RNA–Protein interactions for RNA: ENST00000568454.5

TSC2-222, Transcript of TSC complex subunit 2, human

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSC2-222	ENST00000568454	CCDC117	Q8IWD4	279 aa	Predicted RBP	18.21	■□□□□ 0.51
TSC2-222	ENST00000568454	CDAN1	Q8IWY9	1227 aa		18.21	■□□□□ 0.51
TSC2-222	ENST00000568454	EYA3	Q99504	573 aa		18.21	■□□□□ 0.51
TSC2-222	ENST00000568454	TRAPPC8	Q9Y2L5	1435 aa		18.21	■□□□□ 0.51
TSC2-222	ENST00000568454	IFNB1	P01574	187 aa		18.21	■□□□□ 0.51
TSC2-222	ENST00000568454	PTH1R	Q03431	593 aa		18.21	■□□□□ 0.51
TSC2-222	ENST00000568454	TTC19	Q6DKK2	380 aa	Predicted RBP	18.21	■□□□□ 0.51
TSC2-222	ENST00000568454	SSH3	Q8TE77	659 aa		18.21	■□□□□ 0.51
TSC2-222	ENST00000568454	FAM89A	Q96GI7	184 aa		18.21	■□□□□ 0.51
TSC2-222	ENST00000568454	KCNG1	Q9UIX4	513 aa		18.21	■□□□□ 0.51
TSC2-222	ENST00000568454	FRMD3	A2A2Y4	597 aa		18.21	■□□□□ 0.51
TSC2-222	ENST00000568454	RPSA	P08865	295 aa	Known RBP	18.21	■□□□□ 0.51
TSC2-222	ENST00000568454	CD19	P15391	556 aa		18.21	■□□□□ 0.51
TSC2-222	ENST00000568454	PPP2R5D	Q14738	602 aa		18.21	■□□□□ 0.51
TSC2-222	ENST00000568454	PDE8A	O60658	829 aa		18.2	■□□□□ 0.5
TSC2-222	ENST00000568454	CASP14	P31944	242 aa		18.2	■□□□□ 0.5
TSC2-222	ENST00000568454	YWHAE	P62258	255 aa	Known RBP	18.2	■□□□□ 0.5
TSC2-222	ENST00000568454	IP6K1	Q92551	441 aa		18.2	■□□□□ 0.5
TSC2-222	ENST00000568454	AFG3L2	Q9Y4W6	797 aa		18.2	■□□□□ 0.5
TSC2-222	ENST00000568454	PPFIA2	O75334	1257 aa		18.2	■□□□□ 0.5
TSC2-222	ENST00000568454	CLCN6	P51797	869 aa		18.2	■□□□□ 0.5
TSC2-222	ENST00000568454	ZNF790	Q6PG37	636 aa		18.2	■□□□□ 0.5
TSC2-222	ENST00000568454	NGLY1	Q96IV0	654 aa		18.2	■□□□□ 0.5
TSC2-222	ENST00000568454	SPZ1	Q9BXG8	430 aa		18.2	■□□□□ 0.5
TSC2-222	ENST00000568454	PCDHB13	Q9Y5F0	798 aa		18.2	■□□□□ 0.5
TSC2-222	ENST00000568454	RPN1	P04843	607 aa	Known RBP	18.2	■□□□□ 0.5
TSC2-222	ENST00000568454	GCKR	Q14397	625 aa		18.2	■□□□□ 0.5
TSC2-222	ENST00000568454	PRR16	Q569H4	304 aa		18.2	■□□□□ 0.5
TSC2-222	ENST00000568454	CNOT10	Q9H9A5	744 aa	Known RBP	18.2	■□□□□ 0.5
TSC2-222	ENST00000568454	METTL14	Q9HCE5	456 aa	Known RBP	18.2	■□□□□ 0.5
TSC2-222	ENST00000568454	RNF14	Q9UBS8	474 aa		18.2	■□□□□ 0.5
TSC2-222	ENST00000568454	SPTLC3	Q9NUV7	552 aa		18.2	■□□□□ 0.5
TSC2-222	ENST00000568454	TRPM2	O94759	1503 aa		18.2	■□□□□ 0.5
TSC2-222	ENST00000568454	SH3TC1	Q8TE82	1336 aa		18.2	■□□□□ 0.5
TSC2-222	ENST00000568454	E2F5	Q15329	346 aa		18.2	■□□□□ 0.5
TSC2-222	ENST00000568454	RPS6KA2	Q15349	733 aa		18.2	■□□□□ 0.5
TSC2-222	ENST00000568454	TCP11	Q8WWU5	503 aa		18.2	■□□□□ 0.5
TSC2-222	ENST00000568454	GSDMA	Q96QA5	445 aa		18.2	■□□□□ 0.5
TSC2-222	ENST00000568454	MAGEF1	Q9HAY2	307 aa		18.2	■□□□□ 0.5
TSC2-222	ENST00000568454	BZW2	Q9Y6E2	419 aa	Known RBP	18.2	■□□□□ 0.5
TSC2-222	ENST00000568454	HAUS8	Q9BT25	410 aa		18.19	■□□□□ 0.5
TSC2-222	ENST00000568454	ARHGEF10L	Q9HCE6	1279 aa		18.19	■□□□□ 0.5
TSC2-222	ENST00000568454	ZAP70	P43403	619 aa		18.19	■□□□□ 0.5
TSC2-222	ENST00000568454	POLR2F	P61218	127 aa	Known RBP	18.19	■□□□□ 0.5
TSC2-222	ENST00000568454	DIXDC1	Q155Q3	683 aa		18.19	■□□□□ 0.5
TSC2-222	ENST00000568454	RETREG2	Q8NC44	543 aa		18.19	■□□□□ 0.5
TSC2-222	ENST00000568454	UHRF1BP1L	A0JNW5	1464 aa		18.19	■□□□□ 0.5
TSC2-222	ENST00000568454	SART1	O43290	800 aa	Known RBP	18.19	■□□□□ 0.5
TSC2-222	ENST00000568454	PCDH11X	Q9BZA7	1347 aa		18.19	■□□□□ 0.5
TSC2-222	ENST00000568454	PCDH11Y	Q9BZA8	1340 aa		18.19	■□□□□ 0.5
TSC2-222	ENST00000568454	SERPINB6	P35237	376 aa		18.19	■□□□□ 0.5
TSC2-222	ENST00000568454	BLID	Q8IZY5	108 aa		18.19	■□□□□ 0.5
TSC2-222	ENST00000568454	SPATA5	Q8NB90	893 aa		18.19	■□□□□ 0.5
TSC2-222	ENST00000568454	NLRP7	Q8WX94	980 aa		18.19	■□□□□ 0.5
TSC2-222	ENST00000568454	PARD6B	Q9BYG5	372 aa		18.19	■□□□□ 0.5
TSC2-222	ENST00000568454	KLHL29	Q96CT2	875 aa		18.18	■□□□□ 0.5
TSC2-222	ENST00000568454	DNMT1	P26358	1616 aa	Known RBP	18.18	■□□□□ 0.5
TSC2-222	ENST00000568454		A0A0D9SFI3	127 aa		18.18	■□□□□ 0.5
TSC2-222	ENST00000568454	DNAJC8	O75937	253 aa	Predicted RBP	18.18	■□□□□ 0.5
TSC2-222	ENST00000568454	MCTP2	Q6DN12	878 aa		18.18	■□□□□ 0.5
TSC2-222	ENST00000568454	GPBP1	Q86WP2	473 aa		18.18	■□□□□ 0.5
TSC2-222	ENST00000568454	PPP6R2	O75170	966 aa		18.18	■□□□□ 0.5
TSC2-222	ENST00000568454	HEXIM1	O94992	359 aa	Known RBP	18.18	■□□□□ 0.5
TSC2-222	ENST00000568454	EHHADH	Q08426	723 aa		18.18	■□□□□ 0.5
TSC2-222	ENST00000568454	ALS2CL	Q60I27	953 aa		18.18	■□□□□ 0.5
TSC2-222	ENST00000568454	FBXO41	Q8TF61	875 aa		18.18	■□□□□ 0.5
TSC2-222	ENST00000568454	ZNF594	Q96JF6	807 aa	Predicted RBP	18.18	■□□□□ 0.5
TSC2-222	ENST00000568454	YTHDC2	Q9H6S0	1430 aa	Known RBP	18.18	■□□□□ 0.5
TSC2-222	ENST00000568454	ASXL2	Q76L83	1435 aa		18.18	■□□□□ 0.5
TSC2-222	ENST00000568454	UHMK1	Q8TAS1	419 aa	Known RBP	18.18	■□□□□ 0.5
TSC2-222	ENST00000568454	SUDS3	Q9H7L9	328 aa	Predicted RBP	18.18	■□□□□ 0.5
TSC2-222	ENST00000568454	EEF1G	P26641	437 aa	Known RBP	18.17	■□□□□ 0.5
TSC2-222	ENST00000568454	HADH	Q16836	314 aa	Known RBP	18.17	■□□□□ 0.5
TSC2-222	ENST00000568454	SCOC	Q9UIL1	159 aa		18.17	■□□□□ 0.5
TSC2-222	ENST00000568454	PCDHA5	Q9Y5H7	936 aa		18.17	■□□□□ 0.5
TSC2-222	ENST00000568454	PZP	P20742	1482 aa		18.17	■□□□□ 0.5
TSC2-222	ENST00000568454	HMGB1P1	B2RPK0	211 aa	Predicted RBP	18.17	■□□□□ 0.5
TSC2-222	ENST00000568454	GALNT17	Q6IS24	598 aa		18.17	■□□□□ 0.5
TSC2-222	ENST00000568454	JAG2	Q9Y219	1238 aa		18.17	■□□□□ 0.5
TSC2-222	ENST00000568454	LONP1	P36776	959 aa	Known RBP	18.17	■□□□□ 0.5
TSC2-222	ENST00000568454	IFNAR2	P48551	515 aa		18.17	■□□□□ 0.5
TSC2-222	ENST00000568454	FBXO18	Q8NFZ0	1043 aa		18.17	■□□□□ 0.5
TSC2-222	ENST00000568454	HAUS1	Q96CS2	278 aa		18.17	■□□□□ 0.5
TSC2-222	ENST00000568454	ATP8A2	Q9NTI2	1148 aa		18.17	■□□□□ 0.5
TSC2-222	ENST00000568454	VPS41	P49754	854 aa		18.17	■□□□□ 0.5
TSC2-222	ENST00000568454	SLC39A14	Q15043	492 aa		18.17	■□□□□ 0.5
TSC2-222	ENST00000568454	TXLNG	Q9NUQ3	528 aa		18.17	■□□□□ 0.5
TSC2-222	ENST00000568454	NDUFB9	Q9Y6M9	179 aa		18.17	■□□□□ 0.5
TSC2-222	ENST00000568454	WDR7	Q9Y4E6	1490 aa		18.17	■□□□□ 0.5
TSC2-222	ENST00000568454	SPECC1L-ADORA2A	F8WAN1	911 aa		18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	PPARA	Q07869	468 aa		18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	TERF2	Q15554	542 aa		18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	JPH2	Q9BR39	696 aa	Predicted RBP	18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	HAUS2	Q9NVX0	235 aa		18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	CLIC4	Q9Y696	253 aa		18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	MROH5	Q6ZUA9	1318 aa		18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	ADCY9	O60503	1353 aa		18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	SMCO2	A6NFE2	343 aa		18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	KRT3	P12035	628 aa		18.16	■□□□□ 0.5
TSC2-222	ENST00000568454	FNBP4	Q8N3X1	1017 aa	Predicted RBP	18.16	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms