RNA–Protein interactions for RNA: ENST00000569768.1

THUMPD1-204, Transcript of THUMP domain containing 1, humanhuman

TSL 2

Gene THUMPD1, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-204ENST00000569768 TRIM29Q14134 588 aa17.05■□□□□ 0.32
THUMPD1-204ENST00000569768 FAM83BQ5T0W9 1011 aa17.05■□□□□ 0.32
THUMPD1-204ENST00000569768 IFFO2Q5TF58 517 aa17.05■□□□□ 0.32
THUMPD1-204ENST00000569768 TTBK2Q6IQ55 1244 aa17.05■□□□□ 0.32
THUMPD1-204ENST00000569768 PPP1R18Q6NYC8 613 aa17.05■□□□□ 0.32
THUMPD1-204ENST00000569768 MOB2Q70IA6 237 aa17.05■□□□□ 0.32
THUMPD1-204ENST00000569768 PRRT2Q7Z6L0 340 aaPredicted RBP17.05■□□□□ 0.32
THUMPD1-204ENST00000569768 SPICE1Q8N0Z3 855 aa17.05■□□□□ 0.32
THUMPD1-204ENST00000569768 CCDC148Q8NFR7 591 aa17.05■□□□□ 0.32
THUMPD1-204ENST00000569768 CCDC12Q8WUD4 166 aaPredicted RBP17.05■□□□□ 0.32
THUMPD1-204ENST00000569768 CLMNQ96JQ2 1002 aa17.05■□□□□ 0.32
THUMPD1-204ENST00000569768 UBA5Q9GZZ9 404 aa17.05■□□□□ 0.32
THUMPD1-204ENST00000569768 RAD21O60216 631 aa17.04■□□□□ 0.32
THUMPD1-204ENST00000569768 TOMM70O94826 608 aa17.04■□□□□ 0.32
THUMPD1-204ENST00000569768 PKP1Q13835 747 aa17.04■□□□□ 0.32
THUMPD1-204ENST00000569768 ZYXQ15942 572 aaKnown RBP17.04■□□□□ 0.32
THUMPD1-204ENST00000569768 CST9Q5W186 159 aa17.04■□□□□ 0.32
THUMPD1-204ENST00000569768 KRT40Q6A162 431 aa17.04■□□□□ 0.32
THUMPD1-204ENST00000569768 GALNT17Q6IS24 598 aa17.04■□□□□ 0.32
THUMPD1-204ENST00000569768 CLEC17AQ6ZS10 378 aa17.04■□□□□ 0.32
THUMPD1-204ENST00000569768 SLC10A4Q96EP9 437 aa17.04■□□□□ 0.32
THUMPD1-204ENST00000569768 NUP88Q99567 741 aaPredicted RBP17.04■□□□□ 0.32
THUMPD1-204ENST00000569768 ZSCAN16Q9H4T2 348 aaPredicted RBP17.04■□□□□ 0.32
THUMPD1-204ENST00000569768 ZNF408Q9H9D4 720 aa17.04■□□□□ 0.32
THUMPD1-204ENST00000569768 BARHL2Q9NY43 387 aa17.04■□□□□ 0.32
THUMPD1-204ENST00000569768 PNMA2Q9UL42 364 aa17.04■□□□□ 0.32
THUMPD1-204ENST00000569768 ATP6V1DQ9Y5K8 247 aa17.04■□□□□ 0.32
THUMPD1-204ENST00000569768 ESYT2A0FGR8 921 aa17.03■□□□□ 0.32
THUMPD1-204ENST00000569768 VPS37CA5D8V6 355 aaPredicted RBP17.03■□□□□ 0.32
THUMPD1-204ENST00000569768 IRF6O14896 467 aa17.03■□□□□ 0.32
THUMPD1-204ENST00000569768 F13A1P00488 732 aa17.03■□□□□ 0.32
THUMPD1-204ENST00000569768 MMP1P03956 469 aa17.03■□□□□ 0.32
THUMPD1-204ENST00000569768 ZBTB48P10074 688 aaPredicted RBP17.03■□□□□ 0.32
THUMPD1-204ENST00000569768 HMGCS2P54868 508 aa17.03■□□□□ 0.32
THUMPD1-204ENST00000569768 FMR1Q06787 632 aaKnown RBP eCLIP17.03■□□□□ 0.32
THUMPD1-204ENST00000569768 FSTL1Q12841 308 aa17.03■□□□□ 0.32
THUMPD1-204ENST00000569768 PRPF38AQ8NAV1 312 aaKnown RBP17.03■□□□□ 0.32
THUMPD1-204ENST00000569768 OPTNQ96CV9 577 aa17.03■□□□□ 0.32
THUMPD1-204ENST00000569768 OTUD5Q96G74 571 aa17.03■□□□□ 0.32
THUMPD1-204ENST00000569768 AIFM3Q96NN9 605 aa17.03■□□□□ 0.32
THUMPD1-204ENST00000569768 PIGSQ96S52 555 aa17.03■□□□□ 0.32
THUMPD1-204ENST00000569768 PHF20Q9BVI0 1012 aa17.03■□□□□ 0.32
THUMPD1-204ENST00000569768 RANBP17Q9H2T7 1088 aaKnown RBP17.03■□□□□ 0.32
THUMPD1-204ENST00000569768 PRR12Q9ULL5 1215 aa17.03■□□□□ 0.32
THUMPD1-204ENST00000569768 PPFIA3O75145 1194 aa17.02■□□□□ 0.32
THUMPD1-204ENST00000569768 CALML3P27482 149 aa17.02■□□□□ 0.32
THUMPD1-204ENST00000569768 SLC16A2P36021 539 aa17.02■□□□□ 0.32
THUMPD1-204ENST00000569768 CDC37Q16543 378 aaPredicted RBP17.02■□□□□ 0.32
THUMPD1-204ENST00000569768 DAGLBQ8NCG7 672 aa17.02■□□□□ 0.32
THUMPD1-204ENST00000569768 SLF1Q9BQI6 1058 aa17.02■□□□□ 0.32
THUMPD1-204ENST00000569768 CPVLQ9H3G5 476 aa17.02■□□□□ 0.32
THUMPD1-204ENST00000569768 RPAP3Q9H6T3 665 aaPredicted RBP17.02■□□□□ 0.32
THUMPD1-204ENST00000569768 PPP1R9AQ9ULJ8 1098 aa17.02■□□□□ 0.32
THUMPD1-204ENST00000569768 USP17L15C9J2P7 530 aa17.01■□□□□ 0.31
THUMPD1-204ENST00000569768 USP17L13C9JLJ4 530 aa17.01■□□□□ 0.31
THUMPD1-204ENST00000569768 USP17L11C9JVI0 530 aa17.01■□□□□ 0.31
THUMPD1-204ENST00000569768 USP17L18D6R9N7 530 aa17.01■□□□□ 0.31
THUMPD1-204ENST00000569768 USP17L22D6RA61 530 aa17.01■□□□□ 0.31
THUMPD1-204ENST00000569768 USP17L17D6RBQ6 530 aa17.01■□□□□ 0.31
THUMPD1-204ENST00000569768 USP17L19D6RCP7 530 aa17.01■□□□□ 0.31
THUMPD1-204ENST00000569768 USP17L20D6RJB6 530 aa17.01■□□□□ 0.31
THUMPD1-204ENST00000569768 STXBP3O00186 592 aa17.01■□□□□ 0.31
THUMPD1-204ENST00000569768 DTNBO60941 627 aa17.01■□□□□ 0.31
THUMPD1-204ENST00000569768 HOXA7P31268 230 aaPredicted RBP17.01■□□□□ 0.31
THUMPD1-204ENST00000569768 USP17L24Q0WX57 530 aa17.01■□□□□ 0.31
THUMPD1-204ENST00000569768 IKQ13123 557 aaPredicted RBP17.01■□□□□ 0.31
THUMPD1-204ENST00000569768 SNAPC2Q13487 334 aa17.01■□□□□ 0.31
THUMPD1-204ENST00000569768 SAFBQ15424 915 aaKnown RBP eCLIP17.01■□□□□ 0.31
THUMPD1-204ENST00000569768 QRICH1Q2TAL8 776 aa17.01■□□□□ 0.31
THUMPD1-204ENST00000569768 WWC2Q6AWC2 1192 aa17.01■□□□□ 0.31
THUMPD1-204ENST00000569768 CATSPERGQ6ZRH7 1159 aa17.01■□□□□ 0.31
THUMPD1-204ENST00000569768 FASTKD5Q7L8L6 764 aaKnown RBP17.01■□□□□ 0.31
THUMPD1-204ENST00000569768 BRAPQ7Z569 592 aa17.01■□□□□ 0.31
THUMPD1-204ENST00000569768 WNK4Q96J92 1243 aa17.01■□□□□ 0.31
THUMPD1-204ENST00000569768 HHIPL1Q96JK4 782 aa17.01■□□□□ 0.31
THUMPD1-204ENST00000569768 GLT8D2Q9H1C3 349 aa17.01■□□□□ 0.31
THUMPD1-204ENST00000569768 FOXP1Q9H334 677 aaPredicted RBP17.01■□□□□ 0.31
THUMPD1-204ENST00000569768 ISY1Q9ULR0 285 aaKnown RBP17.01■□□□□ 0.31
THUMPD1-204ENST00000569768 ADAMTS5Q9UNA0 930 aa17.01■□□□□ 0.31
THUMPD1-204ENST00000569768 PARP14Q460N5 1801 aa17■□□□□ 0.31
THUMPD1-204ENST00000569768 U2AF2P26368 475 aaKnown RBP eCLIP17■□□□□ 0.31
THUMPD1-204ENST00000569768 KIF23Q02241 960 aaPredicted RBP17■□□□□ 0.31
THUMPD1-204ENST00000569768 RESTQ13127 1097 aa17■□□□□ 0.31
THUMPD1-204ENST00000569768 HOMER1Q86YM7 354 aa17■□□□□ 0.31
THUMPD1-204ENST00000569768 CNKSR2Q8WXI2 1034 aa17■□□□□ 0.31
THUMPD1-204ENST00000569768 TNPO1Q92973 898 aaKnown RBP17■□□□□ 0.31
THUMPD1-204ENST00000569768 SHISA4Q96DD7 197 aa17■□□□□ 0.31
THUMPD1-204ENST00000569768 AMNQ9BXJ7 453 aa17■□□□□ 0.31
THUMPD1-204ENST00000569768 ZMYND12Q9H0C1 365 aa17■□□□□ 0.31
THUMPD1-204ENST00000569768 VAT1LQ9HCJ6 419 aa17■□□□□ 0.31
THUMPD1-204ENST00000569768 BRMS1Q9HCU9 246 aa17■□□□□ 0.31
THUMPD1-204ENST00000569768 VPS54Q9P1Q0 977 aa17■□□□□ 0.31
THUMPD1-204ENST00000569768 BAZ2BQ9UIF8 2168 aaKnown RBP17■□□□□ 0.31
THUMPD1-204ENST00000569768 hCG_1642624A0A1W2PR95 340 aa16.99■□□□□ 0.31
THUMPD1-204ENST00000569768 GNA11P29992 359 aa16.99■□□□□ 0.31
THUMPD1-204ENST00000569768 GJA5P36382 358 aa16.99■□□□□ 0.31
THUMPD1-204ENST00000569768 GTF2A2P52657 109 aa16.99■□□□□ 0.31
THUMPD1-204ENST00000569768 OAZ1P54368 228 aa16.99■□□□□ 0.31
THUMPD1-204ENST00000569768 PABPC4Q13310 644 aaKnown RBP eCLIP16.99■□□□□ 0.31
THUMPD1-204ENST00000569768 MOGSQ13724 837 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms