RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 KIFC2Q96AC6 838 aa15.9■□□□□ 0.14
TVP23A-207ENST00000573360 TMEM260Q9NX78 707 aa15.9■□□□□ 0.14
TVP23A-207ENST00000573360 SWAP70Q9UH65 585 aa15.9■□□□□ 0.14
TVP23A-207ENST00000573360 TRIM75PA6NK02 468 aa15.9■□□□□ 0.14
TVP23A-207ENST00000573360 F5H6K3 240 aa15.9■□□□□ 0.14
TVP23A-207ENST00000573360 GABPAQ06546 454 aa15.9■□□□□ 0.14
TVP23A-207ENST00000573360 KLRC3Q07444 240 aa15.9■□□□□ 0.14
TVP23A-207ENST00000573360 GRM4Q14833 912 aa15.9■□□□□ 0.14
TVP23A-207ENST00000573360 SYT17Q9BSW7 474 aa15.9■□□□□ 0.14
TVP23A-207ENST00000573360 DDX19AQ9NUU7 478 aaKnown RBP15.9■□□□□ 0.14
TVP23A-207ENST00000573360 SCN9AQ15858 1988 aa15.9■□□□□ 0.14
TVP23A-207ENST00000573360 RCOR1Q9UKL0 485 aa15.89■□□□□ 0.13
TVP23A-207ENST00000573360 FUT2Q10981 343 aa15.89■□□□□ 0.13
TVP23A-207ENST00000573360 KIF4BQ2VIQ3 1234 aa15.89■□□□□ 0.13
TVP23A-207ENST00000573360 EAPPQ56P03 285 aaPredicted RBP15.89■□□□□ 0.13
TVP23A-207ENST00000573360 CCDC178Q5BJE1 867 aa15.89■□□□□ 0.13
TVP23A-207ENST00000573360 USP49Q70CQ1 688 aa15.89■□□□□ 0.13
TVP23A-207ENST00000573360 CPXCR1Q8N123 301 aa15.89■□□□□ 0.13
TVP23A-207ENST00000573360 KCNG4Q8TDN1 519 aa15.89■□□□□ 0.13
TVP23A-207ENST00000573360 HACL1Q9UJ83 578 aa15.89■□□□□ 0.13
TVP23A-207ENST00000573360 TTLL12Q14166 644 aaPredicted RBP15.89■□□□□ 0.13
TVP23A-207ENST00000573360 TPD52L1Q16890 204 aaPredicted RBP15.89■□□□□ 0.13
TVP23A-207ENST00000573360 HSP90AA4PQ58FG1 418 aa15.89■□□□□ 0.13
TVP23A-207ENST00000573360 TRMT1LQ7Z2T5 733 aaKnown RBP15.89■□□□□ 0.13
TVP23A-207ENST00000573360 FOXP4Q8IVH2 680 aaPredicted RBP15.89■□□□□ 0.13
TVP23A-207ENST00000573360 PRIMPOLQ96LW4 560 aa15.89■□□□□ 0.13
TVP23A-207ENST00000573360 KANSL2Q9H9L4 492 aa15.89■□□□□ 0.13
TVP23A-207ENST00000573360 PFKFB3Q16875 520 aaPredicted RBP15.88■□□□□ 0.13
TVP23A-207ENST00000573360 NBPF12Q5TAG4 269 aaPredicted RBP15.88■□□□□ 0.13
TVP23A-207ENST00000573360 CREBRFQ8IUR6 639 aa15.88■□□□□ 0.13
TVP23A-207ENST00000573360 ZNF408Q9H9D4 720 aa15.88■□□□□ 0.13
TVP23A-207ENST00000573360 HOMER2Q9NSB8 354 aa15.88■□□□□ 0.13
TVP23A-207ENST00000573360 RTEL1Q9NZ71 1219 aa15.88■□□□□ 0.13
TVP23A-207ENST00000573360 MYO3BQ8WXR4 1341 aa15.88■□□□□ 0.13
TVP23A-207ENST00000573360 TULP1O00294 542 aaPredicted RBP15.88■□□□□ 0.13
TVP23A-207ENST00000573360 AFMP43652 599 aa15.88■□□□□ 0.13
TVP23A-207ENST00000573360 TOB1P50616 345 aaPredicted RBP15.88■□□□□ 0.13
TVP23A-207ENST00000573360 BLIDQ8IZY5 108 aa15.88■□□□□ 0.13
TVP23A-207ENST00000573360 DEFB129Q9H1M3 183 aa15.88■□□□□ 0.13
TVP23A-207ENST00000573360 TPM3P06753 285 aa15.88■□□□□ 0.13
TVP23A-207ENST00000573360 FCHSD1Q86WN1 690 aa15.88■□□□□ 0.13
TVP23A-207ENST00000573360 GRAMD1CQ8IYS0 662 aa15.88■□□□□ 0.13
TVP23A-207ENST00000573360 ADGRF4Q8IZF3 695 aa15.88■□□□□ 0.13
TVP23A-207ENST00000573360 JMYQ8N9B5 988 aa15.88■□□□□ 0.13
TVP23A-207ENST00000573360 TRPM4Q8TD43 1214 aa15.88■□□□□ 0.13
TVP23A-207ENST00000573360 ZNF526Q8TF50 670 aaPredicted RBP15.88■□□□□ 0.13
TVP23A-207ENST00000573360 IDI2Q9BXS1 227 aa15.88■□□□□ 0.13
TVP23A-207ENST00000573360 SPDYE4A6NLX3 237 aa15.87■□□□□ 0.13
TVP23A-207ENST00000573360 SYKP43405 635 aa15.87■□□□□ 0.13
TVP23A-207ENST00000573360 MTERF4Q7Z6M4 381 aaKnown RBP15.87■□□□□ 0.13
TVP23A-207ENST00000573360 FBXO28Q9NVF7 368 aa15.87■□□□□ 0.13
TVP23A-207ENST00000573360 GGA3Q9NZ52 723 aa15.87■□□□□ 0.13
TVP23A-207ENST00000573360 PFKFB1P16118 471 aa15.87■□□□□ 0.13
TVP23A-207ENST00000573360 HDLBPQ00341 1268 aaKnown RBP15.87■□□□□ 0.13
TVP23A-207ENST00000573360 TTC38Q5R3I4 469 aa15.87■□□□□ 0.13
TVP23A-207ENST00000573360 GJA10Q969M2 543 aa15.87■□□□□ 0.13
TVP23A-207ENST00000573360 CCDC17Q96LX7 622 aa15.87■□□□□ 0.13
TVP23A-207ENST00000573360 FUCA2Q9BTY2 467 aa15.87■□□□□ 0.13
TVP23A-207ENST00000573360 KCNF1Q9H3M0 494 aa15.87■□□□□ 0.13
TVP23A-207ENST00000573360 SNED1Q8TER0 1413 aa15.87■□□□□ 0.13
TVP23A-207ENST00000573360 PCNTO95613 3336 aa15.87■□□□□ 0.13
TVP23A-207ENST00000573360 A0A1W2PRG0 241 aa15.87■□□□□ 0.13
TVP23A-207ENST00000573360 USP17L15C9J2P7 530 aa15.87■□□□□ 0.13
TVP23A-207ENST00000573360 USP17L13C9JLJ4 530 aa15.87■□□□□ 0.13
TVP23A-207ENST00000573360 USP17L11C9JVI0 530 aa15.87■□□□□ 0.13
TVP23A-207ENST00000573360 USP17L18D6R9N7 530 aa15.87■□□□□ 0.13
TVP23A-207ENST00000573360 USP17L22D6RA61 530 aa15.87■□□□□ 0.13
TVP23A-207ENST00000573360 USP17L17D6RBQ6 530 aa15.87■□□□□ 0.13
TVP23A-207ENST00000573360 USP17L19D6RCP7 530 aa15.87■□□□□ 0.13
TVP23A-207ENST00000573360 USP17L20D6RJB6 530 aa15.87■□□□□ 0.13
TVP23A-207ENST00000573360 RIOK3O14730 519 aaKnown RBP15.87■□□□□ 0.13
TVP23A-207ENST00000573360 INPP5BP32019 993 aa15.87■□□□□ 0.13
TVP23A-207ENST00000573360 USP17L24Q0WX57 530 aa15.87■□□□□ 0.13
TVP23A-207ENST00000573360 PTGDRQ13258 359 aa15.87■□□□□ 0.13
TVP23A-207ENST00000573360 PPP2R5BQ15173 497 aa15.87■□□□□ 0.13
TVP23A-207ENST00000573360 USP17L6PQ6QN14 398 aa15.87■□□□□ 0.13
TVP23A-207ENST00000573360 ZKSCAN4Q969J2 545 aaPredicted RBP15.87■□□□□ 0.13
TVP23A-207ENST00000573360 DHX58Q96C10 678 aa15.87■□□□□ 0.13
TVP23A-207ENST00000573360 CCDC88AQ3V6T2 1871 aa15.86■□□□□ 0.13
TVP23A-207ENST00000573360 NDUFB10O96000 172 aa15.86■□□□□ 0.13
TVP23A-207ENST00000573360 FAM83BQ5T0W9 1011 aa15.86■□□□□ 0.13
TVP23A-207ENST00000573360 TMED8Q6PL24 325 aaPredicted RBP15.86■□□□□ 0.13
TVP23A-207ENST00000573360 AGBL3Q8NEM8 1001 aa15.86■□□□□ 0.13
TVP23A-207ENST00000573360 GMLQ99445 158 aa15.86■□□□□ 0.13
TVP23A-207ENST00000573360 ZNF341Q9BYN7 854 aa15.86■□□□□ 0.13
TVP23A-207ENST00000573360 DOCK2Q92608 1830 aa15.86■□□□□ 0.13
TVP23A-207ENST00000573360 PALM3A6NDB9 673 aaPredicted RBP15.86■□□□□ 0.13
TVP23A-207ENST00000573360 CASP1P29466 404 aa15.86■□□□□ 0.13
TVP23A-207ENST00000573360 UBXN2AP68543 259 aa15.86■□□□□ 0.13
TVP23A-207ENST00000573360 SLC39A14Q15043 492 aa15.86■□□□□ 0.13
TVP23A-207ENST00000573360 SPDYE2Q495Y8 402 aa15.86■□□□□ 0.13
TVP23A-207ENST00000573360 RILPL1Q5EBL4 403 aa15.86■□□□□ 0.13
TVP23A-207ENST00000573360 PPP4R3BQ5MIZ7 849 aa15.86■□□□□ 0.13
TVP23A-207ENST00000573360 KIAA1524Q8TCG1 905 aa15.86■□□□□ 0.13
TVP23A-207ENST00000573360 FAM151AQ8WW52 585 aa15.86■□□□□ 0.13
TVP23A-207ENST00000573360 EPSTI1Q96J88 318 aa15.86■□□□□ 0.13
TVP23A-207ENST00000573360 MTA3Q9BTC8 594 aa15.86■□□□□ 0.13
TVP23A-207ENST00000573360 POLR2DO15514 142 aaKnown RBP15.86■□□□□ 0.13
TVP23A-207ENST00000573360 CCNT1O60563 726 aaKnown RBP15.86■□□□□ 0.13
TVP23A-207ENST00000573360 TMEM179Q6ZVK1 233 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms