RNA–Protein interactions for RNA: ENST00000570845.5

ATP2A3-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, human

TSL 1 (best)

Gene ATP2A3, Length 604 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2A3-208	ENST00000570845	RPS6KB1	P23443	525 aa		13.52	□□□□□ -0.25
ATP2A3-208	ENST00000570845	LIFR	P42702	1097 aa		13.52	□□□□□ -0.25
ATP2A3-208	ENST00000570845	FGD1	P98174	961 aa		13.52	□□□□□ -0.25
ATP2A3-208	ENST00000570845	PLS1	Q14651	629 aa		13.52	□□□□□ -0.25
ATP2A3-208	ENST00000570845	GPATCH4	Q5T3I0	446 aa	Known RBP	13.52	□□□□□ -0.25
ATP2A3-208	ENST00000570845	TTBK2	Q6IQ55	1244 aa		13.52	□□□□□ -0.25
ATP2A3-208	ENST00000570845	CATIP	Q7Z7H3	387 aa		13.52	□□□□□ -0.25
ATP2A3-208	ENST00000570845	TMTC2	Q8N394	836 aa		13.52	□□□□□ -0.25
ATP2A3-208	ENST00000570845	MB21D1	Q8N884	522 aa		13.52	□□□□□ -0.25
ATP2A3-208	ENST00000570845	ADAMTS5	Q9UNA0	930 aa		13.52	□□□□□ -0.25
ATP2A3-208	ENST00000570845	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.52	□□□□□ -0.25
ATP2A3-208	ENST00000570845	PLA2G6	O60733	806 aa		13.51	□□□□□ -0.25
ATP2A3-208	ENST00000570845	ZBED4	O75132	1171 aa		13.51	□□□□□ -0.25
ATP2A3-208	ENST00000570845	PARP1	P09874	1014 aa	Known RBP	13.51	□□□□□ -0.25
ATP2A3-208	ENST00000570845	SLC16A2	P36021	539 aa		13.51	□□□□□ -0.25
ATP2A3-208	ENST00000570845	PSMC4	P43686	418 aa		13.51	□□□□□ -0.25
ATP2A3-208	ENST00000570845	ANAPC15	P60006	121 aa		13.51	□□□□□ -0.25
ATP2A3-208	ENST00000570845	CAP1	Q01518	475 aa		13.51	□□□□□ -0.25
ATP2A3-208	ENST00000570845		Q3C1V9	767 aa		13.51	□□□□□ -0.25
ATP2A3-208	ENST00000570845	ASPRV1	Q53RT3	343 aa		13.51	□□□□□ -0.25
ATP2A3-208	ENST00000570845		Q6ZUG5	572 aa		13.51	□□□□□ -0.25
ATP2A3-208	ENST00000570845	RUFY3	Q7L099	469 aa		13.51	□□□□□ -0.25
ATP2A3-208	ENST00000570845	ZNF654	Q8IZM8	581 aa		13.51	□□□□□ -0.25
ATP2A3-208	ENST00000570845	TM6SF1	Q9BZW5	370 aa		13.51	□□□□□ -0.25
ATP2A3-208	ENST00000570845	ZSWIM6	Q9HCJ5	1215 aa		13.51	□□□□□ -0.25
ATP2A3-208	ENST00000570845	PRR12	Q9ULL5	1215 aa		13.51	□□□□□ -0.25
ATP2A3-208	ENST00000570845	CYP46A1	Q9Y6A2	500 aa		13.51	□□□□□ -0.25
ATP2A3-208	ENST00000570845	MYH7B	A7E2Y1	1941 aa		13.51	□□□□□ -0.25
ATP2A3-208	ENST00000570845	DDAH1	O94760	285 aa		13.5	□□□□□ -0.25
ATP2A3-208	ENST00000570845	FMNL1	O95466	1100 aa	Predicted RBP	13.5	□□□□□ -0.25
ATP2A3-208	ENST00000570845	CTGF	P29279	349 aa		13.5	□□□□□ -0.25
ATP2A3-208	ENST00000570845	FCGRT	P55899	365 aa		13.5	□□□□□ -0.25
ATP2A3-208	ENST00000570845	CCNA1	P78396	465 aa		13.5	□□□□□ -0.25
ATP2A3-208	ENST00000570845	GRM4	Q14833	912 aa		13.5	□□□□□ -0.25
ATP2A3-208	ENST00000570845	TMEM132B	Q14DG7	1078 aa		13.5	□□□□□ -0.25
ATP2A3-208	ENST00000570845	ARHGEF6	Q15052	776 aa		13.5	□□□□□ -0.25
ATP2A3-208	ENST00000570845	SYDE2	Q5VT97	1194 aa		13.5	□□□□□ -0.25
ATP2A3-208	ENST00000570845	BTNL9	Q6UXG8	535 aa		13.5	□□□□□ -0.25
ATP2A3-208	ENST00000570845	CCAR1	Q8IX12	1150 aa	Known RBP	13.5	□□□□□ -0.25
ATP2A3-208	ENST00000570845	REPS2	Q8NFH8	660 aa		13.5	□□□□□ -0.25
ATP2A3-208	ENST00000570845	NUP133	Q8WUM0	1156 aa		13.5	□□□□□ -0.25
ATP2A3-208	ENST00000570845	TRIM47	Q96LD4	638 aa		13.5	□□□□□ -0.25
ATP2A3-208	ENST00000570845	MYL10	Q9BUA6	226 aa		13.5	□□□□□ -0.25
ATP2A3-208	ENST00000570845	UPF3B	Q9BZI7	483 aa	Known RBP	13.5	□□□□□ -0.25
ATP2A3-208	ENST00000570845	SPATC1L	Q9H0A9	340 aa		13.5	□□□□□ -0.25
ATP2A3-208	ENST00000570845	SLC38A10	Q9HBR0	1119 aa		13.5	□□□□□ -0.25
ATP2A3-208	ENST00000570845	SLC12A7	Q9Y666	1083 aa		13.5	□□□□□ -0.25
ATP2A3-208	ENST00000570845	TNPO2	O14787	897 aa	Known RBP	13.49	□□□□□ -0.25
ATP2A3-208	ENST00000570845	CALM1	P0DP23	149 aa		13.49	□□□□□ -0.25
ATP2A3-208	ENST00000570845	CALM2	P0DP24	149 aa		13.49	□□□□□ -0.25
ATP2A3-208	ENST00000570845	CALM3	P0DP25	149 aa		13.49	□□□□□ -0.25
ATP2A3-208	ENST00000570845	FDX1	P10109	184 aa		13.49	□□□□□ -0.25
ATP2A3-208	ENST00000570845	MAPK4	P31152	587 aa		13.49	□□□□□ -0.25
ATP2A3-208	ENST00000570845	SNAP25	P60880	206 aa		13.49	□□□□□ -0.25
ATP2A3-208	ENST00000570845	TROAP	Q12815	778 aa		13.49	□□□□□ -0.25
ATP2A3-208	ENST00000570845	WDR78	Q5VTH9	848 aa		13.49	□□□□□ -0.25
ATP2A3-208	ENST00000570845	OTOP1	Q7RTM1	612 aa		13.49	□□□□□ -0.25
ATP2A3-208	ENST00000570845	CTU1	Q7Z7A3	348 aa	Known RBP	13.49	□□□□□ -0.25
ATP2A3-208	ENST00000570845	SGMS1	Q86VZ5	419 aa		13.49	□□□□□ -0.25
ATP2A3-208	ENST00000570845	RAB11FIP4	Q86YS3	637 aa		13.49	□□□□□ -0.25
ATP2A3-208	ENST00000570845	CPXCR1	Q8N123	301 aa		13.49	□□□□□ -0.25
ATP2A3-208	ENST00000570845	STAG2	Q8N3U4	1231 aa		13.49	□□□□□ -0.25
ATP2A3-208	ENST00000570845	BRF1	Q92994	677 aa		13.49	□□□□□ -0.25
ATP2A3-208	ENST00000570845	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.49	□□□□□ -0.25
ATP2A3-208	ENST00000570845	UBA5	Q9GZZ9	404 aa		13.49	□□□□□ -0.25
ATP2A3-208	ENST00000570845	PORCN	Q9H237	461 aa		13.49	□□□□□ -0.25
ATP2A3-208	ENST00000570845	CPVL	Q9H3G5	476 aa		13.49	□□□□□ -0.25
ATP2A3-208	ENST00000570845	EFCC1	Q9HA90	598 aa		13.49	□□□□□ -0.25
ATP2A3-208	ENST00000570845	UPF2	Q9HAU5	1272 aa	Known RBP	13.49	□□□□□ -0.25
ATP2A3-208	ENST00000570845	CWC22	Q9HCG8	908 aa	Known RBP	13.49	□□□□□ -0.25
ATP2A3-208	ENST00000570845	MAD2L2	Q9UI95	211 aa		13.49	□□□□□ -0.25
ATP2A3-208	ENST00000570845	ZNF214	Q9UL59	606 aa	Predicted RBP	13.49	□□□□□ -0.25
ATP2A3-208	ENST00000570845	TRIM17	Q9Y577	477 aa		13.49	□□□□□ -0.25
ATP2A3-208	ENST00000570845	LRRC37A2	A6NM11	1700 aa		13.49	□□□□□ -0.25
ATP2A3-208	ENST00000570845	KLF18	A0A0U1RQI7	1052 aa		13.48	□□□□□ -0.25
ATP2A3-208	ENST00000570845	PALM3	A6NDB9	673 aa	Predicted RBP	13.48	□□□□□ -0.25
ATP2A3-208	ENST00000570845	KLRF2	D3W0D1	207 aa		13.48	□□□□□ -0.25
ATP2A3-208	ENST00000570845	DHX16	O60231	1041 aa	Known RBP	13.48	□□□□□ -0.25
ATP2A3-208	ENST00000570845	GNRH1	P01148	92 aa		13.48	□□□□□ -0.25
ATP2A3-208	ENST00000570845	RXRA	P19793	462 aa		13.48	□□□□□ -0.25
ATP2A3-208	ENST00000570845	STAT3	P40763	770 aa		13.48	□□□□□ -0.25
ATP2A3-208	ENST00000570845	SLC4A3	P48751	1232 aa		13.48	□□□□□ -0.25
ATP2A3-208	ENST00000570845	APOBR	Q0VD83	1088 aa		13.48	□□□□□ -0.25
ATP2A3-208	ENST00000570845	SNRNP48	Q6IEG0	339 aa	Known RBP	13.48	□□□□□ -0.25
ATP2A3-208	ENST00000570845	CCDC174	Q6PII3	467 aa		13.48	□□□□□ -0.25
ATP2A3-208	ENST00000570845	APOA5	Q6Q788	366 aa		13.48	□□□□□ -0.25
ATP2A3-208	ENST00000570845	SYNE3	Q6ZMZ3	975 aa		13.48	□□□□□ -0.25
ATP2A3-208	ENST00000570845	MICU3	Q86XE3	530 aa		13.48	□□□□□ -0.25
ATP2A3-208	ENST00000570845	CCDC144CP	Q8IYA2	1237 aa		13.48	□□□□□ -0.25
ATP2A3-208	ENST00000570845	CTCFL	Q8NI51	663 aa	Predicted RBP	13.48	□□□□□ -0.25
ATP2A3-208	ENST00000570845	COA7	Q96BR5	231 aa		13.48	□□□□□ -0.25
ATP2A3-208	ENST00000570845	MAP3K14	Q99558	947 aa		13.48	□□□□□ -0.25
ATP2A3-208	ENST00000570845	C22orf23	Q9BZE7	217 aa		13.48	□□□□□ -0.25
ATP2A3-208	ENST00000570845	RAVER2	Q9HCJ3	691 aa	Known RBP	13.48	□□□□□ -0.25
ATP2A3-208	ENST00000570845	BRPF3	Q9ULD4	1205 aa		13.48	□□□□□ -0.25
ATP2A3-208	ENST00000570845	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.48	□□□□□ -0.25
ATP2A3-208	ENST00000570845	ZBTB43	O43298	467 aa		13.47	□□□□□ -0.25
ATP2A3-208	ENST00000570845	KIF5B	P33176	963 aa		13.47	□□□□□ -0.25
ATP2A3-208	ENST00000570845	OAZ1	P54368	228 aa		13.47	□□□□□ -0.25
ATP2A3-208	ENST00000570845	GPR142	Q7Z601	462 aa		13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms