RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 CACNB2Q08289 660 aaPredicted RBP19.06■□□□□ 0.64
NDE1-205ENST00000572756 RCSD1Q6JBY9 416 aa19.06■□□□□ 0.64
NDE1-205ENST00000572756 SLC38A10Q9HBR0 1119 aa19.06■□□□□ 0.64
NDE1-205ENST00000572756 CTNNA3Q9UI47 895 aa19.06■□□□□ 0.64
NDE1-205ENST00000572756 FRMPD3Q5JV73 1810 aa19.05■□□□□ 0.64
NDE1-205ENST00000572756 COBLO75128 1261 aa19.05■□□□□ 0.64
NDE1-205ENST00000572756 TOP1P11387 765 aaKnown RBP19.05■□□□□ 0.64
NDE1-205ENST00000572756 MCCP23508 829 aa19.05■□□□□ 0.64
NDE1-205ENST00000572756 COPB2P35606 906 aa19.05■□□□□ 0.64
NDE1-205ENST00000572756 SLC1A4P43007 532 aa19.05■□□□□ 0.64
NDE1-205ENST00000572756 IMMTQ16891 758 aaKnown RBP19.05■□□□□ 0.64
NDE1-205ENST00000572756 RASGRP2Q7LDG7 609 aa19.05■□□□□ 0.64
NDE1-205ENST00000572756 RUFY2Q8WXA3 655 aa19.05■□□□□ 0.64
NDE1-205ENST00000572756 ESR2Q92731 530 aa19.05■□□□□ 0.64
NDE1-205ENST00000572756 KIFC2Q96AC6 838 aa19.05■□□□□ 0.64
NDE1-205ENST00000572756 TMEM47Q9BQJ4 181 aa19.05■□□□□ 0.64
NDE1-205ENST00000572756 TEX13BQ9BXU2 312 aa19.05■□□□□ 0.64
NDE1-205ENST00000572756 TMEM232C9JQI7 657 aa19.04■□□□□ 0.64
NDE1-205ENST00000572756 SGSM2O43147 1006 aa19.04■□□□□ 0.64
NDE1-205ENST00000572756 FCER1AP12319 257 aa19.04■□□□□ 0.64
NDE1-205ENST00000572756 STAT2P52630 851 aa19.04■□□□□ 0.64
NDE1-205ENST00000572756 FAM160B2Q86V87 743 aa19.04■□□□□ 0.64
NDE1-205ENST00000572756 TTC14Q96N46 770 aa19.04■□□□□ 0.64
NDE1-205ENST00000572756 RIPK3Q9Y572 518 aa19.04■□□□□ 0.64
NDE1-205ENST00000572756 ZBED4O75132 1171 aa19.03■□□□□ 0.64
NDE1-205ENST00000572756 FDX1P10109 184 aa19.03■□□□□ 0.64
NDE1-205ENST00000572756 OAZ1P54368 228 aa19.03■□□□□ 0.64
NDE1-205ENST00000572756 PTH1RQ03431 593 aa19.03■□□□□ 0.64
NDE1-205ENST00000572756 MFSD14CQ5VZR4 134 aa19.03■□□□□ 0.64
NDE1-205ENST00000572756 OLFML2BQ68BL8 750 aa19.03■□□□□ 0.64
NDE1-205ENST00000572756 SNRNP48Q6IEG0 339 aaKnown RBP19.03■□□□□ 0.64
NDE1-205ENST00000572756 KCTD1Q719H9 257 aa19.03■□□□□ 0.64
NDE1-205ENST00000572756 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.03■□□□□ 0.64
NDE1-205ENST00000572756 DPP9Q86TI2 863 aa19.03■□□□□ 0.64
NDE1-205ENST00000572756 SKAP1Q86WV1 359 aa19.03■□□□□ 0.64
NDE1-205ENST00000572756 CHURC1Q8WUH1 139 aa19.03■□□□□ 0.64
NDE1-205ENST00000572756 DCAF4Q8WV16 495 aa19.03■□□□□ 0.64
NDE1-205ENST00000572756 SMCHD1A6NHR9 2005 aa19.02■□□□□ 0.64
NDE1-205ENST00000572756 TFRCP02786 760 aaKnown RBP19.02■□□□□ 0.64
NDE1-205ENST00000572756 CCND3P30281 292 aaPredicted RBP19.02■□□□□ 0.64
NDE1-205ENST00000572756 CHMP4CQ96CF2 233 aa19.02■□□□□ 0.64
NDE1-205ENST00000572756 MMP19Q99542 508 aa19.02■□□□□ 0.64
NDE1-205ENST00000572756 RAVER2Q9HCJ3 691 aaKnown RBP19.02■□□□□ 0.64
NDE1-205ENST00000572756 B4E1Z4 1266 aa19.01■□□□□ 0.63
NDE1-205ENST00000572756 KDM4AO75164 1064 aa19.01■□□□□ 0.63
NDE1-205ENST00000572756 FARP2O94887 1054 aaPredicted RBP19.01■□□□□ 0.63
NDE1-205ENST00000572756 DGKHQ86XP1 1220 aa19.01■□□□□ 0.63
NDE1-205ENST00000572756 CPXCR1Q8N123 301 aa19.01■□□□□ 0.63
NDE1-205ENST00000572756 MAML3Q96JK9 1138 aa19.01■□□□□ 0.63
NDE1-205ENST00000572756 SLC5A4Q9NY91 659 aa19.01■□□□□ 0.63
NDE1-205ENST00000572756 OGDHLQ9ULD0 1010 aa19.01■□□□□ 0.63
NDE1-205ENST00000572756 ZNF536O15090 1300 aa19■□□□□ 0.63
NDE1-205ENST00000572756 SNHG28P0DPA3 235 aa19■□□□□ 0.63
NDE1-205ENST00000572756 PDHBP11177 359 aa19■□□□□ 0.63
NDE1-205ENST00000572756 CYP2C19P33261 490 aa19■□□□□ 0.63
NDE1-205ENST00000572756 KCTD2Q14681 263 aa19■□□□□ 0.63
NDE1-205ENST00000572756 ZNF792Q3KQV3 632 aa19■□□□□ 0.63
NDE1-205ENST00000572756 PRPF38BQ5VTL8 546 aaKnown RBP19■□□□□ 0.63
NDE1-205ENST00000572756 LHX8Q68G74 356 aa19■□□□□ 0.63
NDE1-205ENST00000572756 BTNL9Q6UXG8 535 aa19■□□□□ 0.63
NDE1-205ENST00000572756 TRPV1Q8NER1 839 aa19■□□□□ 0.63
NDE1-205ENST00000572756 ANKS1AQ92625 1134 aa19■□□□□ 0.63
NDE1-205ENST00000572756 ZKSCAN3Q9BRR0 538 aa19■□□□□ 0.63
NDE1-205ENST00000572756 CNNM2Q9H8M5 875 aa19■□□□□ 0.63
NDE1-205ENST00000572756 ZSWIM5Q9P217 1185 aa19■□□□□ 0.63
NDE1-205ENST00000572756 PRR12Q9ULL5 1215 aa19■□□□□ 0.63
NDE1-205ENST00000572756 ISY1Q9ULR0 285 aaKnown RBP19■□□□□ 0.63
NDE1-205ENST00000572756 MTMR7Q9Y216 660 aa19■□□□□ 0.63
NDE1-205ENST00000572756 DIS3Q9Y2L1 958 aaKnown RBP19■□□□□ 0.63
NDE1-205ENST00000572756 PGK2P07205 417 aa18.99■□□□□ 0.63
NDE1-205ENST00000572756 CYP21A2P08686 494 aa18.99■□□□□ 0.63
NDE1-205ENST00000572756 CYBAP13498 195 aa18.99■□□□□ 0.63
NDE1-205ENST00000572756 MNX1P50219 401 aaPredicted RBP18.99■□□□□ 0.63
NDE1-205ENST00000572756 IKQ13123 557 aaPredicted RBP18.99■□□□□ 0.63
NDE1-205ENST00000572756 CCDC96Q2M329 555 aa18.99■□□□□ 0.63
NDE1-205ENST00000572756 BMP2KLQ5H9B9 411 aa18.99■□□□□ 0.63
NDE1-205ENST00000572756 IQCA1Q86XH1 822 aa18.99■□□□□ 0.63
NDE1-205ENST00000572756 ANKLE1Q8NAG6 615 aa18.99■□□□□ 0.63
NDE1-205ENST00000572756 KRT23Q9C075 422 aa18.99■□□□□ 0.63
NDE1-205ENST00000572756 CTDP1Q9Y5B0 961 aaPredicted RBP18.99■□□□□ 0.63
NDE1-205ENST00000572756 U3KPZ7 1027 aaPredicted RBP18.99■□□□□ 0.63
NDE1-205ENST00000572756 ALPK3Q96L96 1907 aa18.99■□□□□ 0.63
NDE1-205ENST00000572756 CEP290O15078 2479 aa18.98■□□□□ 0.63
NDE1-205ENST00000572756 DNAJC25-GNG10A0A024R161 153 aa18.98■□□□□ 0.63
NDE1-205ENST00000572756 ZNF543Q08ER8 600 aa18.98■□□□□ 0.63
NDE1-205ENST00000572756 CCDC178Q5BJE1 867 aa18.98■□□□□ 0.63
NDE1-205ENST00000572756 TTBK2Q6IQ55 1244 aa18.98■□□□□ 0.63
NDE1-205ENST00000572756 ENAHQ8N8S7 591 aaPredicted RBP18.98■□□□□ 0.63
NDE1-205ENST00000572756 CHST13Q8NET6 341 aa18.98■□□□□ 0.63
NDE1-205ENST00000572756 MAP4K1Q92918 833 aa18.98■□□□□ 0.63
NDE1-205ENST00000572756 ZSCAN10Q96SZ4 725 aaPredicted RBP18.98■□□□□ 0.63
NDE1-205ENST00000572756 DIS3LQ8TF46 1054 aaKnown RBP18.97■□□□□ 0.63
NDE1-205ENST00000572756 CCDC136Q96JN2 1154 aa18.97■□□□□ 0.63
NDE1-205ENST00000572756 AGBL1Q96MI9 1066 aa18.97■□□□□ 0.63
NDE1-205ENST00000572756 RANBP17Q9H2T7 1088 aaKnown RBP18.97■□□□□ 0.63
NDE1-205ENST00000572756 FBXO40Q9UH90 709 aa18.97■□□□□ 0.63
NDE1-205ENST00000572756 TAF6LQ9Y6J9 622 aa18.97■□□□□ 0.63
NDE1-205ENST00000572756 MCM3APO60318 1980 aa18.97■□□□□ 0.63
NDE1-205ENST00000572756 TNKSO95271 1327 aa18.97■□□□□ 0.63
NDE1-205ENST00000572756 FRMPD2Q68DX3 1309 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms