RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 ICA1Q05084 483 aa13.47□□□□□ -0.25
CHRFAM7A-206ENST00000569278 C1orf53Q5VUE5 145 aa13.47□□□□□ -0.25
CHRFAM7A-206ENST00000569278 ERC1Q8IUD2 1116 aa13.47□□□□□ -0.25
CHRFAM7A-206ENST00000569278 ABRAQ8N0Z2 381 aa13.47□□□□□ -0.25
CHRFAM7A-206ENST00000569278 BADQ92934 168 aa13.47□□□□□ -0.25
CHRFAM7A-206ENST00000569278 DNAJC2Q99543 621 aaKnown RBP13.47□□□□□ -0.25
CHRFAM7A-206ENST00000569278 DDX19BQ9UMR2 479 aa13.47□□□□□ -0.25
CHRFAM7A-206ENST00000569278 STRNO43815 780 aa13.46□□□□□ -0.25
CHRFAM7A-206ENST00000569278 PPP1R37O75864 691 aa13.46□□□□□ -0.25
CHRFAM7A-206ENST00000569278 FLOT1O75955 427 aa13.46□□□□□ -0.25
CHRFAM7A-206ENST00000569278 PGK2P07205 417 aa13.46□□□□□ -0.25
CHRFAM7A-206ENST00000569278 ADCYAP1R1P41586 468 aa13.46□□□□□ -0.25
CHRFAM7A-206ENST00000569278 DPP9Q86TI2 863 aa13.46□□□□□ -0.25
CHRFAM7A-206ENST00000569278 MB21D1Q8N884 522 aa13.46□□□□□ -0.25
CHRFAM7A-206ENST00000569278 FERMT2Q96AC1 680 aa13.46□□□□□ -0.25
CHRFAM7A-206ENST00000569278 CDX2Q99626 313 aaPredicted RBP13.46□□□□□ -0.25
CHRFAM7A-206ENST00000569278 LBHD1Q9BQE6 289 aaPredicted RBP13.46□□□□□ -0.25
CHRFAM7A-206ENST00000569278 ZNF214Q9UL59 606 aaPredicted RBP13.46□□□□□ -0.25
CHRFAM7A-206ENST00000569278 PHF24Q9UPV7 400 aa13.46□□□□□ -0.25
CHRFAM7A-206ENST00000569278 LRRC37A2A6NM11 1700 aa13.46□□□□□ -0.25
CHRFAM7A-206ENST00000569278 TTC28Q96AY4 2481 aa13.46□□□□□ -0.26
CHRFAM7A-206ENST00000569278 WDR46O15213 610 aaKnown RBP13.45□□□□□ -0.26
CHRFAM7A-206ENST00000569278 ZNF865P0CJ78 1059 aaPredicted RBP13.45□□□□□ -0.26
CHRFAM7A-206ENST00000569278 TTF1Q15361 905 aaPredicted RBP13.45□□□□□ -0.26
CHRFAM7A-206ENST00000569278 ZNF792Q3KQV3 632 aa13.45□□□□□ -0.26
CHRFAM7A-206ENST00000569278 C12orf60Q5U649 245 aa13.45□□□□□ -0.26
CHRFAM7A-206ENST00000569278 C16orf86Q6ZW13 317 aa13.45□□□□□ -0.26
CHRFAM7A-206ENST00000569278 NCAPG2Q86XI2 1143 aa13.45□□□□□ -0.26
CHRFAM7A-206ENST00000569278 MROH8Q9H579 483 aa13.45□□□□□ -0.26
CHRFAM7A-206ENST00000569278 PRDM5Q9NQX1 630 aaPredicted RBP13.45□□□□□ -0.26
CHRFAM7A-206ENST00000569278 HOXC10Q9NYD6 342 aa13.45□□□□□ -0.26
CHRFAM7A-206ENST00000569278 SWAP70Q9UH65 585 aa13.45□□□□□ -0.26
CHRFAM7A-206ENST00000569278 MCM3APO60318 1980 aa13.45□□□□□ -0.26
CHRFAM7A-206ENST00000569278 KBTBD13C9JR72 458 aa13.44□□□□□ -0.26
CHRFAM7A-206ENST00000569278 APBB1O00213 710 aa13.44□□□□□ -0.26
CHRFAM7A-206ENST00000569278 ADCY6O43306 1168 aa13.44□□□□□ -0.26
CHRFAM7A-206ENST00000569278 ADAMTS4O75173 837 aa13.44□□□□□ -0.26
CHRFAM7A-206ENST00000569278 EEF2P13639 858 aaKnown RBP13.44□□□□□ -0.26
CHRFAM7A-206ENST00000569278 CDK8P49336 464 aa13.44□□□□□ -0.26
CHRFAM7A-206ENST00000569278 TLE2Q04725 743 aa13.44□□□□□ -0.26
CHRFAM7A-206ENST00000569278 PLS1Q14651 629 aa13.44□□□□□ -0.26
CHRFAM7A-206ENST00000569278 ZNF697Q5TEC3 545 aa13.44□□□□□ -0.26
CHRFAM7A-206ENST00000569278 SPRYD3Q8NCJ5 442 aa13.44□□□□□ -0.26
CHRFAM7A-206ENST00000569278 ARRDC4Q8NCT1 418 aa13.44□□□□□ -0.26
CHRFAM7A-206ENST00000569278 FGD4Q96M96 766 aa13.44□□□□□ -0.26
CHRFAM7A-206ENST00000569278 SEMA6BQ9H3T3 888 aa13.44□□□□□ -0.26
CHRFAM7A-206ENST00000569278 RWDD1Q9H446 243 aaPredicted RBP13.44□□□□□ -0.26
CHRFAM7A-206ENST00000569278 RYDENQ9NUL5 291 aaKnown RBP13.44□□□□□ -0.26
CHRFAM7A-206ENST00000569278 PGK1P00558 417 aa13.43□□□□□ -0.26
CHRFAM7A-206ENST00000569278 RIOX2Q8IUF8 465 aa13.43□□□□□ -0.26
CHRFAM7A-206ENST00000569278 KIF1BPQ96EK5 621 aa13.43□□□□□ -0.26
CHRFAM7A-206ENST00000569278 HAUS7Q99871 368 aa13.43□□□□□ -0.26
CHRFAM7A-206ENST00000569278 BOLA2Q9H3K6 86 aa13.43□□□□□ -0.26
CHRFAM7A-206ENST00000569278 ZBTB40Q9NUA8 1239 aa13.43□□□□□ -0.26
CHRFAM7A-206ENST00000569278 PAG1Q9NWQ8 432 aa13.43□□□□□ -0.26
CHRFAM7A-206ENST00000569278 PPP1R9AQ9ULJ8 1098 aa13.43□□□□□ -0.26
CHRFAM7A-206ENST00000569278 MYH4Q9Y623 1939 aa13.43□□□□□ -0.26
CHRFAM7A-206ENST00000569278 A0A1W2PQ45 241 aaPredicted RBP13.42□□□□□ -0.26
CHRFAM7A-206ENST00000569278 A0A1W2PQY0 241 aa13.42□□□□□ -0.26
CHRFAM7A-206ENST00000569278 MYADML2A6NDP7 307 aa13.42□□□□□ -0.26
CHRFAM7A-206ENST00000569278 USP17L12C9JPN9 530 aa13.42□□□□□ -0.26
CHRFAM7A-206ENST00000569278 USP17L21D6R901 530 aa13.42□□□□□ -0.26
CHRFAM7A-206ENST00000569278 VWA5AO00534 786 aa13.42□□□□□ -0.26
CHRFAM7A-206ENST00000569278 SMAD3P84022 425 aaKnown RBP13.42□□□□□ -0.26
CHRFAM7A-206ENST00000569278 C20orf194Q5TEA3 1177 aa13.42□□□□□ -0.26
CHRFAM7A-206ENST00000569278 CCSAPQ6IQ19 270 aaPredicted RBP13.42□□□□□ -0.26
CHRFAM7A-206ENST00000569278 CTR9Q6PD62 1173 aa13.42□□□□□ -0.26
CHRFAM7A-206ENST00000569278 MYLIPQ8WY64 445 aa13.42□□□□□ -0.26
CHRFAM7A-206ENST00000569278 NUP88Q99567 741 aaPredicted RBP13.42□□□□□ -0.26
CHRFAM7A-206ENST00000569278 TINF2Q9BSI4 451 aa13.42□□□□□ -0.26
CHRFAM7A-206ENST00000569278 PUS7LQ9H0K6 701 aaKnown RBP13.42□□□□□ -0.26
CHRFAM7A-206ENST00000569278 ARHGEF10LQ9HCE6 1279 aa13.42□□□□□ -0.26
CHRFAM7A-206ENST00000569278 XPNPEP3Q9NQH7 507 aa13.42□□□□□ -0.26
CHRFAM7A-206ENST00000569278 ATP8A2Q9NTI2 1148 aa13.42□□□□□ -0.26
CHRFAM7A-206ENST00000569278 NRBP1Q9UHY1 535 aa13.42□□□□□ -0.26
CHRFAM7A-206ENST00000569278 RIPK3Q9Y572 518 aa13.42□□□□□ -0.26
CHRFAM7A-206ENST00000569278 LCTP09848 1927 aa13.42□□□□□ -0.26
CHRFAM7A-206ENST00000569278 SYNRGQ9UMZ2 1314 aa13.41□□□□□ -0.26
CHRFAM7A-206ENST00000569278 DNAJC25-GNG10A0A024R161 153 aa13.41□□□□□ -0.26
CHRFAM7A-206ENST00000569278 KIAA0355O15063 1070 aa13.41□□□□□ -0.26
CHRFAM7A-206ENST00000569278 FCER1AP12319 257 aa13.41□□□□□ -0.26
CHRFAM7A-206ENST00000569278 ATP5JP18859 108 aa13.41□□□□□ -0.26
CHRFAM7A-206ENST00000569278 FAM83BQ5T0W9 1011 aa13.41□□□□□ -0.26
CHRFAM7A-206ENST00000569278 CLASRPQ8N2M8 674 aaKnown RBP13.41□□□□□ -0.26
CHRFAM7A-206ENST00000569278 USP38Q8NB14 1042 aa13.41□□□□□ -0.26
CHRFAM7A-206ENST00000569278 MMP19Q99542 508 aa13.41□□□□□ -0.26
CHRFAM7A-206ENST00000569278 PRKAG2Q9UGJ0 569 aa13.41□□□□□ -0.26
CHRFAM7A-206ENST00000569278 RBM19Q9Y4C8 960 aaKnown RBP13.41□□□□□ -0.26
CHRFAM7A-206ENST00000569278 IGKV6D-41A0A0C4DH26 115 aa13.4□□□□□ -0.26
CHRFAM7A-206ENST00000569278 SLC25A27O95847 323 aa13.4□□□□□ -0.26
CHRFAM7A-206ENST00000569278 SNAI1O95863 264 aaPredicted RBP13.4□□□□□ -0.26
CHRFAM7A-206ENST00000569278 CLTBP09497 229 aa13.4□□□□□ -0.26
CHRFAM7A-206ENST00000569278 RASA1P20936 1047 aa13.4□□□□□ -0.26
CHRFAM7A-206ENST00000569278 FAAP100Q0VG06 881 aa13.4□□□□□ -0.26
CHRFAM7A-206ENST00000569278 UBE3CQ15386 1083 aa13.4□□□□□ -0.26
CHRFAM7A-206ENST00000569278 HSP90AB4PQ58FF6 505 aa13.4□□□□□ -0.26
CHRFAM7A-206ENST00000569278 KLHDC9Q8NEP7 349 aa13.4□□□□□ -0.26
CHRFAM7A-206ENST00000569278 MAFAQ8NHW3 353 aaPredicted RBP13.4□□□□□ -0.26
CHRFAM7A-206ENST00000569278 CCDC17Q96LX7 622 aa13.4□□□□□ -0.26
CHRFAM7A-206ENST00000569278 EPB41L4AQ9HCS5 686 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms