RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 P2RX7Q99572 595 aaKnown RBP7.89□□□□□ -1.15
SMG6-204ENST00000570606 C11orf49Q9H6J7 331 aa7.89□□□□□ -1.15
SMG6-204ENST00000570606 TXNRD2Q9NNW7 524 aa7.89□□□□□ -1.15
SMG6-204ENST00000570606 GJD2Q9UKL4 321 aa7.89□□□□□ -1.15
SMG6-204ENST00000570606 ZMYND8Q9ULU4 1186 aaPredicted RBP7.89□□□□□ -1.15
SMG6-204ENST00000570606 BAZ2AQ9UIF9 1905 aaKnown RBP7.89□□□□□ -1.15
SMG6-204ENST00000570606 CUL9Q8IWT3 2517 aa7.89□□□□□ -1.15
SMG6-204ENST00000570606 RLBP1P12271 317 aa7.88□□□□□ -1.15
SMG6-204ENST00000570606 JUNDP17535 347 aa7.88□□□□□ -1.15
SMG6-204ENST00000570606 USP14P54578 494 aa7.88□□□□□ -1.15
SMG6-204ENST00000570606 JAG1P78504 1218 aa7.88□□□□□ -1.15
SMG6-204ENST00000570606 PTPRNQ16849 979 aa7.88□□□□□ -1.15
SMG6-204ENST00000570606 MSS51Q4VC12 460 aa7.88□□□□□ -1.15
SMG6-204ENST00000570606 WDR78Q5VTH9 848 aa7.88□□□□□ -1.15
SMG6-204ENST00000570606 CEP85Q6P2H3 762 aa7.88□□□□□ -1.15
SMG6-204ENST00000570606 GPR142Q7Z601 462 aa7.88□□□□□ -1.15
SMG6-204ENST00000570606 PLEKHH3Q7Z736 793 aa7.88□□□□□ -1.15
SMG6-204ENST00000570606 METTL16Q86W50 562 aaKnown RBP7.88□□□□□ -1.15
SMG6-204ENST00000570606 TRMT44Q8IYL2 757 aaKnown RBP7.88□□□□□ -1.15
SMG6-204ENST00000570606 EAF2Q96CJ1 260 aaPredicted RBP7.88□□□□□ -1.15
SMG6-204ENST00000570606 APBA2Q99767 749 aa7.88□□□□□ -1.15
SMG6-204ENST00000570606 PORCNQ9H237 461 aa7.88□□□□□ -1.15
SMG6-204ENST00000570606 PRO3102Q9H379 93 aa7.88□□□□□ -1.15
SMG6-204ENST00000570606 ALG2Q9H553 416 aa7.88□□□□□ -1.15
SMG6-204ENST00000570606 SERPINB13Q9UIV8 391 aa7.88□□□□□ -1.15
SMG6-204ENST00000570606 EXOC6BQ9Y2D4 811 aa7.88□□□□□ -1.15
SMG6-204ENST00000570606 NOP58Q9Y2X3 529 aaKnown RBP7.88□□□□□ -1.15
SMG6-204ENST00000570606 A0A0G2JMZ2 1700 aa7.87□□□□□ -1.15
SMG6-204ENST00000570606 USP17L15C9J2P7 530 aa7.87□□□□□ -1.15
SMG6-204ENST00000570606 USP17L13C9JLJ4 530 aa7.87□□□□□ -1.15
SMG6-204ENST00000570606 USP17L11C9JVI0 530 aa7.87□□□□□ -1.15
SMG6-204ENST00000570606 USP17L18D6R9N7 530 aa7.87□□□□□ -1.15
SMG6-204ENST00000570606 USP17L22D6RA61 530 aa7.87□□□□□ -1.15
SMG6-204ENST00000570606 USP17L17D6RBQ6 530 aa7.87□□□□□ -1.15
SMG6-204ENST00000570606 USP17L19D6RCP7 530 aa7.87□□□□□ -1.15
SMG6-204ENST00000570606 USP17L20D6RJB6 530 aa7.87□□□□□ -1.15
SMG6-204ENST00000570606 GLRX3O76003 335 aaKnown RBP7.87□□□□□ -1.15
SMG6-204ENST00000570606 XRCC5P13010 732 aaKnown RBP7.87□□□□□ -1.15
SMG6-204ENST00000570606 VCAM1P19320 739 aa7.87□□□□□ -1.15
SMG6-204ENST00000570606 CCNA1P78396 465 aa7.87□□□□□ -1.15
SMG6-204ENST00000570606 USP17L24Q0WX57 530 aa7.87□□□□□ -1.15
SMG6-204ENST00000570606 ABCB5Q2M3G0 1257 aa7.87□□□□□ -1.15
SMG6-204ENST00000570606 CERKLQ49MI3 558 aaPredicted RBP7.87□□□□□ -1.15
SMG6-204ENST00000570606 TTC6Q86TZ1 520 aa7.87□□□□□ -1.15
SMG6-204ENST00000570606 FAM160A2Q8N612 972 aaPredicted RBP7.87□□□□□ -1.15
SMG6-204ENST00000570606 C12orf42Q96LP6 360 aa7.87□□□□□ -1.15
SMG6-204ENST00000570606 BCL11AQ9H165 835 aa7.87□□□□□ -1.15
SMG6-204ENST00000570606 EHD4Q9H223 541 aa7.87□□□□□ -1.15
SMG6-204ENST00000570606 ANTXR1Q9H6X2 564 aa7.87□□□□□ -1.15
SMG6-204ENST00000570606 CABP5Q9NP86 173 aa7.87□□□□□ -1.15
SMG6-204ENST00000570606 STAP2Q9UGK3 403 aa7.87□□□□□ -1.15
SMG6-204ENST00000570606 OGDHLQ9ULD0 1010 aa7.87□□□□□ -1.15
SMG6-204ENST00000570606 ZNF236Q9UL36 1845 aa7.87□□□□□ -1.15
SMG6-204ENST00000570606 MAGEB6P1A0A0J9YX57 407 aa7.86□□□□□ -1.15
SMG6-204ENST00000570606 POTEMA6NI47 508 aa7.86□□□□□ -1.15
SMG6-204ENST00000570606 MPHOSPH10O00566 681 aaKnown RBP7.86□□□□□ -1.15
SMG6-204ENST00000570606 SOX1O00570 391 aaPredicted RBP7.86□□□□□ -1.15
SMG6-204ENST00000570606 DXOO77932 396 aaKnown RBP7.86□□□□□ -1.15
SMG6-204ENST00000570606 POLR3DP05423 398 aaPredicted RBP7.86□□□□□ -1.15
SMG6-204ENST00000570606 SYN1P17600 705 aa7.86□□□□□ -1.15
SMG6-204ENST00000570606 CACNB2Q08289 660 aaPredicted RBP7.86□□□□□ -1.15
SMG6-204ENST00000570606 TTF1Q15361 905 aaPredicted RBP7.86□□□□□ -1.15
SMG6-204ENST00000570606 CCL14Q16627 93 aa7.86□□□□□ -1.15
SMG6-204ENST00000570606 HSP90AB4PQ58FF6 505 aa7.86□□□□□ -1.15
SMG6-204ENST00000570606 MAP3K21Q5TCX8 1036 aa7.86□□□□□ -1.15
SMG6-204ENST00000570606 MFSD14CQ5VZR4 134 aa7.86□□□□□ -1.15
SMG6-204ENST00000570606 TATDN1Q6P1N9 297 aa7.86□□□□□ -1.15
SMG6-204ENST00000570606 TMED8Q6PL24 325 aaPredicted RBP7.86□□□□□ -1.15
SMG6-204ENST00000570606 KCTD12Q96CX2 325 aaKnown RBP7.86□□□□□ -1.15
SMG6-204ENST00000570606 DNAJC2Q99543 621 aaKnown RBP7.86□□□□□ -1.15
SMG6-204ENST00000570606 CRNKL1Q9BZJ0 848 aaKnown RBP7.86□□□□□ -1.15
SMG6-204ENST00000570606 IL1RAPL2Q9NP60 686 aa7.86□□□□□ -1.15
SMG6-204ENST00000570606 MAP10Q9P2G4 905 aa7.86□□□□□ -1.15
SMG6-204ENST00000570606 RBPJLQ9UBG7 517 aa7.86□□□□□ -1.15
SMG6-204ENST00000570606 RABGAP1Q9Y3P9 1069 aa7.86□□□□□ -1.15
SMG6-204ENST00000570606 IVNS1ABPQ9Y6Y0 642 aa7.86□□□□□ -1.15
SMG6-204ENST00000570606 PARP14Q460N5 1801 aa7.86□□□□□ -1.15
SMG6-204ENST00000570606 COL11A1P12107 1806 aaPredicted RBP7.85□□□□□ -1.15
SMG6-204ENST00000570606 PFASO15067 1338 aa7.85□□□□□ -1.15
SMG6-204ENST00000570606 IFIT2P09913 472 aaKnown RBP7.85□□□□□ -1.15
SMG6-204ENST00000570606 PDE6AP16499 860 aa7.85□□□□□ -1.15
SMG6-204ENST00000570606 CCND3P30281 292 aaPredicted RBP7.85□□□□□ -1.15
SMG6-204ENST00000570606 SHMT1P34896 483 aa7.85□□□□□ -1.15
SMG6-204ENST00000570606 MAGEA10P43363 369 aaPredicted RBP7.85□□□□□ -1.15
SMG6-204ENST00000570606 MMP16P51512 607 aa7.85□□□□□ -1.15
SMG6-204ENST00000570606 COPS2P61201 443 aa7.85□□□□□ -1.15
SMG6-204ENST00000570606 CATSPERGQ6ZRH7 1159 aa7.85□□□□□ -1.15
SMG6-204ENST00000570606 NYAP1Q6ZVC0 841 aa7.85□□□□□ -1.15
SMG6-204ENST00000570606 CLASRPQ8N2M8 674 aaKnown RBP7.85□□□□□ -1.15
SMG6-204ENST00000570606 RHPN1Q8TCX5 695 aa7.85□□□□□ -1.15
SMG6-204ENST00000570606 ACER1Q8TDN7 264 aa7.85□□□□□ -1.15
SMG6-204ENST00000570606 PANK1Q8TE04 598 aa7.85□□□□□ -1.15
SMG6-204ENST00000570606 SPSB2Q99619 263 aa7.85□□□□□ -1.15
SMG6-204ENST00000570606 TANGO6Q9C0B7 1094 aa7.85□□□□□ -1.15
SMG6-204ENST00000570606 KIAA1683Q9H0B3 1180 aa7.85□□□□□ -1.15
SMG6-204ENST00000570606 RPAP3Q9H6T3 665 aaPredicted RBP7.85□□□□□ -1.15
SMG6-204ENST00000570606 MCM9Q9NXL9 1143 aa7.85□□□□□ -1.15
SMG6-204ENST00000570606 RLFQ13129 1914 aa7.85□□□□□ -1.15
SMG6-204ENST00000570606 ZBED9Q6R2W3 1325 aa7.84□□□□□ -1.15
SMG6-204ENST00000570606 ZNFX1Q9P2E3 1918 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms