□□□□□ -0.05
PRPF8-208ENST00000573716 TMEM199Q8N511 208 aa14.73□□□□□ -0.05
PRPF8-208ENST00000573716 DDX11Q96FC9 970 aa14.73□□□□□ -0.05
PRPF8-208ENST00000573716 GLT1D1Q96MS3 346 aa14.73□□□□□ -0.05
PRPF8-208ENST00000573716 DCP1AQ9NPI6 582 aaPredicted RBP14.73□□□□□ -0.05
PRPF8-208ENST00000573716 SWAP70Q9UH65 585 aa14.73□□□□□ -0.05
PRPF8-208ENST00000573716 DIS3Q9Y2L1 958 aaKnown RBP14.73□□□□□ -0.05
PRPF8-208ENST00000573716 ROBO3Q96MS0 1386 aa14.73□□□□□ -0.05
PRPF8-208ENST00000573716 MROH7Q68CQ1 1323 aa14.72□□□□□ -0.05
PRPF8-208ENST00000573716 ZNF532Q9HCE3 1301 aa14.72□□□□□ -0.05
PRPF8-208ENST00000573716 VWA5AO00534 786 aa14.72□□□□□ -0.05
PRPF8-208ENST00000573716 IRX5P78411 483 aaPredicted RBP14.72□□□□□ -0.05
PRPF8-208ENST00000573716 ADGRE1Q14246 886 aa14.72□□□□□ -0.05
PRPF8-208ENST00000573716 NECAB3Q96P71 396 aaPredicted RBP14.72□□□□□ -0.05
PRPF8-208ENST00000573716 DNAJC2Q99543 621 aaKnown RBP14.72□□□□□ -0.05
PRPF8-208ENST00000573716 NKX2-4Q9H2Z4 354 aa14.72□□□□□ -0.05
PRPF8-208ENST00000573716 ARMT1Q9H993 441 aa14.72□□□□□ -0.05
PRPF8-208ENST00000573716 CYP2D7A0A087X1C5 515 aa14.71□□□□□ -0.05
PRPF8-208ENST00000573716 TLR3O15455 904 aaKnown RBP14.71□□□□□ -0.05
PRPF8-208ENST00000573716 EEF2P13639 858 aaKnown RBP14.71□□□□□ -0.05
PRPF8-208ENST00000573716 COPB2P35606 906 aa14.71□□□□□ -0.05
PRPF8-208ENST00000573716 TTF1Q15361 905 aaPredicted RBP14.71□□□□□ -0.05
PRPF8-208ENST00000573716 RAB30Q15771 203 aa14.71□□□□□ -0.05
PRPF8-208ENST00000573716 FAM83BQ5T0W9 1011 aa14.71□□□□□ -0.05
PRPF8-208ENST00000573716 PSRC1Q6PGN9 363 aaPredicted RBP14.71□□□□□ -0.05
PRPF8-208ENST00000573716 TMED8Q6PL24 325 aaPredicted RBP14.71□□□□□ -0.05
PRPF8-208ENST00000573716 KLHDC9Q8NEP7 349 aa14.71□□□□□ -0.05
PRPF8-208ENST00000573716 TSPYL2Q9H2G4 693 aaPredicted RBP14.71□□□□□ -0.05
PRPF8-208ENST00000573716 SLC28A3Q9HAS3 691 aa14.71□□□□□ -0.05
PRPF8-208ENST00000573716 SPC25Q9HBM1 224 aa14.71□□□□□ -0.05
PRPF8-208ENST00000573716 PPP1R9AQ9ULJ8 1098 aa14.71□□□□□ -0.05
PRPF8-208ENST00000573716 NOP58Q9Y2X3 529 aaKnown RBP14.71□□□□□ -0.05
PRPF8-208ENST00000573716 MCM3APO60318 1980 aa14.71□□□□□ -0.06
PRPF8-208ENST00000573716 A0A0U1RQG5 324 aaPredicted RBP14.7□□□□□ -0.06
PRPF8-208ENST00000573716 GOLIM4O00461 696 aa14.7□□□□□ -0.06
PRPF8-208ENST00000573716 ASGR1P07306 291 aa14.7□□□□□ -0.06
PRPF8-208ENST00000573716 CYP2C18P33260 490 aa14.7□□□□□ -0.06
PRPF8-208ENST00000573716 SNRNP48Q6IEG0 339 aaKnown RBP14.7□□□□□ -0.06
PRPF8-208ENST00000573716 AMOTL1Q8IY63 956 aa14.7□□□□□ -0.06
PRPF8-208ENST00000573716 PCSK9Q8NBP7 692 aaKnown RBP14.7□□□□□ -0.06
PRPF8-208ENST00000573716 GOPCQ9HD26 462 aa14.7□□□□□ -0.06
PRPF8-208ENST00000573716 IL1RAPL2Q9NP60 686 aa14.7□□□□□ -0.06
PRPF8-208ENST00000573716 ZNF214Q9UL59 606 aaPredicted RBP14.7□□□□□ -0.06
PRPF8-208ENST00000573716 EXOC6BQ9Y2D4 811 aa14.7□□□□□ -0.06
PRPF8-208ENST00000573716 ELP1O95163 1332 aa14.69□□□□□ -0.06
PRPF8-208ENST00000573716 MUC3AQ02505 3323 aa14.69□□□□□ -0.06
PRPF8-208ENST00000573716 SMIM22K7EJ46 135 aa14.69□□□□□ -0.06
PRPF8-208ENST00000573716 ARVCFO00192 962 aa14.69□□□□□ -0.06
PRPF8-208ENST00000573716 PRKAB2O43741 272 aa14.69□□□□□ -0.06
PRPF8-208ENST00000573716 DUSP11O75319 330 aaKnown RBP14.69□□□□□ -0.06
PRPF8-208ENST00000573716 SNAI1O95863 264 aaPredicted RBP14.69□□□□□ -0.06
PRPF8-208ENST00000573716 CDK8P49336 464 aa14.69□□□□□ -0.06
PRPF8-208ENST00000573716 SKIV2LQ15477 1246 aaKnown RBP14.69□□□□□ -0.06
PRPF8-208ENST00000573716 GNASQ5JWF2 1037 aa14.69□□□□□ -0.06
PRPF8-208ENST00000573716 RASIP1Q5U651 963 aa14.69□□□□□ -0.06
PRPF8-208ENST00000573716 ZKSCAN2Q63HK3 967 aa14.69□□□□□ -0.06
PRPF8-208ENST00000573716 ITPRIPQ8IWB1 547 aa14.69□□□□□ -0.06
PRPF8-208ENST00000573716 FTSJ3Q8IY81 847 aaKnown RBP14.69□□□□□ -0.06
PRPF8-208ENST00000573716 CCDC17Q96LX7 622 aa14.69□□□□□ -0.06
PRPF8-208ENST00000573716 NUP88Q99567 741 aaPredicted RBP14.69□□□□□ -0.06
PRPF8-208ENST00000573716 MTIF3Q9H2K0 278 aaKnown RBP14.69□□□□□ -0.06
PRPF8-208ENST00000573716 CXXC1Q9P0U4 656 aaPredicted RBP14.69□□□□□ -0.06
PRPF8-208ENST00000573716 ADAMTS5Q9UNA0 930 aa14.69□□□□□ -0.06
PRPF8-208ENST00000573716 CTDP1Q9Y5B0 961 aaPredicted RBP14.69□□□□□ -0.06
PRPF8-208ENST00000573716 SYNGAP1Q96PV0 1343 aa14.68□□□□□ -0.06
PRPF8-208ENST00000573716 MBD4O95243 580 aa14.68□□□□□ -0.06
PRPF8-208ENST00000573716 CDK7P50613 346 aa14.68□□□□□ -0.06
PRPF8-208ENST00000573716 ACVR2BQ13705 512 aa14.68□□□□□ -0.06
PRPF8-208ENST00000573716 CCSAPQ6IQ19 270 aaPredicted RBP14.68□□□□□ -0.06
PRPF8-208ENST00000573716 NOL8Q76FK4 1167 aaKnown RBP14.68□□□□□ -0.06
PRPF8-208ENST00000573716 OTOP2Q7RTS6 562 aa14.68□□□□□ -0.06
PRPF8-208ENST00000573716 ERC1Q8IUD2 1116 aa14.68□□□□□ -0.06
PRPF8-208ENST00000573716 CPXCR1Q8N123 301 aa14.68□□□□□ -0.06
PRPF8-208ENST00000573716 SLF1Q9BQI6 1058 aa14.68□□□□□ -0.06
PRPF8-208ENST00000573716 TEX13BQ9BXU2 312 aa14.68□□□□□ -0.06
PRPF8-208ENST00000573716 KANSL2Q9H9L4 492 aa14.68□□□□□ -0.06
PRPF8-208ENST00000573716 IL23AQ9NPF7 189 aa14.68□□□□□ -0.06
PRPF8-208ENST00000573716 YBX2Q9Y2T7 364 aaKnown RBP14.68□□□□□ -0.06
PRPF8-208ENST00000573716 CHD9Q3L8U1 2897 aa14.68□□□□□ -0.06
PRPF8-208ENST00000573716 ADCY6O43306 1168 aa14.67□□□□□ -0.06
PRPF8-208ENST00000573716 FGBP02675 491 aa14.67□□□□□ -0.06
PRPF8-208ENST00000573716 RABGGTBP53611 331 aa14.67□□□□□ -0.06
PRPF8-208ENST00000573716 BEX3Q00994 111 aa14.67□□□□□ -0.06
PRPF8-208ENST00000573716 TFF2Q03403 129 aa14.67□□□□□ -0.06
PRPF8-208ENST00000573716 CCDC144BQ3MJ40 725 aa14.67□□□□□ -0.06
PRPF8-208ENST00000573716 SLFNL1Q499Z3 407 aa14.67□□□□□ -0.06
PRPF8-208ENST00000573716 FAM126BQ8IXS8 530 aa14.67□□□□□ -0.06
PRPF8-208ENST00000573716 MSL3Q8N5Y2 521 aaKnown RBP14.67□□□□□ -0.06
PRPF8-208ENST00000573716 REPS2Q8NFH8 660 aa14.67□□□□□ -0.06
PRPF8-208ENST00000573716 HERVK_113Q902F9 699 aa14.67□□□□□ -0.06
PRPF8-208ENST00000573716 DDRGK1Q96HY6 314 aa14.67□□□□□ -0.06
PRPF8-208ENST00000573716 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.67□□□□□ -0.06
PRPF8-208ENST00000573716 TCRBV5S4A2TA0A5A2 114 aa14.66□□□□□ -0.06
PRPF8-208ENST00000573716 USP17L12C9JPN9 530 aa14.66□□□□□ -0.06
PRPF8-208ENST00000573716 USP17L21D6R901 530 aa14.66□□□□□ -0.06
PRPF8-208ENST00000573716 CST5P28325 142 aaPredicted RBP14.66□□□□□ -0.06
PRPF8-208ENST00000573716 CCL23P55773 120 aa14.66□□□□□ -0.06
PRPF8-208ENST00000573716 C12orf60Q5U649 245 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms