RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 CDC25BP30305 580 aa9.15□□□□□ -0.94
TCF4-246ENST00000570287 CLCN6P51797 869 aa9.15□□□□□ -0.94
TCF4-246ENST00000570287 MCL1Q07820 350 aa9.15□□□□□ -0.94
TCF4-246ENST00000570287 CEP135Q66GS9 1140 aa9.15□□□□□ -0.94
TCF4-246ENST00000570287 CTR9Q6PD62 1173 aa9.15□□□□□ -0.94
TCF4-246ENST00000570287 SPC24Q8NBT2 197 aa9.15□□□□□ -0.94
TCF4-246ENST00000570287 ELP1O95163 1332 aa9.15□□□□□ -0.94
TCF4-246ENST00000570287 EP400NLQ6ZTU2 488 aa9.15□□□□□ -0.95
TCF4-246ENST00000570287 CDC37L1Q7L3B6 337 aa9.15□□□□□ -0.95
TCF4-246ENST00000570287 DHX32Q7L7V1 743 aaKnown RBP9.15□□□□□ -0.95
TCF4-246ENST00000570287 FAM169BQ8N8A8 192 aa9.15□□□□□ -0.95
TCF4-246ENST00000570287 C1orf131Q8NDD1 294 aaKnown RBP9.15□□□□□ -0.95
TCF4-246ENST00000570287 TRIM56Q9BRZ2 755 aaKnown RBP9.15□□□□□ -0.95
TCF4-246ENST00000570287 TAGLN3Q9UI15 199 aa9.15□□□□□ -0.95
TCF4-246ENST00000570287 LRFN2Q9ULH4 789 aa9.15□□□□□ -0.95
TCF4-246ENST00000570287 PLCH1Q4KWH8 1693 aa9.15□□□□□ -0.95
TCF4-246ENST00000570287 BCL9O00512 1426 aa9.14□□□□□ -0.95
TCF4-246ENST00000570287 CCDC192P0DO97 292 aa9.14□□□□□ -0.95
TCF4-246ENST00000570287 HSPD1P10809 573 aaKnown RBP9.14□□□□□ -0.95
TCF4-246ENST00000570287 LRMPQ12912 555 aa9.14□□□□□ -0.95
TCF4-246ENST00000570287 NFX1Q12986 1120 aaKnown RBP9.14□□□□□ -0.95
TCF4-246ENST00000570287 IFIT5Q13325 482 aaKnown RBP9.14□□□□□ -0.95
TCF4-246ENST00000570287 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.14□□□□□ -0.95
TCF4-246ENST00000570287 ARMCX6Q7L4S7 300 aa9.14□□□□□ -0.95
TCF4-246ENST00000570287 CCDC186Q7Z3E2 898 aa9.14□□□□□ -0.95
TCF4-246ENST00000570287 FAM89AQ96GI7 184 aa9.14□□□□□ -0.95
TCF4-246ENST00000570287 SIRPGQ9P1W8 387 aa9.14□□□□□ -0.95
TCF4-246ENST00000570287 LAMA4Q16363 1823 aa9.14□□□□□ -0.95
TCF4-246ENST00000570287 MAST3O60307 1309 aa9.14□□□□□ -0.95
TCF4-246ENST00000570287 ZFYP08048 801 aaPredicted RBP9.14□□□□□ -0.95
TCF4-246ENST00000570287 STK3Q13188 491 aa9.14□□□□□ -0.95
TCF4-246ENST00000570287 TTC39AQ5SRH9 613 aa9.14□□□□□ -0.95
TCF4-246ENST00000570287 STOX1Q6ZVD7 989 aa9.14□□□□□ -0.95
TCF4-246ENST00000570287 ZNF513Q8N8E2 541 aaPredicted RBP9.14□□□□□ -0.95
TCF4-246ENST00000570287 XAGE2Q96GT9 111 aa9.14□□□□□ -0.95
TCF4-246ENST00000570287 LLPHQ9BRT6 129 aaKnown RBP9.14□□□□□ -0.95
TCF4-246ENST00000570287 RASSF4Q9H2L5 321 aa9.14□□□□□ -0.95
TCF4-246ENST00000570287 TMEM260Q9NX78 707 aa9.14□□□□□ -0.95
TCF4-246ENST00000570287 PFKFB2O60825 505 aa9.14□□□□□ -0.95
TCF4-246ENST00000570287 SWT1Q5T5J6 900 aaKnown RBP9.14□□□□□ -0.95
TCF4-246ENST00000570287 RBM43Q6ZSC3 357 aaKnown RBP9.14□□□□□ -0.95
TCF4-246ENST00000570287 RETREG3Q86VR2 466 aa9.14□□□□□ -0.95
TCF4-246ENST00000570287 AGXT2Q9BYV1 514 aa9.14□□□□□ -0.95
TCF4-246ENST00000570287 SCAND2PQ9GZW5 306 aaPredicted RBP9.14□□□□□ -0.95
TCF4-246ENST00000570287 L2HGDHQ9H9P8 463 aa9.14□□□□□ -0.95
TCF4-246ENST00000570287 ANKRD36CQ5JPF3 1778 aa9.13□□□□□ -0.95
TCF4-246ENST00000570287 DTNBO60941 627 aa9.13□□□□□ -0.95
TCF4-246ENST00000570287 ZRANB2O95218 330 aaKnown RBP eCLIP9.13□□□□□ -0.95
TCF4-246ENST00000570287 CYP19A1P11511 503 aaPredicted RBP9.13□□□□□ -0.95
TCF4-246ENST00000570287 SIM2Q14190 667 aaPredicted RBP9.13□□□□□ -0.95
TCF4-246ENST00000570287 COX20Q5RI15 118 aa9.13□□□□□ -0.95
TCF4-246ENST00000570287 NLRP10Q86W26 655 aa9.13□□□□□ -0.95
TCF4-246ENST00000570287 TXLNBQ8N3L3 684 aa9.13□□□□□ -0.95
TCF4-246ENST00000570287 SMARCC2Q8TAQ2 1214 aa9.13□□□□□ -0.95
TCF4-246ENST00000570287 OCEL1Q9H607 264 aa9.13□□□□□ -0.95
TCF4-246ENST00000570287 ADAMTS1Q9UHI8 967 aa9.13□□□□□ -0.95
TCF4-246ENST00000570287 DAAM1Q9Y4D1 1078 aa9.13□□□□□ -0.95
TCF4-246ENST00000570287 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.13□□□□□ -0.95
TCF4-246ENST00000570287 NPHP1O15259 732 aa9.13□□□□□ -0.95
TCF4-246ENST00000570287 DHX16O60231 1041 aaKnown RBP9.13□□□□□ -0.95
TCF4-246ENST00000570287 PLA2G4AP47712 749 aa9.13□□□□□ -0.95
TCF4-246ENST00000570287 TRAPPC10P48553 1259 aa9.13□□□□□ -0.95
TCF4-246ENST00000570287 ZNF75DP51815 510 aa9.13□□□□□ -0.95
TCF4-246ENST00000570287 ELF2Q15723 593 aa9.13□□□□□ -0.95
TCF4-246ENST00000570287 ALG1LQ6GMV1 187 aa9.13□□□□□ -0.95
TCF4-246ENST00000570287 TTC6Q86TZ1 520 aa9.13□□□□□ -0.95
TCF4-246ENST00000570287 TDRD7Q8NHU6 1098 aaKnown RBP9.13□□□□□ -0.95
TCF4-246ENST00000570287 BRF1Q92994 677 aa9.13□□□□□ -0.95
TCF4-246ENST00000570287 ALKBH8Q96BT7 664 aaKnown RBP9.13□□□□□ -0.95
TCF4-246ENST00000570287 E7EWF7 191 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 IRS4O14654 1257 aaPredicted RBP9.12□□□□□ -0.95
TCF4-246ENST00000570287 TRIM37O94972 964 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 SLC34A2O95436 690 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 ADORA1P30542 326 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 KANK3Q6NY19 840 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 TNS4Q8IZW8 715 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 PAF1Q8N7H5 531 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 SPON2Q9BUD6 331 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 TSPAN10Q9H1Z9 355 aaPredicted RBP9.12□□□□□ -0.95
TCF4-246ENST00000570287 ARHGEF10LQ9HCE6 1279 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 PFDN2Q9UHV9 154 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 CEP83Q9Y592 693 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 COL22A1Q8NFW1 1626 aaPredicted RBP9.12□□□□□ -0.95
TCF4-246ENST00000570287 M0R2C6 588 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 NEMFO60524 1076 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 JAK2O60674 1132 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 LDHCP07864 332 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 SCP2P22307 547 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 SCRN1Q12765 414 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 HLFQ16534 295 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 C16orf46Q6P387 395 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 FBXL16Q8N461 479 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 RASGRP4Q8TDF6 673 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 CACTINQ8WUQ7 758 aaKnown RBP9.12□□□□□ -0.95
TCF4-246ENST00000570287 ZSCAN16Q9H4T2 348 aaPredicted RBP9.12□□□□□ -0.95
TCF4-246ENST00000570287 RSPH14Q9UHP6 348 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 RIC1Q4ADV7 1423 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 ERVV-1B6SEH8 477 aa9.12□□□□□ -0.95
TCF4-246ENST00000570287 SLU7O95391 586 aaKnown RBP9.12□□□□□ -0.95
TCF4-246ENST00000570287 NOS2P35228 1153 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms