RNA–Protein interactions for RNA: ENST00000573270.1

LINC01996-201, Transcript of long intergenic non-protein coding RNA 1996, humanhuman

TSL 1 (best) BASIC

Gene LINC01996, Length 1,273 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01996-201ENST00000573270 USP17L13C9JLJ4 530 aa15.7■□□□□ 0.1
LINC01996-201ENST00000573270 USP17L11C9JVI0 530 aa15.7■□□□□ 0.1
LINC01996-201ENST00000573270 USP17L18D6R9N7 530 aa15.7■□□□□ 0.1
LINC01996-201ENST00000573270 USP17L22D6RA61 530 aa15.7■□□□□ 0.1
LINC01996-201ENST00000573270 USP17L17D6RBQ6 530 aa15.7■□□□□ 0.1
LINC01996-201ENST00000573270 USP17L19D6RCP7 530 aa15.7■□□□□ 0.1
LINC01996-201ENST00000573270 USP17L20D6RJB6 530 aa15.7■□□□□ 0.1
LINC01996-201ENST00000573270 CPLX1O14810 134 aa15.7■□□□□ 0.1
LINC01996-201ENST00000573270 DHX16O60231 1041 aaKnown RBP15.7■□□□□ 0.1
LINC01996-201ENST00000573270 IRX3P78415 501 aaPredicted RBP15.7■□□□□ 0.1
LINC01996-201ENST00000573270 USP17L24Q0WX57 530 aa15.7■□□□□ 0.1
LINC01996-201ENST00000573270 SYDE2Q5VT97 1194 aa15.7■□□□□ 0.1
LINC01996-201ENST00000573270 FAM43AQ8N2R8 423 aa15.7■□□□□ 0.1
LINC01996-201ENST00000573270 CCDC82Q8N4S0 544 aa15.7■□□□□ 0.1
LINC01996-201ENST00000573270 PIBF1Q8WXW3 757 aa15.7■□□□□ 0.1
LINC01996-201ENST00000573270 PHKBQ93100 1093 aa15.7■□□□□ 0.1
LINC01996-201ENST00000573270 KIFC2Q96AC6 838 aa15.7■□□□□ 0.1
LINC01996-201ENST00000573270 ATG4CQ96DT6 458 aa15.7■□□□□ 0.1
LINC01996-201ENST00000573270 PTPN18Q99952 460 aa15.7■□□□□ 0.1
LINC01996-201ENST00000573270 SLF1Q9BQI6 1058 aa15.7■□□□□ 0.1
LINC01996-201ENST00000573270 FEM1BQ9UK73 627 aa15.7■□□□□ 0.1
LINC01996-201ENST00000573270 WDR33Q9C0J8 1336 aaKnown RBP15.69■□□□□ 0.1
LINC01996-201ENST00000573270 BAZ2BQ9UIF8 2168 aaKnown RBP15.69■□□□□ 0.1
LINC01996-201ENST00000573270 CCDC196A0A1B0GTZ2 297 aa15.69■□□□□ 0.1
LINC01996-201ENST00000573270 hCG_1642624A0A1W2PR95 340 aa15.69■□□□□ 0.1
LINC01996-201ENST00000573270 PTPDC1A2A3K4 754 aa15.69■□□□□ 0.1
LINC01996-201ENST00000573270 TESPA1A2RU30 521 aaPredicted RBP15.69■□□□□ 0.1
LINC01996-201ENST00000573270 SPDYE16A6NNV3 312 aaPredicted RBP15.69■□□□□ 0.1
LINC01996-201ENST00000573270 PDHXO00330 501 aa15.69■□□□□ 0.1
LINC01996-201ENST00000573270 CYTH3O43739 400 aa15.69■□□□□ 0.1
LINC01996-201ENST00000573270 JAK2O60674 1132 aa15.69■□□□□ 0.1
LINC01996-201ENST00000573270 CTDNEP1O95476 244 aa15.69■□□□□ 0.1
LINC01996-201ENST00000573270 VEGFBP49765 207 aa15.69■□□□□ 0.1
LINC01996-201ENST00000573270 SNAP25P60880 206 aa15.69■□□□□ 0.1
LINC01996-201ENST00000573270 KIF23Q02241 960 aaPredicted RBP15.69■□□□□ 0.1
LINC01996-201ENST00000573270 FUT2Q10981 343 aa15.69■□□□□ 0.1
LINC01996-201ENST00000573270 SREBF2Q12772 1141 aa15.69■□□□□ 0.1
LINC01996-201ENST00000573270 NOGQ13253 232 aa15.69■□□□□ 0.1
LINC01996-201ENST00000573270 CATSPERGQ6ZRH7 1159 aa15.69■□□□□ 0.1
LINC01996-201ENST00000573270 ANKRD23Q86SG2 305 aa15.69■□□□□ 0.1
LINC01996-201ENST00000573270 FAM160B2Q86V87 743 aa15.69■□□□□ 0.1
LINC01996-201ENST00000573270 HOMER1Q86YM7 354 aa15.69■□□□□ 0.1
LINC01996-201ENST00000573270 ADGRF4Q8IZF3 695 aa15.69■□□□□ 0.1
LINC01996-201ENST00000573270 DNAJC5GQ8N7S2 189 aa15.69■□□□□ 0.1
LINC01996-201ENST00000573270 NSUN7Q8NE18 718 aaKnown RBP15.69■□□□□ 0.1
LINC01996-201ENST00000573270 SPZ1Q9BXG8 430 aa15.69■□□□□ 0.1
LINC01996-201ENST00000573270 ASCC2Q9H1I8 757 aaPredicted RBP15.69■□□□□ 0.1
LINC01996-201ENST00000573270 FOXD4L1Q9NU39 408 aa15.69■□□□□ 0.1
LINC01996-201ENST00000573270 PPP1R9AQ9ULJ8 1098 aa15.69■□□□□ 0.1
LINC01996-201ENST00000573270 PRR12Q9ULL5 1215 aa15.69■□□□□ 0.1
LINC01996-201ENST00000573270 ZSWIM8A7E2V4 1837 aa15.68■□□□□ 0.1
LINC01996-201ENST00000573270 IFNAR1P17181 557 aa15.68■□□□□ 0.1
LINC01996-201ENST00000573270 TAL1P17542 331 aaPredicted RBP15.68■□□□□ 0.1
LINC01996-201ENST00000573270 GNAQP50148 359 aa15.68■□□□□ 0.1
LINC01996-201ENST00000573270 PABPC4Q13310 644 aaKnown RBP eCLIP15.68■□□□□ 0.1
LINC01996-201ENST00000573270 CUL4AQ13619 759 aa15.68■□□□□ 0.1
LINC01996-201ENST00000573270 NTRK3Q16288 839 aa15.68■□□□□ 0.1
LINC01996-201ENST00000573270 CDC37Q16543 378 aaPredicted RBP15.68■□□□□ 0.1
LINC01996-201ENST00000573270 BTNL9Q6UXG8 535 aa15.68■□□□□ 0.1
LINC01996-201ENST00000573270 SLC26A6Q9BXS9 759 aa15.68■□□□□ 0.1
LINC01996-201ENST00000573270 PLXNB2O15031 1838 aa15.67■□□□□ 0.1
LINC01996-201ENST00000573270 CYP2C8P10632 490 aa15.67■□□□□ 0.1
LINC01996-201ENST00000573270 HOXA7P31268 230 aaPredicted RBP15.67■□□□□ 0.1
LINC01996-201ENST00000573270 BECN1Q14457 450 aa15.67■□□□□ 0.1
LINC01996-201ENST00000573270 PPP2R5BQ15173 497 aa15.67■□□□□ 0.1
LINC01996-201ENST00000573270 CPLX2Q6PUV4 134 aaKnown RBP15.67■□□□□ 0.1
LINC01996-201ENST00000573270 IFNL1Q8IU54 200 aa15.67■□□□□ 0.1
LINC01996-201ENST00000573270 CHURC1Q8WUH1 139 aa15.67■□□□□ 0.1
LINC01996-201ENST00000573270 LZTS2Q9BRK4 669 aa15.67■□□□□ 0.1
LINC01996-201ENST00000573270 VAT1LQ9HCJ6 419 aa15.67■□□□□ 0.1
LINC01996-201ENST00000573270 PNMA3Q9UL41 463 aa15.67■□□□□ 0.1
LINC01996-201ENST00000573270 MYPNQ86TC9 1320 aa15.67■□□□□ 0.1
LINC01996-201ENST00000573270 STK36Q9NRP7 1315 aa15.67■□□□□ 0.1
LINC01996-201ENST00000573270 PLA2G6O60733 806 aa15.66■□□□□ 0.1
LINC01996-201ENST00000573270 CDKL5O76039 1030 aa15.66■□□□□ 0.1
LINC01996-201ENST00000573270 FMNL1O95466 1100 aaPredicted RBP15.66■□□□□ 0.1
LINC01996-201ENST00000573270 OSBPP22059 807 aa15.66■□□□□ 0.1
LINC01996-201ENST00000573270 DSG3P32926 999 aa15.66■□□□□ 0.1
LINC01996-201ENST00000573270 HERVK_113P62684 666 aa15.66■□□□□ 0.1
LINC01996-201ENST00000573270 CCDC174Q6PII3 467 aa15.66■□□□□ 0.1
LINC01996-201ENST00000573270 DDX11Q96FC9 970 aa15.66■□□□□ 0.1
LINC01996-201ENST00000573270 PIGSQ96S52 555 aa15.66■□□□□ 0.1
LINC01996-201ENST00000573270 PARK7Q99497 189 aaKnown RBP15.66■□□□□ 0.1
LINC01996-201ENST00000573270 RANBP17Q9H2T7 1088 aaKnown RBP15.66■□□□□ 0.1
LINC01996-201ENST00000573270 RIOX1Q9H6W3 641 aa15.66■□□□□ 0.1
LINC01996-201ENST00000573270 JMJD4Q9H9V9 463 aa15.66■□□□□ 0.1
LINC01996-201ENST00000573270 SLC45A1Q9Y2W3 748 aa15.66■□□□□ 0.1
LINC01996-201ENST00000573270 ADGRA2Q96PE1 1338 aa15.66■□□□□ 0.1
LINC01996-201ENST00000573270 PEX10O60683 326 aa15.65■□□□□ 0.1
LINC01996-201ENST00000573270 FOSBP53539 338 aa15.65■□□□□ 0.1
LINC01996-201ENST00000573270 TAF1CQ15572 869 aaPredicted RBP15.65■□□□□ 0.1
LINC01996-201ENST00000573270 QRICH1Q2TAL8 776 aa15.65■□□□□ 0.1
LINC01996-201ENST00000573270 PRPF38AQ8NAV1 312 aaKnown RBP15.65■□□□□ 0.1
LINC01996-201ENST00000573270 SPRYD3Q8NCJ5 442 aa15.65■□□□□ 0.1
LINC01996-201ENST00000573270 GPKOWQ92917 476 aaPredicted RBP eCLIP15.65■□□□□ 0.1
LINC01996-201ENST00000573270 RRP36Q96EU6 259 aaKnown RBP15.65■□□□□ 0.1
LINC01996-201ENST00000573270 PAGR1Q9BTK6 254 aa15.65■□□□□ 0.1
LINC01996-201ENST00000573270 RNF26Q9BY78 433 aaPredicted RBP15.65■□□□□ 0.1
LINC01996-201ENST00000573270 SEC63Q9UGP8 760 aaKnown RBP15.65■□□□□ 0.1
LINC01996-201ENST00000573270 VWA5AO00534 786 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms