RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 TMEM39BQ9GZU3 492 aa22.24■■□□□ 1.15
RPAIN-210ENST00000571613 GOLPH3LQ9H4A5 285 aa22.24■■□□□ 1.15
RPAIN-210ENST00000571613 PCDHB6Q9Y5E3 794 aa22.24■■□□□ 1.15
RPAIN-210ENST00000571613 SRPRBQ9Y5M8 271 aaKnown RBP22.24■■□□□ 1.15
RPAIN-210ENST00000571613 SLURP2P0DP57 97 aa22.23■■□□□ 1.15
RPAIN-210ENST00000571613 TIGD1Q96MW7 591 aa22.23■■□□□ 1.15
RPAIN-210ENST00000571613 FHDC1Q9C0D6 1143 aaPredicted RBP22.23■■□□□ 1.15
RPAIN-210ENST00000571613 SH2D4AQ9H788 454 aa22.23■■□□□ 1.15
RPAIN-210ENST00000571613 PGAP2Q9UHJ9 254 aa22.23■■□□□ 1.15
RPAIN-210ENST00000571613 F5H6K3 240 aa22.23■■□□□ 1.15
RPAIN-210ENST00000571613 M0R2N6 131 aa22.23■■□□□ 1.15
RPAIN-210ENST00000571613 PRELPP51888 382 aa22.23■■□□□ 1.15
RPAIN-210ENST00000571613 KLRC3Q07444 240 aa22.23■■□□□ 1.15
RPAIN-210ENST00000571613 RASA3Q14644 834 aa22.23■■□□□ 1.15
RPAIN-210ENST00000571613 PIK3AP1Q6ZUJ8 805 aa22.23■■□□□ 1.15
RPAIN-210ENST00000571613 KRT25Q7Z3Z0 450 aa22.23■■□□□ 1.15
RPAIN-210ENST00000571613 SIAH1Q8IUQ4 282 aa22.23■■□□□ 1.15
RPAIN-210ENST00000571613 ADGRF4Q8IZF3 695 aa22.23■■□□□ 1.15
RPAIN-210ENST00000571613 FERMT2Q96AC1 680 aa22.23■■□□□ 1.15
RPAIN-210ENST00000571613 HOOK2Q96ED9 719 aa22.23■■□□□ 1.15
RPAIN-210ENST00000571613 MTMR8Q96EF0 704 aa22.23■■□□□ 1.15
RPAIN-210ENST00000571613 GLT8D2Q9H1C3 349 aa22.23■■□□□ 1.15
RPAIN-210ENST00000571613 FAM13BQ9NYF5 915 aa22.23■■□□□ 1.15
RPAIN-210ENST00000571613 A0A1B0GVL5 298 aa22.22■■□□□ 1.15
RPAIN-210ENST00000571613 SMCO2A6NFE2 343 aa22.22■■□□□ 1.15
RPAIN-210ENST00000571613 CAMK4Q16566 473 aa22.22■■□□□ 1.15
RPAIN-210ENST00000571613 KIF4BQ2VIQ3 1234 aa22.22■■□□□ 1.15
RPAIN-210ENST00000571613 RESP18Q5W5W9 173 aa22.22■■□□□ 1.15
RPAIN-210ENST00000571613 RASGRP2Q7LDG7 609 aa22.22■■□□□ 1.15
RPAIN-210ENST00000571613 GPC2Q8N158 579 aa22.22■■□□□ 1.15
RPAIN-210ENST00000571613 FUCA2Q9BTY2 467 aa22.22■■□□□ 1.15
RPAIN-210ENST00000571613 RBSNQ9H1K0 784 aa22.22■■□□□ 1.15
RPAIN-210ENST00000571613 JMJD4Q9H9V9 463 aa22.22■■□□□ 1.15
RPAIN-210ENST00000571613 ZBTB21Q9ULJ3 1066 aa22.22■■□□□ 1.15
RPAIN-210ENST00000571613 ZBTB5O15062 677 aa22.21■■□□□ 1.15
RPAIN-210ENST00000571613 CAVIN2O95810 425 aa22.21■■□□□ 1.15
RPAIN-210ENST00000571613 ASNSP08243 561 aa22.21■■□□□ 1.15
RPAIN-210ENST00000571613 ATP2B1P20020 1258 aa22.21■■□□□ 1.15
RPAIN-210ENST00000571613 NDUFA8P51970 172 aa22.21■■□□□ 1.15
RPAIN-210ENST00000571613 TYW1BQ6NUM6 668 aa22.21■■□□□ 1.15
RPAIN-210ENST00000571613 SASS6Q6UVJ0 657 aa22.21■■□□□ 1.15
RPAIN-210ENST00000571613 CPVLQ9H3G5 476 aa22.21■■□□□ 1.15
RPAIN-210ENST00000571613 GOPCQ9HD26 462 aa22.21■■□□□ 1.15
RPAIN-210ENST00000571613 PFKFB1P16118 471 aa22.2■■□□□ 1.15
RPAIN-210ENST00000571613 CAP2P40123 477 aa22.2■■□□□ 1.15
RPAIN-210ENST00000571613 SYKP43405 635 aa22.2■■□□□ 1.15
RPAIN-210ENST00000571613 UVSSAQ2YD98 709 aa22.2■■□□□ 1.15
RPAIN-210ENST00000571613 EARS2Q5JPH6 523 aaKnown RBP22.2■■□□□ 1.15
RPAIN-210ENST00000571613 KCTD1Q719H9 257 aa22.2■■□□□ 1.15
RPAIN-210ENST00000571613 SDF4Q9BRK5 362 aa22.2■■□□□ 1.15
RPAIN-210ENST00000571613 FBXO2Q9UK22 296 aaPredicted RBP22.2■■□□□ 1.15
RPAIN-210ENST00000571613 PCDHA6Q9UN73 950 aa22.2■■□□□ 1.15
RPAIN-210ENST00000571613 HPSEQ9Y251 543 aa22.2■■□□□ 1.15
RPAIN-210ENST00000571613 TMX2Q9Y320 296 aa22.2■■□□□ 1.15
RPAIN-210ENST00000571613 PCDHA8Q9Y5H6 950 aa22.2■■□□□ 1.15
RPAIN-210ENST00000571613 ZNF202O95125 648 aa22.2■■□□□ 1.14
RPAIN-210ENST00000571613 SHC4Q6S5L8 630 aa22.2■■□□□ 1.14
RPAIN-210ENST00000571613 APOBEC3FQ8IUX4 373 aaKnown RBP22.2■■□□□ 1.14
RPAIN-210ENST00000571613 ZNF541Q9H0D2 1346 aa22.19■■□□□ 1.14
RPAIN-210ENST00000571613 SHTN1A0MZ66 631 aa22.19■■□□□ 1.14
RPAIN-210ENST00000571613 RAD21O60216 631 aa22.19■■□□□ 1.14
RPAIN-210ENST00000571613 NDUFB10O96000 172 aa22.19■■□□□ 1.14
RPAIN-210ENST00000571613 BMP3P12645 472 aa22.19■■□□□ 1.14
RPAIN-210ENST00000571613 TRAF1Q13077 416 aa22.19■■□□□ 1.14
RPAIN-210ENST00000571613 ORC2Q13416 577 aaPredicted RBP22.19■■□□□ 1.14
RPAIN-210ENST00000571613 RRP1BQ14684 758 aaKnown RBP22.19■■□□□ 1.14
RPAIN-210ENST00000571613 TBC1D10BQ4KMP7 808 aaPredicted RBP22.19■■□□□ 1.14
RPAIN-210ENST00000571613 SAMD7Q7Z3H4 446 aa22.19■■□□□ 1.14
RPAIN-210ENST00000571613 FAM205CA6NFA0 338 aa22.18■■□□□ 1.14
RPAIN-210ENST00000571613 ATP2C1P98194 919 aaPredicted RBP22.18■■□□□ 1.14
RPAIN-210ENST00000571613 ARL6IP4Q66PJ3 421 aaKnown RBP22.18■■□□□ 1.14
RPAIN-210ENST00000571613 TTBK2Q6IQ55 1244 aa22.18■■□□□ 1.14
RPAIN-210ENST00000571613 BTNL9Q6UXG8 535 aa22.18■■□□□ 1.14
RPAIN-210ENST00000571613 ELOA2Q8IYF1 753 aaPredicted RBP22.18■■□□□ 1.14
RPAIN-210ENST00000571613 CCDC34Q96HJ3 373 aa22.18■■□□□ 1.14
RPAIN-210ENST00000571613 HACL1Q9UJ83 578 aa22.18■■□□□ 1.14
RPAIN-210ENST00000571613 LAD1O00515 517 aa22.17■■□□□ 1.14
RPAIN-210ENST00000571613 ADCY7P51828 1080 aa22.17■■□□□ 1.14
RPAIN-210ENST00000571613 TYRO3Q06418 890 aa22.17■■□□□ 1.14
RPAIN-210ENST00000571613 NONOQ15233 471 aaKnown RBP eCLIP22.17■■□□□ 1.14
RPAIN-210ENST00000571613 SHROOM1Q2M3G4 852 aaPredicted RBP22.17■■□□□ 1.14
RPAIN-210ENST00000571613 DCAF15Q66K64 600 aa22.17■■□□□ 1.14
RPAIN-210ENST00000571613 REXO1Q8N1G1 1221 aaKnown RBP22.17■■□□□ 1.14
RPAIN-210ENST00000571613 GPRC5DQ9NZD1 345 aa22.17■■□□□ 1.14
RPAIN-210ENST00000571613 HOOK1Q9UJC3 728 aaKnown RBP22.17■■□□□ 1.14
RPAIN-210ENST00000571613 MRPL12P52815 198 aaKnown RBP22.17■■□□□ 1.14
RPAIN-210ENST00000571613 JAG1P78504 1218 aa22.17■■□□□ 1.14
RPAIN-210ENST00000571613 ZNF174Q15697 407 aa22.17■■□□□ 1.14
RPAIN-210ENST00000571613 MIGA2Q7L4E1 593 aa22.17■■□□□ 1.14
RPAIN-210ENST00000571613 TEX2Q8IWB9 1127 aa22.17■■□□□ 1.14
RPAIN-210ENST00000571613 CKAP2LQ8IYA6 745 aa22.17■■□□□ 1.14
RPAIN-210ENST00000571613 TEPSINQ96N21 525 aa22.17■■□□□ 1.14
RPAIN-210ENST00000571613 CLIC6Q96NY7 704 aa22.17■■□□□ 1.14
RPAIN-210ENST00000571613 SYT17Q9BSW7 474 aa22.17■■□□□ 1.14
RPAIN-210ENST00000571613 KCNH3Q9ULD8 1083 aa22.17■■□□□ 1.14
RPAIN-210ENST00000571613 PPP2R3BQ9Y5P8 575 aa22.17■■□□□ 1.14
RPAIN-210ENST00000571613 DICER1Q9UPY3 1922 aaKnown RBP22.16■■□□□ 1.14
RPAIN-210ENST00000571613 USP17L10C9JJH3 530 aa22.16■■□□□ 1.14
RPAIN-210ENST00000571613 MCTP2Q6DN12 878 aa22.16■■□□□ 1.14
RPAIN-210ENST00000571613 PYM1Q9BRP8 204 aaKnown RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms