RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 SV2BQ7L1I2 683 aa7.95□□□□□ -1.14
UBFD1-209ENST00000569919 TTC9Q92623 222 aa7.95□□□□□ -1.14
UBFD1-209ENST00000569919 FMNL2Q96PY5 1086 aa7.95□□□□□ -1.14
UBFD1-209ENST00000569919 TRIM56Q9BRZ2 755 aaKnown RBP7.95□□□□□ -1.14
UBFD1-209ENST00000569919 POLR3GLQ9BT43 218 aa7.95□□□□□ -1.14
UBFD1-209ENST00000569919 CEP44Q9C0F1 390 aa7.95□□□□□ -1.14
UBFD1-209ENST00000569919 CCSER2Q9H7U1 834 aa7.95□□□□□ -1.14
UBFD1-209ENST00000569919 PANK3Q9H999 370 aa7.95□□□□□ -1.14
UBFD1-209ENST00000569919 SRA1Q9HD15 236 aaKnown RBP7.95□□□□□ -1.14
UBFD1-209ENST00000569919 COPRSQ9NQ92 184 aa7.95□□□□□ -1.14
UBFD1-209ENST00000569919 SEC31BQ9NQW1 1179 aa7.95□□□□□ -1.14
UBFD1-209ENST00000569919 ADARB2Q9NS39 739 aaKnown RBP7.95□□□□□ -1.14
UBFD1-209ENST00000569919 STARD13Q9Y3M8 1113 aa7.95□□□□□ -1.14
UBFD1-209ENST00000569919 CASP8AP2Q9UKL3 1982 aa7.95□□□□□ -1.14
UBFD1-209ENST00000569919 CIAPIN1Q6FI81 312 aa7.94□□□□□ -1.14
UBFD1-209ENST00000569919 GDF6Q6KF10 455 aaPredicted RBP7.94□□□□□ -1.14
UBFD1-209ENST00000569919 VN1R5Q7Z5H4 357 aa7.94□□□□□ -1.14
UBFD1-209ENST00000569919 ZNF654Q8IZM8 581 aa7.94□□□□□ -1.14
UBFD1-209ENST00000569919 RSRP1Q9BUV0 290 aa7.94□□□□□ -1.14
UBFD1-209ENST00000569919 ADAM19Q9H013 955 aa7.94□□□□□ -1.14
UBFD1-209ENST00000569919 VPS33BQ9H267 617 aa7.94□□□□□ -1.14
UBFD1-209ENST00000569919 CLEC4MQ9H2X3 399 aaPredicted RBP7.94□□□□□ -1.14
UBFD1-209ENST00000569919 ACBD3Q9H3P7 528 aa7.94□□□□□ -1.14
UBFD1-209ENST00000569919 SH2B1Q9NRF2 756 aaPredicted RBP7.94□□□□□ -1.14
UBFD1-209ENST00000569919 PGAP2Q9UHJ9 254 aa7.94□□□□□ -1.14
UBFD1-209ENST00000569919 SOX13Q9UN79 622 aa7.94□□□□□ -1.14
UBFD1-209ENST00000569919 NIP7Q9Y221 180 aaKnown RBP eCLIP7.94□□□□□ -1.14
UBFD1-209ENST00000569919 MRC1P22897 1456 aa7.94□□□□□ -1.14
UBFD1-209ENST00000569919 THSD7BQ9C0I4 1608 aa7.93□□□□□ -1.14
UBFD1-209ENST00000569919 COL11A2P13942 1736 aaPredicted RBP7.93□□□□□ -1.14
UBFD1-209ENST00000569919 ARFGEF2Q9Y6D5 1785 aa7.93□□□□□ -1.14
UBFD1-209ENST00000569919 GNAT3A8MTJ3 354 aa7.93□□□□□ -1.14
UBFD1-209ENST00000569919 HMOX1P09601 288 aa7.93□□□□□ -1.14
UBFD1-209ENST00000569919 ZNF157P51786 506 aaPredicted RBP7.93□□□□□ -1.14
UBFD1-209ENST00000569919 C20orf204Q6ZNR8 217 aa7.93□□□□□ -1.14
UBFD1-209ENST00000569919 CDC37L1Q7L3B6 337 aa7.93□□□□□ -1.14
UBFD1-209ENST00000569919 EDARADDQ8WWZ3 215 aa7.93□□□□□ -1.14
UBFD1-209ENST00000569919 GCC1Q96CN9 775 aa7.93□□□□□ -1.14
UBFD1-209ENST00000569919 NECAB3Q96P71 396 aaPredicted RBP7.93□□□□□ -1.14
UBFD1-209ENST00000569919 TMX4Q9H1E5 349 aaPredicted RBP7.93□□□□□ -1.14
UBFD1-209ENST00000569919 JPH1Q9HDC5 661 aaPredicted RBP7.93□□□□□ -1.14
UBFD1-209ENST00000569919 KBTBD4Q9NVX7 518 aa7.93□□□□□ -1.14
UBFD1-209ENST00000569919 GPRC5DQ9NZD1 345 aa7.93□□□□□ -1.14
UBFD1-209ENST00000569919 USP16Q9Y5T5 823 aa7.93□□□□□ -1.14
UBFD1-209ENST00000569919 TRPM7Q96QT4 1865 aa7.93□□□□□ -1.14
UBFD1-209ENST00000569919 CACNA1SQ13698 1873 aa7.92□□□□□ -1.14
UBFD1-209ENST00000569919 F6X3S4 739 aa7.92□□□□□ -1.14
UBFD1-209ENST00000569919 ENC1O14682 589 aa7.92□□□□□ -1.14
UBFD1-209ENST00000569919 ALBP02768 609 aa7.92□□□□□ -1.14
UBFD1-209ENST00000569919 CELA3AP09093 270 aa7.92□□□□□ -1.14
UBFD1-209ENST00000569919 CDC27P30260 824 aa7.92□□□□□ -1.14
UBFD1-209ENST00000569919 SOX10P56693 466 aa7.92□□□□□ -1.14
UBFD1-209ENST00000569919 PCDH1Q08174 1060 aa7.92□□□□□ -1.14
UBFD1-209ENST00000569919 MAP3K11Q16584 847 aa7.92□□□□□ -1.14
UBFD1-209ENST00000569919 ZNF423Q2M1K9 1284 aa7.92□□□□□ -1.14
UBFD1-209ENST00000569919 RELL1Q8IUW5 271 aa7.92□□□□□ -1.14
UBFD1-209ENST00000569919 NIM1KQ8IY84 436 aa7.92□□□□□ -1.14
UBFD1-209ENST00000569919 GALNT6Q8NCL4 622 aa7.92□□□□□ -1.14
UBFD1-209ENST00000569919 IL17REQ8NFR9 667 aa7.92□□□□□ -1.14
UBFD1-209ENST00000569919 NYXQ9GZU5 481 aa7.92□□□□□ -1.14
UBFD1-209ENST00000569919 SAGE1Q9NXZ1 904 aa7.92□□□□□ -1.14
UBFD1-209ENST00000569919 GPN3Q9UHW5 284 aaPredicted RBP7.92□□□□□ -1.14
UBFD1-209ENST00000569919 KNSTRNQ9Y448 316 aa7.92□□□□□ -1.14
UBFD1-209ENST00000569919 FAM177BA6PVY3 158 aa7.91□□□□□ -1.14
UBFD1-209ENST00000569919 BTBD11A6QL63 1104 aa7.91□□□□□ -1.14
UBFD1-209ENST00000569919 IGSF3O75054 1194 aa7.91□□□□□ -1.14
UBFD1-209ENST00000569919 RLBP1P12271 317 aa7.91□□□□□ -1.14
UBFD1-209ENST00000569919 HOXA10P31260 410 aaPredicted RBP7.91□□□□□ -1.14
UBFD1-209ENST00000569919 TNNI2P48788 182 aa7.91□□□□□ -1.14
UBFD1-209ENST00000569919 PWP1Q13610 501 aa7.91□□□□□ -1.14
UBFD1-209ENST00000569919 GRIK5Q16478 980 aa7.91□□□□□ -1.14
UBFD1-209ENST00000569919 CRY2Q49AN0 593 aa7.91□□□□□ -1.14
UBFD1-209ENST00000569919 CACTIN-AS1Q8N1I8 211 aa7.91□□□□□ -1.14
UBFD1-209ENST00000569919 RPGRQ92834 1020 aaKnown RBP7.91□□□□□ -1.14
UBFD1-209ENST00000569919 GLIS2Q9BZE0 524 aaPredicted RBP7.91□□□□□ -1.14
UBFD1-209ENST00000569919 ZNF408Q9H9D4 720 aa7.91□□□□□ -1.14
UBFD1-209ENST00000569919 CAPN10Q9HC96 672 aa7.91□□□□□ -1.14
UBFD1-209ENST00000569919 TMEM39AQ9NV64 488 aa7.91□□□□□ -1.14
UBFD1-209ENST00000569919 MINDY4BA8MYZ0 360 aa7.9□□□□□ -1.14
UBFD1-209ENST00000569919 OIP5O43482 229 aa7.9□□□□□ -1.14
UBFD1-209ENST00000569919 DIAPH1O60610 1272 aaKnown RBP7.9□□□□□ -1.14
UBFD1-209ENST00000569919 PAGE1O75459 146 aa7.9□□□□□ -1.14
UBFD1-209ENST00000569919 SNRPA1P09661 255 aaKnown RBP7.9□□□□□ -1.14
UBFD1-209ENST00000569919 SLURP2P0DP57 97 aa7.9□□□□□ -1.14
UBFD1-209ENST00000569919 EPHA1P21709 976 aa7.9□□□□□ -1.14
UBFD1-209ENST00000569919 GBP2P32456 591 aaPredicted RBP7.9□□□□□ -1.14
UBFD1-209ENST00000569919 AFF1P51825 1210 aaKnown RBP7.9□□□□□ -1.14
UBFD1-209ENST00000569919 HUNKP57058 714 aa7.9□□□□□ -1.14
UBFD1-209ENST00000569919 CXCL9Q07325 125 aa7.9□□□□□ -1.14
UBFD1-209ENST00000569919 TNIP1Q15025 636 aa7.9□□□□□ -1.14
UBFD1-209ENST00000569919 PKN2Q16513 984 aaKnown RBP7.9□□□□□ -1.14
UBFD1-209ENST00000569919 RGMBQ6NW40 437 aa7.9□□□□□ -1.14
UBFD1-209ENST00000569919 KANK3Q6NY19 840 aa7.9□□□□□ -1.14
UBFD1-209ENST00000569919 CTU1Q7Z7A3 348 aaKnown RBP7.9□□□□□ -1.14
UBFD1-209ENST00000569919 IL22RA1Q8N6P7 574 aa7.9□□□□□ -1.14
UBFD1-209ENST00000569919 SUPT20HQ8NEM7 779 aa7.9□□□□□ -1.14
UBFD1-209ENST00000569919 RBM17Q96I25 401 aaKnown RBP7.9□□□□□ -1.14
UBFD1-209ENST00000569919 BTBD6Q96KE9 485 aa7.9□□□□□ -1.14
UBFD1-209ENST00000569919 TMEM74Q96NL1 305 aa7.9□□□□□ -1.14
UBFD1-209ENST00000569919 CRAMP1Q96RY5 1269 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 228.2 ms