RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 PPP4R3BQ5MIZ7 849 aa23.82■■□□□ 1.4
ABCA3-206ENST00000569062 AKNAD1Q5T1N1 836 aa23.82■■□□□ 1.4
ABCA3-206ENST00000569062 SNRNP48Q6IEG0 339 aaKnown RBP23.82■■□□□ 1.4
ABCA3-206ENST00000569062 RASGRP2Q7LDG7 609 aa23.82■■□□□ 1.4
ABCA3-206ENST00000569062 DPF3Q92784 378 aa23.82■■□□□ 1.4
ABCA3-206ENST00000569062 MMP19Q99542 508 aa23.82■■□□□ 1.4
ABCA3-206ENST00000569062 RIPK3Q9Y572 518 aa23.82■■□□□ 1.4
ABCA3-206ENST00000569062 ALPK3Q96L96 1907 aa23.82■■□□□ 1.4
ABCA3-206ENST00000569062 TMEM232C9JQI7 657 aa23.81■■□□□ 1.4
ABCA3-206ENST00000569062 ZBED4O75132 1171 aa23.81■■□□□ 1.4
ABCA3-206ENST00000569062 SLC1A4P43007 532 aa23.81■■□□□ 1.4
ABCA3-206ENST00000569062 MNX1P50219 401 aaPredicted RBP23.81■■□□□ 1.4
ABCA3-206ENST00000569062 OLFML2BQ68BL8 750 aa23.81■■□□□ 1.4
ABCA3-206ENST00000569062 LHX8Q68G74 356 aa23.81■■□□□ 1.4
ABCA3-206ENST00000569062 MFSD6Q6ZSS7 791 aa23.81■■□□□ 1.4
ABCA3-206ENST00000569062 CPXCR1Q8N123 301 aa23.81■■□□□ 1.4
ABCA3-206ENST00000569062 ANKLE1Q8NAG6 615 aa23.81■■□□□ 1.4
ABCA3-206ENST00000569062 STAG1Q8WVM7 1258 aa23.81■■□□□ 1.4
ABCA3-206ENST00000569062 GMCL1Q96IK5 515 aa23.81■■□□□ 1.4
ABCA3-206ENST00000569062 HTATIP2Q9BUP3 242 aa23.81■■□□□ 1.4
ABCA3-206ENST00000569062 TEX13BQ9BXU2 312 aa23.81■■□□□ 1.4
ABCA3-206ENST00000569062 SLC38A10Q9HBR0 1119 aa23.81■■□□□ 1.4
ABCA3-206ENST00000569062 ISY1Q9ULR0 285 aaKnown RBP23.81■■□□□ 1.4
ABCA3-206ENST00000569062 ZNF213O14771 459 aa23.8■■□□□ 1.4
ABCA3-206ENST00000569062 PGK2P07205 417 aa23.8■■□□□ 1.4
ABCA3-206ENST00000569062 SLC4A3P48751 1232 aa23.8■■□□□ 1.4
ABCA3-206ENST00000569062 KCTD1Q719H9 257 aa23.8■■□□□ 1.4
ABCA3-206ENST00000569062 TRPV1Q8NER1 839 aa23.8■■□□□ 1.4
ABCA3-206ENST00000569062 RAVER2Q9HCJ3 691 aaKnown RBP23.8■■□□□ 1.4
ABCA3-206ENST00000569062 SLC5A4Q9NY91 659 aa23.8■■□□□ 1.4
ABCA3-206ENST00000569062 MTMR7Q9Y216 660 aa23.8■■□□□ 1.4
ABCA3-206ENST00000569062 NEDD4P46934 1319 aa23.8■■□□□ 1.4
ABCA3-206ENST00000569062 ATP2A1O14983 1001 aa23.79■■□□□ 1.4
ABCA3-206ENST00000569062 COPB2P35606 906 aa23.79■■□□□ 1.4
ABCA3-206ENST00000569062 STAT2P52630 851 aa23.79■■□□□ 1.4
ABCA3-206ENST00000569062 KCTD2Q14681 263 aa23.79■■□□□ 1.4
ABCA3-206ENST00000569062 MAML3Q96JK9 1138 aa23.79■■□□□ 1.4
ABCA3-206ENST00000569062 DSCC1Q9BVC3 393 aa23.79■■□□□ 1.4
ABCA3-206ENST00000569062 TCP11L1Q9NUJ3 509 aa23.79■■□□□ 1.4
ABCA3-206ENST00000569062 CTDP1Q9Y5B0 961 aaPredicted RBP23.79■■□□□ 1.4
ABCA3-206ENST00000569062 PCP11498 1178 aaKnown RBP23.78■■□□□ 1.4
ABCA3-206ENST00000569062 CYBAP13498 195 aa23.78■■□□□ 1.4
ABCA3-206ENST00000569062 CNGA1P29973 690 aa23.78■■□□□ 1.4
ABCA3-206ENST00000569062 RCSD1Q6JBY9 416 aa23.78■■□□□ 1.4
ABCA3-206ENST00000569062 NECAB2Q7Z6G3 386 aa23.78■■□□□ 1.4
ABCA3-206ENST00000569062 H0YGN5 161 aa23.77■■□□□ 1.4
ABCA3-206ENST00000569062 IKQ13123 557 aaPredicted RBP23.77■■□□□ 1.4
ABCA3-206ENST00000569062 CHURC1Q8WUH1 139 aa23.77■■□□□ 1.4
ABCA3-206ENST00000569062 TMEM47Q9BQJ4 181 aa23.77■■□□□ 1.4
ABCA3-206ENST00000569062 RNF41Q9H4P4 317 aaPredicted RBP23.77■■□□□ 1.4
ABCA3-206ENST00000569062 ZNF792Q3KQV3 632 aa23.76■■□□□ 1.39
ABCA3-206ENST00000569062 PRAMEF19Q5SWL8 479 aa23.76■■□□□ 1.39
ABCA3-206ENST00000569062 FAM160B2Q86V87 743 aa23.76■■□□□ 1.39
ABCA3-206ENST00000569062 DDX20Q9UHI6 824 aaKnown RBP23.76■■□□□ 1.39
ABCA3-206ENST00000569062 PLA2G6O60733 806 aa23.75■■□□□ 1.39
ABCA3-206ENST00000569062 TOP1P11387 765 aaKnown RBP23.75■■□□□ 1.39
ABCA3-206ENST00000569062 OAZ1P54368 228 aa23.75■■□□□ 1.39
ABCA3-206ENST00000569062 ESR2Q92731 530 aa23.75■■□□□ 1.39
ABCA3-206ENST00000569062 ZKSCAN3Q9BRR0 538 aa23.75■■□□□ 1.39
ABCA3-206ENST00000569062 C11orf49Q9H6J7 331 aa23.75■■□□□ 1.39
ABCA3-206ENST00000569062 FDX1P10109 184 aa23.74■■□□□ 1.39
ABCA3-206ENST00000569062 CHMLP26374 656 aa23.74■■□□□ 1.39
ABCA3-206ENST00000569062 SNAP25P60880 206 aa23.74■■□□□ 1.39
ABCA3-206ENST00000569062 CCDC96Q2M329 555 aa23.74■■□□□ 1.39
ABCA3-206ENST00000569062 DCAF4Q8WV16 495 aa23.74■■□□□ 1.39
ABCA3-206ENST00000569062 PRR12Q9ULL5 1215 aa23.74■■□□□ 1.39
ABCA3-206ENST00000569062 DIS3Q9Y2L1 958 aaKnown RBP23.74■■□□□ 1.39
ABCA3-206ENST00000569062 ZNF536O15090 1300 aa23.74■■□□□ 1.39
ABCA3-206ENST00000569062 IMMTQ16891 758 aaKnown RBP23.73■■□□□ 1.39
ABCA3-206ENST00000569062 ANO1Q5XXA6 986 aa23.73■■□□□ 1.39
ABCA3-206ENST00000569062 TTBK2Q6IQ55 1244 aa23.73■■□□□ 1.39
ABCA3-206ENST00000569062 AGBL1Q96MI9 1066 aa23.73■■□□□ 1.39
ABCA3-206ENST00000569062 TTC14Q96N46 770 aa23.73■■□□□ 1.39
ABCA3-206ENST00000569062 TINF2Q9BSI4 451 aa23.73■■□□□ 1.39
ABCA3-206ENST00000569062 SMCHD1A6NHR9 2005 aa23.72■■□□□ 1.39
ABCA3-206ENST00000569062 B4E1Z4 1266 aa23.72■■□□□ 1.39
ABCA3-206ENST00000569062 EVI5O60447 810 aa23.72■■□□□ 1.39
ABCA3-206ENST00000569062 MSCO60682 206 aa23.72■■□□□ 1.39
ABCA3-206ENST00000569062 KDM4AO75164 1064 aa23.72■■□□□ 1.39
ABCA3-206ENST00000569062 DDX11Q96FC9 970 aa23.72■■□□□ 1.39
ABCA3-206ENST00000569062 HOMER2Q9NSB8 354 aa23.72■■□□□ 1.39
ABCA3-206ENST00000569062 CTNNA3Q9UI47 895 aa23.72■■□□□ 1.39
ABCA3-206ENST00000569062 PFASO15067 1338 aa23.72■■□□□ 1.39
ABCA3-206ENST00000569062 FRMPD2Q68DX3 1309 aaPredicted RBP23.72■■□□□ 1.39
ABCA3-206ENST00000569062 RAD50Q92878 1312 aa23.72■■□□□ 1.39
ABCA3-206ENST00000569062 CEP290O15078 2479 aa23.72■■□□□ 1.39
ABCA3-206ENST00000569062 DNAJC25-GNG10A0A024R161 153 aa23.71■■□□□ 1.39
ABCA3-206ENST00000569062 SLC16A2P36021 539 aa23.71■■□□□ 1.39
ABCA3-206ENST00000569062 CCDC174Q6PII3 467 aa23.71■■□□□ 1.39
ABCA3-206ENST00000569062 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.71■■□□□ 1.39
ABCA3-206ENST00000569062 CHST13Q8NET6 341 aa23.71■■□□□ 1.39
ABCA3-206ENST00000569062 SEPT4O43236 478 aa23.7■■□□□ 1.38
ABCA3-206ENST00000569062 PDHBP11177 359 aa23.7■■□□□ 1.38
ABCA3-206ENST00000569062 COL6A1P12109 1028 aa23.7■■□□□ 1.38
ABCA3-206ENST00000569062 PTH1RQ03431 593 aa23.7■■□□□ 1.38
ABCA3-206ENST00000569062 ANKRD35Q8N283 1001 aa23.7■■□□□ 1.38
ABCA3-206ENST00000569062 RUFY2Q8WXA3 655 aa23.7■■□□□ 1.38
ABCA3-206ENST00000569062 GPCPD1Q9NPB8 672 aa23.7■■□□□ 1.38
ABCA3-206ENST00000569062 FBXO40Q9UH90 709 aa23.7■■□□□ 1.38
ABCA3-206ENST00000569062 NR2E3Q9Y5X4 410 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms