RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 ANGEL1Q9UNK9 670 aaKnown RBP10.39□□□□□ -0.75
USP6-204ENST00000572949 THRAP3Q9Y2W1 955 aaKnown RBP10.39□□□□□ -0.75
USP6-204ENST00000572949 KDRP35968 1356 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 PTPN23Q9H3S7 1636 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 HGSO14964 777 aaPredicted RBP10.39□□□□□ -0.75
USP6-204ENST00000572949 PSMD2Q13200 908 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 SLC12A1Q13621 1099 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 P3H4Q92791 437 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 SLAIN2Q9P270 581 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 ARHGEF10O15013 1369 aa10.39□□□□□ -0.75
USP6-204ENST00000572949 INO80B-WBP1J3KQ70 363 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 POLA2Q14181 598 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 ABCB5Q2M3G0 1257 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 MMEL1Q495T6 779 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 EXOC4Q96A65 974 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 INO80BQ9C086 356 aaPredicted RBP10.38□□□□□ -0.75
USP6-204ENST00000572949 C14orf93Q9H972 538 aaKnown RBP10.38□□□□□ -0.75
USP6-204ENST00000572949 KDM5BQ9UGL1 1544 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 CLRN2A0PK11 232 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 GPAA1O43292 621 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 GARSP41250 739 aaKnown RBP10.38□□□□□ -0.75
USP6-204ENST00000572949 RUFY3Q7L099 469 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 DDX27Q96GQ7 796 aaKnown RBP10.38□□□□□ -0.75
USP6-204ENST00000572949 RIC8AQ9NPQ8 531 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 EYA2O00167 538 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 GIGYF1O75420 1035 aaPredicted RBP10.38□□□□□ -0.75
USP6-204ENST00000572949 ICA1Q05084 483 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 MTHFSDQ2M296 383 aaKnown RBP10.38□□□□□ -0.75
USP6-204ENST00000572949 NUDT18Q6ZVK8 323 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 GOLGA5Q8TBA6 731 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 IP6K1Q92551 441 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 SYNRGQ9UMZ2 1314 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 FAM170AA1A519 330 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 MYL3P08590 195 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 CIITAP33076 1130 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 PAK1Q13153 545 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 FAM196AQ6ZSG2 479 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 PEX26Q7Z412 305 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 CACTINQ8WUQ7 758 aaKnown RBP10.38□□□□□ -0.75
USP6-204ENST00000572949 ZNF594Q96JF6 807 aaPredicted RBP10.38□□□□□ -0.75
USP6-204ENST00000572949 PCDHA1Q9Y5I3 950 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 SMCO2A6NFE2 343 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 GNA14O95837 355 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 CTDSPL2Q05D32 466 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 PDZD8Q8NEN9 1154 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 FAM76AQ8TAV0 307 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 ATP8A2Q9NTI2 1148 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 SPECC1L-ADORA2AF8WAN1 911 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 MIS18BP1Q6P0N0 1132 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 PHLDB2Q86SQ0 1253 aa10.38□□□□□ -0.75
USP6-204ENST00000572949 ARPP21Q9UBL0 812 aaPredicted RBP10.38□□□□□ -0.75
USP6-204ENST00000572949 XRCC5P13010 732 aaKnown RBP10.37□□□□□ -0.75
USP6-204ENST00000572949 CAPN2P17655 700 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 PDE6CP51160 858 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 COG7P83436 770 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 KLHL30Q0D2K2 578 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 CYP26C1Q6V0L0 522 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 CABP7Q86V35 215 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 MICALL1Q8N3F8 863 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 ALKBH8Q96BT7 664 aaKnown RBP10.37□□□□□ -0.75
USP6-204ENST00000572949 ABCC1P33527 1531 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 PPEF1O14829 653 aaPredicted RBP10.37□□□□□ -0.75
USP6-204ENST00000572949 NNMTP40261 264 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 ERFEQ4G0M1 354 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 HP1BP3Q5SSJ5 553 aaPredicted RBP10.37□□□□□ -0.75
USP6-204ENST00000572949 ANKRD20A3Q5VUR7 823 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 SZRD1Q7Z422 152 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 LRRC43Q8N309 656 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 MCUQ8NE86 351 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 SLC38A10Q9HBR0 1119 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 DBN1Q16643 649 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 APPBP2Q92624 585 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 VPS18Q9P253 973 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 F13A1P00488 732 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 PYGLP06737 847 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 GPBP1Q86WP2 473 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 FAM178BQ8IXR5 827 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 IFT20Q8IY31 132 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 METTL22Q9BUU2 404 aaPredicted RBP10.37□□□□□ -0.75
USP6-204ENST00000572949 PCDHA12Q9UN75 941 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 KIAA0586Q9BVV6 1533 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 PCK1P35558 622 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 IGSF22Q8N9C0 903 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 FAM149B1Q96BN6 582 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 FGD4Q96M96 766 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 BAG1Q99933 345 aaPredicted RBP10.37□□□□□ -0.75
USP6-204ENST00000572949 DNMBPQ6XZF7 1577 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 CEP104O60308 925 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 PPARGP37231 505 aaPredicted RBP10.37□□□□□ -0.75
USP6-204ENST00000572949 FAM47AQ5JRC9 791 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 SFMBT2Q5VUG0 894 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 N4BP1O75113 896 aaKnown RBP10.37□□□□□ -0.75
USP6-204ENST00000572949 ZNF853P0CG23 659 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 MYSM1Q5VVJ2 828 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 DENND2CQ68D51 928 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 LRRC47Q8N1G4 583 aaKnown RBP10.37□□□□□ -0.75
USP6-204ENST00000572949 ARHGEF1Q92888 912 aaKnown RBP10.37□□□□□ -0.75
USP6-204ENST00000572949 ZNF653Q96CK0 615 aa10.37□□□□□ -0.75
USP6-204ENST00000572949 SRPK1Q96SB4 655 aaKnown RBP10.37□□□□□ -0.75
USP6-204ENST00000572949 EFCC1Q9HA90 598 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms