RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 ANKRD13CQ8N6S4 541 aa10.63□□□□□ -0.71
CHD9-219ENST00000569225 ATG4CQ96DT6 458 aa10.63□□□□□ -0.71
CHD9-219ENST00000569225 TBC1D32Q96NH3 1257 aa10.63□□□□□ -0.71
CHD9-219ENST00000569225 LZTS2Q9BRK4 669 aa10.63□□□□□ -0.71
CHD9-219ENST00000569225 PAGR1Q9BTK6 254 aa10.63□□□□□ -0.71
CHD9-219ENST00000569225 MORF4L1Q9UBU8 362 aa10.63□□□□□ -0.71
CHD9-219ENST00000569225 PNMA2Q9UL42 364 aa10.63□□□□□ -0.71
CHD9-219ENST00000569225 NAP1L2Q9ULW6 460 aaPredicted RBP10.63□□□□□ -0.71
CHD9-219ENST00000569225 GOLGA8BA8MQT2 603 aa10.62□□□□□ -0.71
CHD9-219ENST00000569225 VWA5AO00534 786 aa10.62□□□□□ -0.71
CHD9-219ENST00000569225 FOXN1O15353 648 aa10.62□□□□□ -0.71
CHD9-219ENST00000569225 FKTNO75072 461 aa10.62□□□□□ -0.71
CHD9-219ENST00000569225 GOLGA8HP0CJ92 632 aa10.62□□□□□ -0.71
CHD9-219ENST00000569225 BCRP11274 1271 aa10.62□□□□□ -0.71
CHD9-219ENST00000569225 NEK4P51957 841 aa10.62□□□□□ -0.71
CHD9-219ENST00000569225 SP3Q02447 781 aa10.62□□□□□ -0.71
CHD9-219ENST00000569225 PPP2R5BQ15173 497 aa10.62□□□□□ -0.71
CHD9-219ENST00000569225 RABEP1Q15276 862 aa10.62□□□□□ -0.71
CHD9-219ENST00000569225 APOA5Q6Q788 366 aa10.62□□□□□ -0.71
CHD9-219ENST00000569225 MICU3Q86XE3 530 aa10.62□□□□□ -0.71
CHD9-219ENST00000569225 ERO1AQ96HE7 468 aa10.62□□□□□ -0.71
CHD9-219ENST00000569225 AGXT2Q9BYV1 514 aa10.62□□□□□ -0.71
CHD9-219ENST00000569225 ALDH8A1Q9H2A2 487 aaPredicted RBP10.62□□□□□ -0.71
CHD9-219ENST00000569225 RBPJLQ9UBG7 517 aa10.62□□□□□ -0.71
CHD9-219ENST00000569225 TSKSQ9UJT2 592 aa10.62□□□□□ -0.71
CHD9-219ENST00000569225 ADAMTS5Q9UNA0 930 aa10.62□□□□□ -0.71
CHD9-219ENST00000569225 CCDC196A0A1B0GTZ2 297 aa10.61□□□□□ -0.71
CHD9-219ENST00000569225 PALM3A6NDB9 673 aaPredicted RBP10.61□□□□□ -0.71
CHD9-219ENST00000569225 KLRF2D3W0D1 207 aa10.61□□□□□ -0.71
CHD9-219ENST00000569225 DHX16O60231 1041 aaKnown RBP10.61□□□□□ -0.71
CHD9-219ENST00000569225 HSPA8P11142 646 aaKnown RBP10.61□□□□□ -0.71
CHD9-219ENST00000569225 COPB2P35606 906 aa10.61□□□□□ -0.71
CHD9-219ENST00000569225 OAZ1P54368 228 aa10.61□□□□□ -0.71
CHD9-219ENST00000569225 ERVK-9P63128 1117 aa10.61□□□□□ -0.71
CHD9-219ENST00000569225 ERVK-24P63145 666 aa10.61□□□□□ -0.71
CHD9-219ENST00000569225 RASGRP2Q7LDG7 609 aa10.61□□□□□ -0.71
CHD9-219ENST00000569225 FANCBQ8NB91 859 aa10.61□□□□□ -0.71
CHD9-219ENST00000569225 MYL10Q9BUA6 226 aa10.61□□□□□ -0.71
CHD9-219ENST00000569225 R3HDMLQ9H3Y0 253 aa10.61□□□□□ -0.71
CHD9-219ENST00000569225 SLC38A10Q9HBR0 1119 aa10.61□□□□□ -0.71
CHD9-219ENST00000569225 CWC22Q9HCG8 908 aaKnown RBP10.61□□□□□ -0.71
CHD9-219ENST00000569225 RBM28Q9NW13 759 aaKnown RBP10.61□□□□□ -0.71
CHD9-219ENST00000569225 MAD2L2Q9UI95 211 aa10.61□□□□□ -0.71
CHD9-219ENST00000569225 PRR12Q9ULL5 1215 aa10.61□□□□□ -0.71
CHD9-219ENST00000569225 PTPRFP10586 1907 aa10.61□□□□□ -0.71
CHD9-219ENST00000569225 GOLGA8AA7E2F4 631 aa10.61□□□□□ -0.71
CHD9-219ENST00000569225 SLC16A2P36021 539 aa10.61□□□□□ -0.71
CHD9-219ENST00000569225 APOBRQ0VD83 1088 aa10.61□□□□□ -0.71
CHD9-219ENST00000569225 PLS1Q14651 629 aa10.61□□□□□ -0.71
CHD9-219ENST00000569225 RTN1Q16799 776 aa10.61□□□□□ -0.71
CHD9-219ENST00000569225 TTBK2Q6IQ55 1244 aa10.61□□□□□ -0.71
CHD9-219ENST00000569225 ZNF296Q8WUU4 475 aaPredicted RBP10.61□□□□□ -0.71
CHD9-219ENST00000569225 TEX13BQ9BXU2 312 aa10.61□□□□□ -0.71
CHD9-219ENST00000569225 BRPF3Q9ULD4 1205 aa10.61□□□□□ -0.71
CHD9-219ENST00000569225 ATP2A1O14983 1001 aa10.6□□□□□ -0.71
CHD9-219ENST00000569225 SLC25A27O95847 323 aa10.6□□□□□ -0.71
CHD9-219ENST00000569225 SMARCA1P28370 1054 aa10.6□□□□□ -0.71
CHD9-219ENST00000569225 MAPK4P31152 587 aa10.6□□□□□ -0.71
CHD9-219ENST00000569225 METAP2P50579 478 aaKnown RBP eCLIP10.6□□□□□ -0.71
CHD9-219ENST00000569225 FCGRTP55899 365 aa10.6□□□□□ -0.71
CHD9-219ENST00000569225 EVCP57679 992 aa10.6□□□□□ -0.71
CHD9-219ENST00000569225 LACTBP83111 547 aaPredicted RBP10.6□□□□□ -0.71
CHD9-219ENST00000569225 TRAF1Q13077 416 aa10.6□□□□□ -0.71
CHD9-219ENST00000569225 TOB2Q14106 344 aaPredicted RBP10.6□□□□□ -0.71
CHD9-219ENST00000569225 ZNF274Q96GC6 653 aaPredicted RBP10.6□□□□□ -0.71
CHD9-219ENST00000569225 UBA5Q9GZZ9 404 aa10.6□□□□□ -0.71
CHD9-219ENST00000569225 SPATC1LQ9H0A9 340 aa10.6□□□□□ -0.71
CHD9-219ENST00000569225 TXNRD2Q9NNW7 524 aa10.6□□□□□ -0.71
CHD9-219ENST00000569225 BTBD7Q9P203 1132 aa10.6□□□□□ -0.71
CHD9-219ENST00000569225 ST18O60284 1047 aa10.59□□□□□ -0.71
CHD9-219ENST00000569225 CNMDO75829 334 aa10.59□□□□□ -0.71
CHD9-219ENST00000569225 GNRH1P01148 92 aa10.59□□□□□ -0.71
CHD9-219ENST00000569225 RXRAP19793 462 aa10.59□□□□□ -0.71
CHD9-219ENST00000569225 STAT3P40763 770 aa10.59□□□□□ -0.71
CHD9-219ENST00000569225 LBX1P52954 281 aa10.59□□□□□ -0.71
CHD9-219ENST00000569225 TMEM132BQ14DG7 1078 aa10.59□□□□□ -0.71
CHD9-219ENST00000569225 CCDC144CPQ8IYA2 1237 aa10.59□□□□□ -0.71
CHD9-219ENST00000569225 ADGRF4Q8IZF3 695 aa10.59□□□□□ -0.71
CHD9-219ENST00000569225 STAG2Q8N3U4 1231 aa10.59□□□□□ -0.71
CHD9-219ENST00000569225 SHCBP1Q8NEM2 672 aa10.59□□□□□ -0.71
CHD9-219ENST00000569225 RANBP17Q9H2T7 1088 aaKnown RBP10.59□□□□□ -0.71
CHD9-219ENST00000569225 MROH8Q9H579 483 aa10.59□□□□□ -0.71
CHD9-219ENST00000569225 MYH4Q9Y623 1939 aa10.59□□□□□ -0.71
CHD9-219ENST00000569225 FMNL1O95466 1100 aaPredicted RBP10.59□□□□□ -0.71
CHD9-219ENST00000569225 AK2P54819 239 aa10.59□□□□□ -0.71
CHD9-219ENST00000569225 TKFCQ3LXA3 575 aa10.59□□□□□ -0.71
CHD9-219ENST00000569225 SNRNP48Q6IEG0 339 aaKnown RBP10.59□□□□□ -0.71
CHD9-219ENST00000569225 CCDC174Q6PII3 467 aa10.59□□□□□ -0.71
CHD9-219ENST00000569225 CPLX2Q6PUV4 134 aaKnown RBP10.59□□□□□ -0.71
CHD9-219ENST00000569225 TMTC3Q6ZXV5 915 aa10.59□□□□□ -0.71
CHD9-219ENST00000569225 RAB11FIP4Q86YS3 637 aa10.59□□□□□ -0.71
CHD9-219ENST00000569225 RIOX2Q8IUF8 465 aa10.59□□□□□ -0.71
CHD9-219ENST00000569225 CPXCR1Q8N123 301 aa10.59□□□□□ -0.71
CHD9-219ENST00000569225 REPS2Q8NFH8 660 aa10.59□□□□□ -0.71
CHD9-219ENST00000569225 KIF2CQ99661 725 aa10.59□□□□□ -0.71
CHD9-219ENST00000569225 SPZ1Q9BXG8 430 aa10.59□□□□□ -0.71
CHD9-219ENST00000569225 MOV10L1Q9BXT6 1211 aaKnown RBP10.59□□□□□ -0.71
CHD9-219ENST00000569225 VAT1LQ9HCJ6 419 aa10.59□□□□□ -0.71
CHD9-219ENST00000569225 PRDM10Q9NQV6 1147 aa10.59□□□□□ -0.71
CHD9-219ENST00000569225 SEC63Q9UGP8 760 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms