RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 ACTN1P12814 892 aa8.31□□□□□ -1.08
HERPUD1-217ENST00000569429 TAL1P17542 331 aaPredicted RBP8.31□□□□□ -1.08
HERPUD1-217ENST00000569429 ERCC3P19447 782 aa8.31□□□□□ -1.08
HERPUD1-217ENST00000569429 FGFR2P21802 821 aa8.31□□□□□ -1.08
HERPUD1-217ENST00000569429 RHBDL3P58872 404 aa8.31□□□□□ -1.08
HERPUD1-217ENST00000569429 ERVK-21P61565 698 aa8.31□□□□□ -1.08
HERPUD1-217ENST00000569429 JAG1P78504 1218 aa8.31□□□□□ -1.08
HERPUD1-217ENST00000569429 NEUROD2Q15784 382 aa8.31□□□□□ -1.08
HERPUD1-217ENST00000569429 ASIC4Q96FT7 647 aa8.31□□□□□ -1.08
HERPUD1-217ENST00000569429 SEZ6LQ9BYH1 1024 aa8.31□□□□□ -1.08
HERPUD1-217ENST00000569429 DIS3Q9Y2L1 958 aaKnown RBP8.31□□□□□ -1.08
HERPUD1-217ENST00000569429 PARP14Q460N5 1801 aa8.31□□□□□ -1.08
HERPUD1-217ENST00000569429 MICAL3Q7RTP6 2002 aa8.3□□□□□ -1.08
HERPUD1-217ENST00000569429 FANCMQ8IYD8 2048 aa8.3□□□□□ -1.08
HERPUD1-217ENST00000569429 NLRC5Q86WI3 1866 aa8.3□□□□□ -1.08
HERPUD1-217ENST00000569429 TANC1Q9C0D5 1861 aa8.3□□□□□ -1.08
HERPUD1-217ENST00000569429 KDM4AO75164 1064 aa8.3□□□□□ -1.08
HERPUD1-217ENST00000569429 BTDP43251 543 aa8.3□□□□□ -1.08
HERPUD1-217ENST00000569429 METTL24Q5JXM2 366 aa8.3□□□□□ -1.08
HERPUD1-217ENST00000569429 SLF2Q8IX21 1173 aa8.3□□□□□ -1.08
HERPUD1-217ENST00000569429 C8orf58Q8NAV2 365 aa8.3□□□□□ -1.08
HERPUD1-217ENST00000569429 DNAAF4Q8WXU2 420 aa8.3□□□□□ -1.08
HERPUD1-217ENST00000569429 SCLYQ96I15 445 aa8.3□□□□□ -1.08
HERPUD1-217ENST00000569429 TGS1Q96RS0 853 aaKnown RBP8.3□□□□□ -1.08
HERPUD1-217ENST00000569429 SPATC1LQ9H0A9 340 aa8.3□□□□□ -1.08
HERPUD1-217ENST00000569429 MROH8Q9H579 483 aa8.3□□□□□ -1.08
HERPUD1-217ENST00000569429 PI4KBQ9UBF8 816 aa8.3□□□□□ -1.08
HERPUD1-217ENST00000569429 CTNNA3Q9UI47 895 aa8.3□□□□□ -1.08
HERPUD1-217ENST00000569429 FAM184BQ9ULE4 1060 aa8.3□□□□□ -1.08
HERPUD1-217ENST00000569429 FOCADQ5VW36 1801 aa8.29□□□□□ -1.08
HERPUD1-217ENST00000569429 GPR75-ASB3A0A0A6YYF3 556 aa8.29□□□□□ -1.08
HERPUD1-217ENST00000569429 LCHNA4D1U4 455 aa8.29□□□□□ -1.08
HERPUD1-217ENST00000569429 MAP4K4O95819 1239 aaPredicted RBP8.29□□□□□ -1.08
HERPUD1-217ENST00000569429 C6orf222P0C671 652 aaPredicted RBP8.29□□□□□ -1.08
HERPUD1-217ENST00000569429 GJA9P57773 515 aa8.29□□□□□ -1.08
HERPUD1-217ENST00000569429 G2E3Q7L622 706 aa8.29□□□□□ -1.08
HERPUD1-217ENST00000569429 FRMD5Q7Z6J6 570 aa8.29□□□□□ -1.08
HERPUD1-217ENST00000569429 METTL16Q86W50 562 aaKnown RBP8.29□□□□□ -1.08
HERPUD1-217ENST00000569429 UPF3AQ9H1J1 476 aaKnown RBP8.29□□□□□ -1.08
HERPUD1-217ENST00000569429 RALYQ9UKM9 306 aaKnown RBP8.29□□□□□ -1.08
HERPUD1-217ENST00000569429 ZBTB21Q9ULJ3 1066 aa8.29□□□□□ -1.08
HERPUD1-217ENST00000569429 TNKSO95271 1327 aa8.29□□□□□ -1.08
HERPUD1-217ENST00000569429 GCN1Q92616 2671 aaKnown RBP8.28□□□□□ -1.08
HERPUD1-217ENST00000569429 MBTPS2O43462 519 aa8.28□□□□□ -1.08
HERPUD1-217ENST00000569429 NCK2O43639 380 aa8.28□□□□□ -1.08
HERPUD1-217ENST00000569429 FCER1AP12319 257 aa8.28□□□□□ -1.08
HERPUD1-217ENST00000569429 VCAM1P19320 739 aa8.28□□□□□ -1.08
HERPUD1-217ENST00000569429 USP14P54578 494 aa8.28□□□□□ -1.08
HERPUD1-217ENST00000569429 NKX3-2P78367 333 aa8.28□□□□□ -1.08
HERPUD1-217ENST00000569429 PUM3Q15397 648 aaKnown RBP8.28□□□□□ -1.08
HERPUD1-217ENST00000569429 LRRC24Q50LG9 513 aa8.28□□□□□ -1.08
HERPUD1-217ENST00000569429 TIGD5Q53EQ6 642 aa8.28□□□□□ -1.08
HERPUD1-217ENST00000569429 ZGPATQ8N5A5 531 aaKnown RBP8.28□□□□□ -1.08
HERPUD1-217ENST00000569429 MRPL38Q96DV4 380 aaKnown RBP8.28□□□□□ -1.08
HERPUD1-217ENST00000569429 STK31Q9BXU1 1019 aa8.28□□□□□ -1.08
HERPUD1-217ENST00000569429 SPC25Q9HBM1 224 aa8.28□□□□□ -1.08
HERPUD1-217ENST00000569429 CNPY2Q9Y2B0 182 aa8.28□□□□□ -1.08
HERPUD1-217ENST00000569429 MROH7-TTC4A0A0A0MT08 1334 aa8.28□□□□□ -1.08
HERPUD1-217ENST00000569429 STXBP3O00186 592 aa8.27□□□□□ -1.09
HERPUD1-217ENST00000569429 B4GALT4O60513 344 aa8.27□□□□□ -1.09
HERPUD1-217ENST00000569429 BAIAP3O94812 1187 aa8.27□□□□□ -1.09
HERPUD1-217ENST00000569429 HOXB3P14651 431 aaPredicted RBP8.27□□□□□ -1.09
HERPUD1-217ENST00000569429 RFC2P35250 354 aa8.27□□□□□ -1.09
HERPUD1-217ENST00000569429 LTBRP36941 435 aa8.27□□□□□ -1.09
HERPUD1-217ENST00000569429 IRX5P78411 483 aaPredicted RBP8.27□□□□□ -1.09
HERPUD1-217ENST00000569429 CBX2Q14781 532 aaPredicted RBP8.27□□□□□ -1.09
HERPUD1-217ENST00000569429 PTPROQ16827 1216 aa8.27□□□□□ -1.09
HERPUD1-217ENST00000569429 SHROOM1Q2M3G4 852 aaPredicted RBP8.27□□□□□ -1.09
HERPUD1-217ENST00000569429 ZNF792Q3KQV3 632 aa8.27□□□□□ -1.09
HERPUD1-217ENST00000569429 GNASQ5JWF2 1037 aa8.27□□□□□ -1.09
HERPUD1-217ENST00000569429 DEFB128Q7Z7B8 93 aa8.27□□□□□ -1.09
HERPUD1-217ENST00000569429 FOXP4Q8IVH2 680 aaPredicted RBP8.27□□□□□ -1.09
HERPUD1-217ENST00000569429 MSL3Q8N5Y2 521 aaKnown RBP8.27□□□□□ -1.09
HERPUD1-217ENST00000569429 CDCA7LQ96GN5 454 aa8.27□□□□□ -1.09
HERPUD1-217ENST00000569429 KIAA1683Q9H0B3 1180 aa8.27□□□□□ -1.09
HERPUD1-217ENST00000569429 DHX36Q9H2U1 1008 aaKnown RBP8.27□□□□□ -1.09
HERPUD1-217ENST00000569429 DNAJC18Q9H819 358 aa8.27□□□□□ -1.09
HERPUD1-217ENST00000569429 IFT57Q9NWB7 429 aa8.27□□□□□ -1.09
HERPUD1-217ENST00000569429 HOXC10Q9NYD6 342 aa8.27□□□□□ -1.09
HERPUD1-217ENST00000569429 DENND2AQ9ULE3 1009 aa8.27□□□□□ -1.09
HERPUD1-217ENST00000569429 RALGAPA2Q2PPJ7 1873 aa8.27□□□□□ -1.09
HERPUD1-217ENST00000569429 ZZEF1O43149 2961 aa8.27□□□□□ -1.09
HERPUD1-217ENST00000569429 SEMA3EO15041 775 aa8.26□□□□□ -1.09
HERPUD1-217ENST00000569429 CTAGE5O15320 804 aa8.26□□□□□ -1.09
HERPUD1-217ENST00000569429 CABYRO75952 493 aa8.26□□□□□ -1.09
HERPUD1-217ENST00000569429 GDF11O95390 407 aa8.26□□□□□ -1.09
HERPUD1-217ENST00000569429 GNAI1P63096 354 aa8.26□□□□□ -1.09
HERPUD1-217ENST00000569429 SMAD4Q13485 552 aaKnown RBP8.26□□□□□ -1.09
HERPUD1-217ENST00000569429 ITGA7Q13683 1181 aa8.26□□□□□ -1.09
HERPUD1-217ENST00000569429 COG2Q14746 738 aa8.26□□□□□ -1.09
HERPUD1-217ENST00000569429 ZYXQ15942 572 aaKnown RBP8.26□□□□□ -1.09
HERPUD1-217ENST00000569429 CTC1Q2NKJ3 1217 aa8.26□□□□□ -1.09
HERPUD1-217ENST00000569429 TCEAL5Q5H9L2 206 aa8.26□□□□□ -1.09
HERPUD1-217ENST00000569429 EP400NLQ6ZTU2 488 aa8.26□□□□□ -1.09
HERPUD1-217ENST00000569429 NCAPG2Q86XI2 1143 aa8.26□□□□□ -1.09
HERPUD1-217ENST00000569429 DZIP1Q86YF9 867 aaKnown RBP8.26□□□□□ -1.09
HERPUD1-217ENST00000569429 MB21D1Q8N884 522 aa8.26□□□□□ -1.09
HERPUD1-217ENST00000569429 BANK1Q8NDB2 785 aa8.26□□□□□ -1.09
HERPUD1-217ENST00000569429 LPIN2Q92539 896 aa8.26□□□□□ -1.09
HERPUD1-217ENST00000569429 RIPOR3Q96MK2 946 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms