RNA–Protein interactions for RNA: ENST00000569829.1

RPAP1-212, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 597 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-212ENST00000569829 NKX2-4Q9H2Z4 354 aa12.23□□□□□ -0.45
RPAP1-212ENST00000569829 VCPKMTQ9H867 229 aa12.23□□□□□ -0.45
RPAP1-212ENST00000569829 ARMT1Q9H993 441 aa12.23□□□□□ -0.45
RPAP1-212ENST00000569829 DCP1AQ9NPI6 582 aaPredicted RBP12.23□□□□□ -0.45
RPAP1-212ENST00000569829 SLC5A4Q9NY91 659 aa12.23□□□□□ -0.45
RPAP1-212ENST00000569829 THEGQ9P2T0 379 aa12.23□□□□□ -0.45
RPAP1-212ENST00000569829 YBX2Q9Y2T7 364 aaKnown RBP12.23□□□□□ -0.45
RPAP1-212ENST00000569829 TMX2Q9Y320 296 aa12.23□□□□□ -0.45
RPAP1-212ENST00000569829 RIPK3Q9Y572 518 aa12.23□□□□□ -0.45
RPAP1-212ENST00000569829 MCM3APO60318 1980 aa12.23□□□□□ -0.45
RPAP1-212ENST00000569829 BAZ2AQ9UIF9 1905 aaKnown RBP12.23□□□□□ -0.45
RPAP1-212ENST00000569829 ZNF532Q9HCE3 1301 aa12.22□□□□□ -0.45
RPAP1-212ENST00000569829 RAD21O60216 631 aa12.22□□□□□ -0.45
RPAP1-212ENST00000569829 AKR1A1P14550 325 aa12.22□□□□□ -0.45
RPAP1-212ENST00000569829 MYOGP15173 224 aa12.22□□□□□ -0.45
RPAP1-212ENST00000569829 PDE6AP16499 860 aa12.22□□□□□ -0.45
RPAP1-212ENST00000569829 SLC4A3P48751 1232 aa12.22□□□□□ -0.45
RPAP1-212ENST00000569829 TFF2Q03403 129 aa12.22□□□□□ -0.45
RPAP1-212ENST00000569829 ICA1Q05084 483 aa12.22□□□□□ -0.45
RPAP1-212ENST00000569829 RASIP1Q5U651 963 aa12.22□□□□□ -0.45
RPAP1-212ENST00000569829 MFSD5Q6N075 450 aa12.22□□□□□ -0.45
RPAP1-212ENST00000569829 TMEM179Q6ZVK1 233 aa12.22□□□□□ -0.45
RPAP1-212ENST00000569829 RIOX2Q8IUF8 465 aa12.22□□□□□ -0.45
RPAP1-212ENST00000569829 MICALL1Q8N3F8 863 aa12.22□□□□□ -0.45
RPAP1-212ENST00000569829 MB21D1Q8N884 522 aa12.22□□□□□ -0.45
RPAP1-212ENST00000569829 REPS2Q8NFH8 660 aa12.22□□□□□ -0.45
RPAP1-212ENST00000569829 NUP88Q99567 741 aaPredicted RBP12.22□□□□□ -0.45
RPAP1-212ENST00000569829 IL1RAPL2Q9NP60 686 aa12.22□□□□□ -0.45
RPAP1-212ENST00000569829 ZHX1Q9UKY1 873 aaPredicted RBP12.22□□□□□ -0.45
RPAP1-212ENST00000569829 ZNF214Q9UL59 606 aaPredicted RBP12.22□□□□□ -0.45
RPAP1-212ENST00000569829 ADAMTS5Q9UNA0 930 aa12.22□□□□□ -0.45
RPAP1-212ENST00000569829 DDX49Q9Y6V7 483 aaKnown RBP12.22□□□□□ -0.45
RPAP1-212ENST00000569829 MYH8P13535 1937 aa12.21□□□□□ -0.45
RPAP1-212ENST00000569829 TCRBV5S4A2TA0A5A2 114 aa12.21□□□□□ -0.45
RPAP1-212ENST00000569829 DCDC2CA8MYV0 355 aa12.21□□□□□ -0.45
RPAP1-212ENST00000569829 EEF2P13639 858 aaKnown RBP12.21□□□□□ -0.45
RPAP1-212ENST00000569829 CYP2C18P33260 490 aa12.21□□□□□ -0.45
RPAP1-212ENST00000569829 PLA2G5P39877 138 aa12.21□□□□□ -0.45
RPAP1-212ENST00000569829 STAT3P40763 770 aa12.21□□□□□ -0.45
RPAP1-212ENST00000569829 CDK7P50613 346 aa12.21□□□□□ -0.45
RPAP1-212ENST00000569829 RABGGTBP53611 331 aa12.21□□□□□ -0.45
RPAP1-212ENST00000569829 KCTD2Q14681 263 aa12.21□□□□□ -0.45
RPAP1-212ENST00000569829 TTF1Q15361 905 aaPredicted RBP12.21□□□□□ -0.45
RPAP1-212ENST00000569829 FAM83BQ5T0W9 1011 aa12.21□□□□□ -0.45
RPAP1-212ENST00000569829 SLC9C2Q5TAH2 1124 aa12.21□□□□□ -0.45
RPAP1-212ENST00000569829 ATXN2LQ8WWM7 1075 aaKnown RBP12.21□□□□□ -0.45
RPAP1-212ENST00000569829 TOX2Q96NM4 488 aa12.21□□□□□ -0.45
RPAP1-212ENST00000569829 APBB1O00213 710 aa12.2□□□□□ -0.46
RPAP1-212ENST00000569829 RFXAPO00287 272 aa12.2□□□□□ -0.46
RPAP1-212ENST00000569829 VWA5AO00534 786 aa12.2□□□□□ -0.46
RPAP1-212ENST00000569829 WDR46O15213 610 aaKnown RBP12.2□□□□□ -0.46
RPAP1-212ENST00000569829 SLC25A27O95847 323 aa12.2□□□□□ -0.46
RPAP1-212ENST00000569829 ASGR1P07306 291 aa12.2□□□□□ -0.46
RPAP1-212ENST00000569829 C6orf222P0C671 652 aaPredicted RBP12.2□□□□□ -0.46
RPAP1-212ENST00000569829 KCNQ1P51787 676 aa12.2□□□□□ -0.46
RPAP1-212ENST00000569829 STK11IPQ8N1F8 1099 aa12.2□□□□□ -0.46
RPAP1-212ENST00000569829 VTI1AQ96AJ9 217 aa12.2□□□□□ -0.46
RPAP1-212ENST00000569829 FGD4Q96M96 766 aa12.2□□□□□ -0.46
RPAP1-212ENST00000569829 CRNKL1Q9BZJ0 848 aaKnown RBP12.2□□□□□ -0.46
RPAP1-212ENST00000569829 ARHGEF10LQ9HCE6 1279 aa12.2□□□□□ -0.46
RPAP1-212ENST00000569829 PRRC2BQ5JSZ5 2229 aaKnown RBP12.19□□□□□ -0.46
RPAP1-212ENST00000569829 GOLIM4O00461 696 aa12.19□□□□□ -0.46
RPAP1-212ENST00000569829 CTAGE5O15320 804 aa12.19□□□□□ -0.46
RPAP1-212ENST00000569829 ATP5JP18859 108 aa12.19□□□□□ -0.46
RPAP1-212ENST00000569829 CDK8P49336 464 aa12.19□□□□□ -0.46
RPAP1-212ENST00000569829 MRPS5P82675 430 aaKnown RBP12.19□□□□□ -0.46
RPAP1-212ENST00000569829 BEX3Q00994 111 aa12.19□□□□□ -0.46
RPAP1-212ENST00000569829 AKNAD1Q5T1N1 836 aa12.19□□□□□ -0.46
RPAP1-212ENST00000569829 KRT40Q6A162 431 aa12.19□□□□□ -0.46
RPAP1-212ENST00000569829 OTOP2Q7RTS6 562 aa12.19□□□□□ -0.46
RPAP1-212ENST00000569829 FAM126BQ8IXS8 530 aa12.19□□□□□ -0.46
RPAP1-212ENST00000569829 FAM122AQ96E09 287 aa12.19□□□□□ -0.46
RPAP1-212ENST00000569829 DNAJC2Q99543 621 aaKnown RBP12.19□□□□□ -0.46
RPAP1-212ENST00000569829 TSEN34Q9BSV6 310 aaKnown RBP12.19□□□□□ -0.46
RPAP1-212ENST00000569829 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.19□□□□□ -0.46
RPAP1-212ENST00000569829 NRBP1Q9UHY1 535 aa12.19□□□□□ -0.46
RPAP1-212ENST00000569829 PPP1R9AQ9ULJ8 1098 aa12.19□□□□□ -0.46
RPAP1-212ENST00000569829 CNPY2Q9Y2B0 182 aa12.19□□□□□ -0.46
RPAP1-212ENST00000569829 ROBO3Q96MS0 1386 aa12.18□□□□□ -0.46
RPAP1-212ENST00000569829 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.18□□□□□ -0.46
RPAP1-212ENST00000569829 ARVCFO00192 962 aa12.18□□□□□ -0.46
RPAP1-212ENST00000569829 IFIT2P09913 472 aaKnown RBP12.18□□□□□ -0.46
RPAP1-212ENST00000569829 BMP1P13497 986 aa12.18□□□□□ -0.46
RPAP1-212ENST00000569829 CCL23P55773 120 aa12.18□□□□□ -0.46
RPAP1-212ENST00000569829 PPIGQ13427 754 aaKnown RBP eCLIP12.18□□□□□ -0.462e-6■■□□□ 11.9
RPAP1-212ENST00000569829 TMEM63BQ5T3F8 832 aa12.18□□□□□ -0.46
RPAP1-212ENST00000569829 CPXCR1Q8N123 301 aa12.18□□□□□ -0.46
RPAP1-212ENST00000569829 NUP133Q8WUM0 1156 aa12.18□□□□□ -0.46
RPAP1-212ENST00000569829 VWCEQ96DN2 955 aa12.18□□□□□ -0.46
RPAP1-212ENST00000569829 GLT1D1Q96MS3 346 aa12.18□□□□□ -0.46
RPAP1-212ENST00000569829 EPHX3Q9H6B9 360 aa12.18□□□□□ -0.46
RPAP1-212ENST00000569829 DCTPP1Q9H773 170 aa12.18□□□□□ -0.46
RPAP1-212ENST00000569829 CERS4Q9HA82 394 aa12.18□□□□□ -0.46
RPAP1-212ENST00000569829 FAM184BQ9ULE4 1060 aa12.18□□□□□ -0.46
RPAP1-212ENST00000569829 DIS3Q9Y2L1 958 aaKnown RBP12.18□□□□□ -0.46
RPAP1-212ENST00000569829 TRANK1O15050 2925 aa12.17□□□□□ -0.46
RPAP1-212ENST00000569829 ASTN1O14525 1302 aa12.17□□□□□ -0.46
RPAP1-212ENST00000569829 MOXD2PA6NHM9 499 aa12.17□□□□□ -0.46
RPAP1-212ENST00000569829 USP17L12C9JPN9 530 aa12.17□□□□□ -0.46
RPAP1-212ENST00000569829 USP17L21D6R901 530 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms