RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 SEC63Q9UGP8 760 aaKnown RBP17.84■□□□□ 0.45
HERPUD1-219ENST00000570273 VPS37CA5D8V6 355 aaPredicted RBP17.83■□□□□ 0.45
HERPUD1-219ENST00000570273 H3BQV1 296 aa17.83■□□□□ 0.45
HERPUD1-219ENST00000570273 SYT1P21579 422 aa17.83■□□□□ 0.45
HERPUD1-219ENST00000570273 IFFO2Q5TF58 517 aa17.83■□□□□ 0.45
HERPUD1-219ENST00000570273 BTNL9Q6UXG8 535 aa17.83■□□□□ 0.45
HERPUD1-219ENST00000570273 FAM160B2Q86V87 743 aa17.83■□□□□ 0.45
HERPUD1-219ENST00000570273 ADGRF4Q8IZF3 695 aa17.83■□□□□ 0.45
HERPUD1-219ENST00000570273 WNK4Q96J92 1243 aa17.83■□□□□ 0.45
HERPUD1-219ENST00000570273 C8orf76Q96K31 380 aa17.83■□□□□ 0.45
HERPUD1-219ENST00000570273 PIGSQ96S52 555 aa17.83■□□□□ 0.45
HERPUD1-219ENST00000570273 FEM1BQ9UK73 627 aa17.83■□□□□ 0.45
HERPUD1-219ENST00000570273 KCNH4Q9UQ05 1017 aa17.83■□□□□ 0.45
HERPUD1-219ENST00000570273 STX6O43752 255 aa17.82■□□□□ 0.44
HERPUD1-219ENST00000570273 SCG2P13521 617 aa17.82■□□□□ 0.44
HERPUD1-219ENST00000570273 GJA5P36382 358 aa17.82■□□□□ 0.44
HERPUD1-219ENST00000570273 NUCB2P80303 420 aa17.82■□□□□ 0.44
HERPUD1-219ENST00000570273 TRIM29Q14134 588 aa17.82■□□□□ 0.44
HERPUD1-219ENST00000570273 PKN1Q16512 942 aa17.82■□□□□ 0.44
HERPUD1-219ENST00000570273 SAMD1Q6SPF0 538 aaPredicted RBP17.82■□□□□ 0.44
HERPUD1-219ENST00000570273 GADL1Q6ZQY3 521 aa17.82■□□□□ 0.44
HERPUD1-219ENST00000570273 CHURC1Q8WUH1 139 aa17.82■□□□□ 0.44
HERPUD1-219ENST00000570273 JMJD4Q9H9V9 463 aa17.82■□□□□ 0.44
HERPUD1-219ENST00000570273 A0A0G2JLL6 359 aaPredicted RBP17.81■□□□□ 0.44
HERPUD1-219ENST00000570273 PLA2G6O60733 806 aa17.81■□□□□ 0.44
HERPUD1-219ENST00000570273 APLP1P51693 650 aa17.81■□□□□ 0.44
HERPUD1-219ENST00000570273 GUCY1B3Q02153 619 aa17.81■□□□□ 0.44
HERPUD1-219ENST00000570273 PKP1Q13835 747 aa17.81■□□□□ 0.44
HERPUD1-219ENST00000570273 PFKFB3Q16875 520 aaPredicted RBP17.81■□□□□ 0.44
HERPUD1-219ENST00000570273 PRRT2Q7Z6L0 340 aaPredicted RBP17.81■□□□□ 0.44
HERPUD1-219ENST00000570273 KIFC2Q96AC6 838 aa17.81■□□□□ 0.44
HERPUD1-219ENST00000570273 SLF1Q9BQI6 1058 aa17.81■□□□□ 0.44
HERPUD1-219ENST00000570273 FBXO28Q9NVF7 368 aa17.81■□□□□ 0.44
HERPUD1-219ENST00000570273 FLOT1O75955 427 aa17.81■□□□□ 0.44
HERPUD1-219ENST00000570273 XBP1P17861 261 aa17.81■□□□□ 0.44
HERPUD1-219ENST00000570273 SNAPC2Q13487 334 aa17.81■□□□□ 0.44
HERPUD1-219ENST00000570273 CDC37Q16543 378 aaPredicted RBP17.81■□□□□ 0.44
HERPUD1-219ENST00000570273 FOXD4L5Q5VV16 416 aaPredicted RBP17.81■□□□□ 0.44
HERPUD1-219ENST00000570273 OTUD7BQ6GQQ9 843 aa17.81■□□□□ 0.44
HERPUD1-219ENST00000570273 HEATR3Q7Z4Q2 680 aa17.81■□□□□ 0.44
HERPUD1-219ENST00000570273 FOXD4L4Q8WXT5 416 aaPredicted RBP17.81■□□□□ 0.44
HERPUD1-219ENST00000570273 GPKOWQ92917 476 aaPredicted RBP eCLIP17.81■□□□□ 0.441e-6■■■■□ 19.7
HERPUD1-219ENST00000570273 PRR12Q9ULL5 1215 aa17.81■□□□□ 0.44
HERPUD1-219ENST00000570273 WDR33Q9C0J8 1336 aaKnown RBP17.8■□□□□ 0.44
HERPUD1-219ENST00000570273 PNMA6FA0A0J9YX94 578 aa17.8■□□□□ 0.44
HERPUD1-219ENST00000570273 ZBTB5O15062 677 aa17.8■□□□□ 0.44
HERPUD1-219ENST00000570273 PDIA4P13667 645 aaKnown RBP17.8■□□□□ 0.44
HERPUD1-219ENST00000570273 MKRN3Q13064 507 aaKnown RBP17.8■□□□□ 0.44
HERPUD1-219ENST00000570273 WWC2Q6AWC2 1192 aa17.8■□□□□ 0.44
HERPUD1-219ENST00000570273 PROCA1Q8NCQ7 364 aaPredicted RBP17.8■□□□□ 0.44
HERPUD1-219ENST00000570273 MTMR8Q96EF0 704 aa17.8■□□□□ 0.44
HERPUD1-219ENST00000570273 VPS54Q9P1Q0 977 aa17.8■□□□□ 0.44
HERPUD1-219ENST00000570273 MTMR6Q9Y217 621 aa17.8■□□□□ 0.44
HERPUD1-219ENST00000570273 LOC285556D6RIA3 1793 aa17.79■□□□□ 0.44
HERPUD1-219ENST00000570273 USP17L15C9J2P7 530 aa17.79■□□□□ 0.44
HERPUD1-219ENST00000570273 USP17L13C9JLJ4 530 aa17.79■□□□□ 0.44
HERPUD1-219ENST00000570273 USP17L11C9JVI0 530 aa17.79■□□□□ 0.44
HERPUD1-219ENST00000570273 USP17L18D6R9N7 530 aa17.79■□□□□ 0.44
HERPUD1-219ENST00000570273 USP17L22D6RA61 530 aa17.79■□□□□ 0.44
HERPUD1-219ENST00000570273 USP17L17D6RBQ6 530 aa17.79■□□□□ 0.44
HERPUD1-219ENST00000570273 USP17L19D6RCP7 530 aa17.79■□□□□ 0.44
HERPUD1-219ENST00000570273 USP17L20D6RJB6 530 aa17.79■□□□□ 0.44
HERPUD1-219ENST00000570273 BRD1O95696 1058 aa17.79■□□□□ 0.44
HERPUD1-219ENST00000570273 SNAP25P60880 206 aa17.79■□□□□ 0.44
HERPUD1-219ENST00000570273 USP17L24Q0WX57 530 aa17.79■□□□□ 0.44
HERPUD1-219ENST00000570273 QRICH1Q2TAL8 776 aa17.79■□□□□ 0.44
HERPUD1-219ENST00000570273 TREML2Q5T2D2 321 aa17.79■□□□□ 0.44
HERPUD1-219ENST00000570273 SPRYD7Q5W111 196 aa17.79■□□□□ 0.44
HERPUD1-219ENST00000570273 KRT40Q6A162 431 aa17.79■□□□□ 0.44
HERPUD1-219ENST00000570273 FBXO18Q8NFZ0 1043 aa17.79■□□□□ 0.44
HERPUD1-219ENST00000570273 GJB4Q9NTQ9 266 aa17.79■□□□□ 0.44
HERPUD1-219ENST00000570273 PPP1R9AQ9ULJ8 1098 aa17.79■□□□□ 0.44
HERPUD1-219ENST00000570273 ABT1Q9ULW3 272 aaKnown RBP17.79■□□□□ 0.44
HERPUD1-219ENST00000570273 TLL2Q9Y6L7 1015 aa17.79■□□□□ 0.44
HERPUD1-219ENST00000570273 PTPRFP10586 1907 aa17.78■□□□□ 0.44
HERPUD1-219ENST00000570273 TMEM88BA6NKF7 163 aa17.78■□□□□ 0.44
HERPUD1-219ENST00000570273 hCG_1984214I3L0E3 225 aa17.78■□□□□ 0.44
HERPUD1-219ENST00000570273 ZSCAN22P10073 491 aaPredicted RBP17.78■□□□□ 0.44
HERPUD1-219ENST00000570273 ZBTB48P10074 688 aaPredicted RBP17.78■□□□□ 0.44
HERPUD1-219ENST00000570273 ZNF157P51786 506 aaPredicted RBP17.78■□□□□ 0.44
HERPUD1-219ENST00000570273 FASTKD5Q7L8L6 764 aaKnown RBP17.78■□□□□ 0.44
HERPUD1-219ENST00000570273 SAPCD2Q86UD0 394 aa17.78■□□□□ 0.44
HERPUD1-219ENST00000570273 RASAL3Q86YV0 1011 aa17.78■□□□□ 0.44
HERPUD1-219ENST00000570273 ZNF713Q8N859 430 aaPredicted RBP17.78■□□□□ 0.44
HERPUD1-219ENST00000570273 BAZ2BQ9UIF8 2168 aaKnown RBP17.78■□□□□ 0.44
HERPUD1-219ENST00000570273 MYH6P13533 1939 aa17.77■□□□□ 0.44
HERPUD1-219ENST00000570273 STXBP3O00186 592 aa17.77■□□□□ 0.44
HERPUD1-219ENST00000570273 GTF2A2P52657 109 aa17.77■□□□□ 0.44
HERPUD1-219ENST00000570273 NAPAP54920 295 aa17.77■□□□□ 0.44
HERPUD1-219ENST00000570273 RGMBQ6NW40 437 aa17.77■□□□□ 0.44
HERPUD1-219ENST00000570273 CATSPERGQ6ZRH7 1159 aa17.77■□□□□ 0.44
HERPUD1-219ENST00000570273 PRPF38AQ8NAV1 312 aaKnown RBP17.77■□□□□ 0.44
HERPUD1-219ENST00000570273 CCDC148Q8NFR7 591 aa17.77■□□□□ 0.44
HERPUD1-219ENST00000570273 RANBP17Q9H2T7 1088 aaKnown RBP17.77■□□□□ 0.44
HERPUD1-219ENST00000570273 SH3GLB2Q9NR46 395 aa17.77■□□□□ 0.44
HERPUD1-219ENST00000570273 BARHL2Q9NY43 387 aa17.77■□□□□ 0.44
HERPUD1-219ENST00000570273 KCNJ14Q9UNX9 436 aa17.77■□□□□ 0.44
HERPUD1-219ENST00000570273 AGTPBP1Q9UPW5 1226 aa17.77■□□□□ 0.44
HERPUD1-219ENST00000570273 ZDHHC9Q9Y397 364 aa17.77■□□□□ 0.44
HERPUD1-219ENST00000570273 CTDP1Q9Y5B0 961 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms