RNA–Protein interactions for RNA: ENST00000570749.5

TRIM25-204, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-204ENST00000570749 BMP3P12645 472 aa11.49□□□□□ -0.57
TRIM25-204ENST00000570749 CYP2C19P33261 490 aa11.49□□□□□ -0.57
TRIM25-204ENST00000570749 STAT2P52630 851 aa11.49□□□□□ -0.57
TRIM25-204ENST00000570749 TFAP4Q01664 338 aa11.49□□□□□ -0.57
TRIM25-204ENST00000570749 SNRNP48Q6IEG0 339 aaKnown RBP11.49□□□□□ -0.57
TRIM25-204ENST00000570749 RCSD1Q6JBY9 416 aa11.49□□□□□ -0.57
TRIM25-204ENST00000570749 ZNF467Q7Z7K2 595 aaPredicted RBP11.49□□□□□ -0.57
TRIM25-204ENST00000570749 CHST13Q8NET6 341 aa11.49□□□□□ -0.57
TRIM25-204ENST00000570749 SLC38A10Q9HBR0 1119 aa11.49□□□□□ -0.57
TRIM25-204ENST00000570749 FBXO28Q9NVF7 368 aa11.49□□□□□ -0.57
TRIM25-204ENST00000570749 PNMA2Q9UL42 364 aa11.49□□□□□ -0.57
TRIM25-204ENST00000570749 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.49□□□□□ -0.57
TRIM25-204ENST00000570749 PFASO15067 1338 aa11.49□□□□□ -0.57
TRIM25-204ENST00000570749 SYNGAP1Q96PV0 1343 aa11.49□□□□□ -0.57
TRIM25-204ENST00000570749 COBLO75128 1261 aa11.48□□□□□ -0.57
TRIM25-204ENST00000570749 PRDM1O75626 825 aa11.48□□□□□ -0.57
TRIM25-204ENST00000570749 FGRP09769 529 aa11.48□□□□□ -0.57
TRIM25-204ENST00000570749 TKFCQ3LXA3 575 aa11.48□□□□□ -0.57
TRIM25-204ENST00000570749 SLFN13Q68D06 897 aa11.48□□□□□ -0.57
TRIM25-204ENST00000570749 SAMD1Q6SPF0 538 aaPredicted RBP11.48□□□□□ -0.57
TRIM25-204ENST00000570749 CHD1LQ86WJ1 897 aa11.48□□□□□ -0.57
TRIM25-204ENST00000570749 C7orf61Q8IZ16 206 aa11.48□□□□□ -0.57
TRIM25-204ENST00000570749 TINF2Q9BSI4 451 aa11.48□□□□□ -0.57
TRIM25-204ENST00000570749 RBM27Q9P2N5 1060 aaKnown RBP11.48□□□□□ -0.57
TRIM25-204ENST00000570749 CNPY2Q9Y2B0 182 aa11.48□□□□□ -0.57
TRIM25-204ENST00000570749 CCDC171Q6TFL3 1326 aa11.47□□□□□ -0.57
TRIM25-204ENST00000570749 TRIM6-TRIM34B2RNG4 842 aa11.47□□□□□ -0.57
TRIM25-204ENST00000570749 RARBP10826 455 aa11.47□□□□□ -0.57
TRIM25-204ENST00000570749 AKR1A1P14550 325 aa11.47□□□□□ -0.57
TRIM25-204ENST00000570749 SLC1A4P43007 532 aa11.47□□□□□ -0.57
TRIM25-204ENST00000570749 NOVP48745 357 aa11.47□□□□□ -0.57
TRIM25-204ENST00000570749 NUCB1Q02818 461 aa11.47□□□□□ -0.57
TRIM25-204ENST00000570749 ZNF792Q3KQV3 632 aa11.47□□□□□ -0.57
TRIM25-204ENST00000570749 C1orf53Q5VUE5 145 aa11.47□□□□□ -0.57
TRIM25-204ENST00000570749 MAMDC4Q6UXC1 1216 aa11.47□□□□□ -0.57
TRIM25-204ENST00000570749 STK11IPQ8N1F8 1099 aa11.47□□□□□ -0.57
TRIM25-204ENST00000570749 STAG1Q8WVM7 1258 aa11.47□□□□□ -0.57
TRIM25-204ENST00000570749 DDX11Q96FC9 970 aa11.47□□□□□ -0.57
TRIM25-204ENST00000570749 GDF15Q99988 308 aa11.47□□□□□ -0.57
TRIM25-204ENST00000570749 LNPKQ9C0E8 428 aa11.47□□□□□ -0.57
TRIM25-204ENST00000570749 RNF41Q9H4P4 317 aaPredicted RBP11.47□□□□□ -0.57
TRIM25-204ENST00000570749 STX8Q9UNK0 236 aa11.47□□□□□ -0.57
TRIM25-204ENST00000570749 SMCHD1A6NHR9 2005 aa11.47□□□□□ -0.57
TRIM25-204ENST00000570749 RANBP6O60518 1105 aaKnown RBP11.46□□□□□ -0.57
TRIM25-204ENST00000570749 GPR153Q6NV75 609 aa11.46□□□□□ -0.57
TRIM25-204ENST00000570749 RNF180Q86T96 592 aa11.46□□□□□ -0.57
TRIM25-204ENST00000570749 LRRC47Q8N1G4 583 aaKnown RBP11.46□□□□□ -0.57
TRIM25-204ENST00000570749 DCAF4Q8WV16 495 aa11.46□□□□□ -0.57
TRIM25-204ENST00000570749 KIFC2Q96AC6 838 aa11.46□□□□□ -0.57
TRIM25-204ENST00000570749 NUP88Q99567 741 aaPredicted RBP11.46□□□□□ -0.57
TRIM25-204ENST00000570749 TCP11L1Q9NUJ3 509 aa11.46□□□□□ -0.57
TRIM25-204ENST00000570749 PRKAG2Q9UGJ0 569 aa11.46□□□□□ -0.57
TRIM25-204ENST00000570749 SZT2Q5T011 3432 aa11.45□□□□□ -0.58
TRIM25-204ENST00000570749 LAMA3Q16787 3333 aa11.45□□□□□ -0.58
TRIM25-204ENST00000570749 DNAJC25-GNG10A0A024R161 153 aa11.45□□□□□ -0.58
TRIM25-204ENST00000570749 FOXP2O15409 715 aa11.45□□□□□ -0.58
TRIM25-204ENST00000570749 FGAP02671 866 aa11.45□□□□□ -0.58
TRIM25-204ENST00000570749 HSPD1P10809 573 aaKnown RBP11.45□□□□□ -0.58
TRIM25-204ENST00000570749 IKQ13123 557 aaPredicted RBP11.45□□□□□ -0.58
TRIM25-204ENST00000570749 CCDC178Q5BJE1 867 aa11.45□□□□□ -0.58
TRIM25-204ENST00000570749 FAM47AQ5JRC9 791 aa11.45□□□□□ -0.58
TRIM25-204ENST00000570749 ANKRD35Q8N283 1001 aa11.45□□□□□ -0.58
TRIM25-204ENST00000570749 TRPV1Q8NER1 839 aa11.45□□□□□ -0.58
TRIM25-204ENST00000570749 RILPL2Q969X0 211 aa11.45□□□□□ -0.58
TRIM25-204ENST00000570749 TTC14Q96N46 770 aa11.45□□□□□ -0.58
TRIM25-204ENST00000570749 SENP6Q9GZR1 1112 aaPredicted RBP11.45□□□□□ -0.58
TRIM25-204ENST00000570749 ABHD16BQ9H3Z7 469 aa11.45□□□□□ -0.58
TRIM25-204ENST00000570749 ACAD9Q9H845 621 aa11.45□□□□□ -0.58
TRIM25-204ENST00000570749 MCM3APO60318 1980 aa11.45□□□□□ -0.58
TRIM25-204ENST00000570749 LTBP2Q14767 1821 aa11.44□□□□□ -0.58
TRIM25-204ENST00000570749 LOC102724159A0A0B4J2E5 919 aa11.44□□□□□ -0.58
TRIM25-204ENST00000570749 A0A0D9SFI3 127 aa11.44□□□□□ -0.58
TRIM25-204ENST00000570749 TMEM232C9JQI7 657 aa11.44□□□□□ -0.58
TRIM25-204ENST00000570749 PGK2P07205 417 aa11.44□□□□□ -0.58
TRIM25-204ENST00000570749 TOP1P11387 765 aaKnown RBP11.44□□□□□ -0.58
TRIM25-204ENST00000570749 CTDSPL2Q05D32 466 aa11.44□□□□□ -0.58
TRIM25-204ENST00000570749 SNX17Q15036 470 aa11.44□□□□□ -0.58
TRIM25-204ENST00000570749 PWP2Q15269 919 aaKnown RBP11.44□□□□□ -0.58
TRIM25-204ENST00000570749 LRRC26Q2I0M4 334 aa11.44□□□□□ -0.58
TRIM25-204ENST00000570749 CCDC129Q6ZRS4 1044 aa11.44□□□□□ -0.58
TRIM25-204ENST00000570749 MFSD6Q6ZSS7 791 aa11.44□□□□□ -0.58
TRIM25-204ENST00000570749 CPXCR1Q8N123 301 aa11.44□□□□□ -0.58
TRIM25-204ENST00000570749 FAM227BQ96M60 508 aa11.44□□□□□ -0.58
TRIM25-204ENST00000570749 LBHD1Q9BQE6 289 aaPredicted RBP11.44□□□□□ -0.58
TRIM25-204ENST00000570749 TSEN34Q9BSV6 310 aaKnown RBP11.44□□□□□ -0.58
TRIM25-204ENST00000570749 MAF1Q9H063 256 aa11.44□□□□□ -0.58
TRIM25-204ENST00000570749 XPNPEP3Q9NQH7 507 aa11.44□□□□□ -0.58
TRIM25-204ENST00000570749 DIAPH3Q9NSV4 1193 aa11.44□□□□□ -0.58
TRIM25-204ENST00000570749 FAM184BQ9ULE4 1060 aa11.44□□□□□ -0.58
TRIM25-204ENST00000570749 ISY1Q9ULR0 285 aaKnown RBP11.44□□□□□ -0.58
TRIM25-204ENST00000570749 MOXD2PA6NHM9 499 aa11.43□□□□□ -0.58
TRIM25-204ENST00000570749 SDSP20132 328 aa11.43□□□□□ -0.58
TRIM25-204ENST00000570749 NMIQ13287 307 aaPredicted RBP11.43□□□□□ -0.58
TRIM25-204ENST00000570749 LRRC41Q15345 812 aa11.43□□□□□ -0.58
TRIM25-204ENST00000570749 LRIT3Q3SXY7 679 aa11.43□□□□□ -0.58
TRIM25-204ENST00000570749 AKNAD1Q5T1N1 836 aa11.43□□□□□ -0.58
TRIM25-204ENST00000570749 VPS53Q5VIR6 699 aa11.43□□□□□ -0.58
TRIM25-204ENST00000570749 B4GALNT3Q6L9W6 998 aa11.43□□□□□ -0.58
TRIM25-204ENST00000570749 PLEKHM2Q8IWE5 1019 aa11.43□□□□□ -0.58
TRIM25-204ENST00000570749 TDHQ8IZJ6 230 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms