RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 BSDC1Q9NW68 430 aaPredicted RBP6.99□□□□□ -1.29
CAPN3-217ENST00000567817 ZC3H7BQ9UGR2 993 aaKnown RBP6.99□□□□□ -1.29
CAPN3-217ENST00000567817 KIF1AQ12756 1690 aa6.98□□□□□ -1.29
CAPN3-217ENST00000567817 GFRA2O00451 464 aa6.98□□□□□ -1.29
CAPN3-217ENST00000567817 LEFTY1O75610 366 aa6.98□□□□□ -1.29
CAPN3-217ENST00000567817 ZNF16P17020 682 aaPredicted RBP6.98□□□□□ -1.29
CAPN3-217ENST00000567817 CAP2P40123 477 aa6.98□□□□□ -1.29
CAPN3-217ENST00000567817 CDK8P49336 464 aa6.98□□□□□ -1.29
CAPN3-217ENST00000567817 ETF1P62495 437 aaKnown RBP6.98□□□□□ -1.29
CAPN3-217ENST00000567817 RPL6Q02878 288 aaKnown RBP6.98□□□□□ -1.29
CAPN3-217ENST00000567817 RELL1Q8IUW5 271 aa6.98□□□□□ -1.29
CAPN3-217ENST00000567817 RHOVQ96L33 236 aa6.98□□□□□ -1.29
CAPN3-217ENST00000567817 TMEM74Q96NL1 305 aa6.98□□□□□ -1.29
CAPN3-217ENST00000567817 PRDM10Q9NQV6 1147 aa6.98□□□□□ -1.29
CAPN3-217ENST00000567817 ANGEL1Q9UNK9 670 aaKnown RBP6.98□□□□□ -1.29
CAPN3-217ENST00000567817 TNS1Q9HBL0 1735 aaKnown RBP6.98□□□□□ -1.29
CAPN3-217ENST00000567817 SPATA31A3Q5VYP0 1347 aa6.98□□□□□ -1.29
CAPN3-217ENST00000567817 BRD4O60885 1362 aaPredicted RBP6.97□□□□□ -1.29
CAPN3-217ENST00000567817 E9PCH4 1651 aa6.97□□□□□ -1.29
CAPN3-217ENST00000567817 PLCH1Q4KWH8 1693 aa6.97□□□□□ -1.29
CAPN3-217ENST00000567817 GP2P55259 537 aaKnown RBP6.97□□□□□ -1.29
CAPN3-217ENST00000567817 ARMCX6Q7L4S7 300 aa6.97□□□□□ -1.29
CAPN3-217ENST00000567817 HID1Q8IV36 788 aa6.97□□□□□ -1.29
CAPN3-217ENST00000567817 FBRSQ9HAH7 460 aa6.97□□□□□ -1.29
CAPN3-217ENST00000567817 CCDC39Q9UFE4 941 aa6.97□□□□□ -1.29
CAPN3-217ENST00000567817 CCDC9Q9Y3X0 531 aaKnown RBP6.97□□□□□ -1.29
CAPN3-217ENST00000567817 ARHGEF10O15013 1369 aa6.96□□□□□ -1.29
CAPN3-217ENST00000567817 TNS3Q68CZ2 1445 aa6.96□□□□□ -1.3
CAPN3-217ENST00000567817 SMG6Q86US8 1419 aaKnown RBP6.96□□□□□ -1.3
CAPN3-217ENST00000567817 KCNQ2O43526 872 aa6.96□□□□□ -1.3
CAPN3-217ENST00000567817 ADAMTS4O75173 837 aa6.96□□□□□ -1.3
CAPN3-217ENST00000567817 GRK4P32298 578 aa6.96□□□□□ -1.3
CAPN3-217ENST00000567817 GBP2P32456 591 aaPredicted RBP6.96□□□□□ -1.3
CAPN3-217ENST00000567817 PDE4BQ07343 736 aa6.96□□□□□ -1.3
CAPN3-217ENST00000567817 CAMK2GQ13555 558 aaPredicted RBP6.96□□□□□ -1.3
CAPN3-217ENST00000567817 SLBPQ14493 270 aaKnown RBP eCLIP6.96□□□□□ -1.3
CAPN3-217ENST00000567817 FAM196AQ6ZSG2 479 aa6.96□□□□□ -1.3
CAPN3-217ENST00000567817 ERMP1Q7Z2K6 904 aa6.96□□□□□ -1.3
CAPN3-217ENST00000567817 NETO1Q8TDF5 533 aa6.96□□□□□ -1.3
CAPN3-217ENST00000567817 JARID2Q92833 1246 aaPredicted RBP6.96□□□□□ -1.3
CAPN3-217ENST00000567817 CAMKK2Q96RR4 588 aa6.96□□□□□ -1.3
CAPN3-217ENST00000567817 GTF2IRD1Q9UHL9 959 aa6.96□□□□□ -1.3
CAPN3-217ENST00000567817 ROBO2Q9HCK4 1378 aa6.95□□□□□ -1.3
CAPN3-217ENST00000567817 F6X3S4 739 aa6.95□□□□□ -1.3
CAPN3-217ENST00000567817 CILPO75339 1184 aa6.95□□□□□ -1.3
CAPN3-217ENST00000567817 BPNT1O95861 308 aa6.95□□□□□ -1.3
CAPN3-217ENST00000567817 PF4P02776 101 aa6.95□□□□□ -1.3
CAPN3-217ENST00000567817 ARHGAP27Q6ZUM4 889 aa6.95□□□□□ -1.3
CAPN3-217ENST00000567817 STK11IPQ8N1F8 1099 aa6.95□□□□□ -1.3
CAPN3-217ENST00000567817 MFSD2AQ8NA29 543 aa6.95□□□□□ -1.3
CAPN3-217ENST00000567817 GATAD2BQ8WXI9 593 aa6.95□□□□□ -1.3
CAPN3-217ENST00000567817 MISP3Q96FF7 219 aa6.95□□□□□ -1.3
CAPN3-217ENST00000567817 FBXL18Q96ME1 805 aa6.95□□□□□ -1.3
CAPN3-217ENST00000567817 FOXQ1Q9C009 403 aa6.95□□□□□ -1.3
CAPN3-217ENST00000567817 RREB1Q92766 1687 aa6.95□□□□□ -1.3
CAPN3-217ENST00000567817 MYBBP1AQ9BQG0 1328 aaKnown RBP6.95□□□□□ -1.3
CAPN3-217ENST00000567817 SBNO1A3KN83 1393 aa6.95□□□□□ -1.3
CAPN3-217ENST00000567817 THSD7AQ9UPZ6 1657 aa6.94□□□□□ -1.3
CAPN3-217ENST00000567817 RBM47A0AV96 593 aaKnown RBP6.94□□□□□ -1.3
CAPN3-217ENST00000567817 FAM221AA4D161 298 aa6.94□□□□□ -1.3
CAPN3-217ENST00000567817 IGF2BP3O00425 579 aaKnown RBP eCLIP6.94□□□□□ -1.3
CAPN3-217ENST00000567817 CEACAM5P06731 702 aa6.94□□□□□ -1.3
CAPN3-217ENST00000567817 OXCT1P55809 520 aa6.94□□□□□ -1.3
CAPN3-217ENST00000567817 EZH2Q15910 746 aaKnown RBP6.94□□□□□ -1.3
CAPN3-217ENST00000567817 NKG7Q16617 165 aa6.94□□□□□ -1.3
CAPN3-217ENST00000567817 BNC2Q6ZN30 1099 aaPredicted RBP6.94□□□□□ -1.3
CAPN3-217ENST00000567817 FAM214BQ7L5A3 538 aa6.94□□□□□ -1.3
CAPN3-217ENST00000567817 MRPL41Q8IXM3 137 aaKnown RBP6.94□□□□□ -1.3
CAPN3-217ENST00000567817 FAM9BQ8IZU0 186 aa6.94□□□□□ -1.3
CAPN3-217ENST00000567817 FAM181AQ8N9Y4 354 aa6.94□□□□□ -1.3
CAPN3-217ENST00000567817 ADAM30Q9UKF2 790 aa6.94□□□□□ -1.3
CAPN3-217ENST00000567817 OAS3Q9Y6K5 1087 aaKnown RBP6.94□□□□□ -1.3
CAPN3-217ENST00000567817 EOMESO95936 686 aa6.93□□□□□ -1.3
CAPN3-217ENST00000567817 F13A1P00488 732 aa6.93□□□□□ -1.3
CAPN3-217ENST00000567817 CST3P01034 146 aaPredicted RBP6.93□□□□□ -1.3
CAPN3-217ENST00000567817 PGRP06401 933 aa6.93□□□□□ -1.3
CAPN3-217ENST00000567817 IFI16Q16666 785 aaKnown RBP6.93□□□□□ -1.3
CAPN3-217ENST00000567817 SNAP47Q5SQN1 464 aa6.93□□□□□ -1.3
CAPN3-217ENST00000567817 HS2ST1Q7LGA3 356 aa6.93□□□□□ -1.3
CAPN3-217ENST00000567817 PLD6Q8N2A8 252 aaKnown RBP6.93□□□□□ -1.3
CAPN3-217ENST00000567817 HEXIM2Q96MH2 286 aaKnown RBP6.93□□□□□ -1.3
CAPN3-217ENST00000567817 KBTBD4Q9NVX7 518 aa6.93□□□□□ -1.3
CAPN3-217ENST00000567817 MAPK8IP1Q9UQF2 711 aa6.93□□□□□ -1.3
CAPN3-217ENST00000567817 NUDCQ9Y266 331 aa6.93□□□□□ -1.3
CAPN3-217ENST00000567817 CHD4Q14839 1912 aa6.93□□□□□ -1.3
CAPN3-217ENST00000567817 NUP188Q5SRE5 1749 aa6.93□□□□□ -1.3
CAPN3-217ENST00000567817 NRAPQ86VF7 1730 aa6.93□□□□□ -1.3
CAPN3-217ENST00000567817 RGPD3A6NKT7 1758 aaPredicted RBP6.92□□□□□ -1.3
CAPN3-217ENST00000567817 RGPD4Q7Z3J3 1758 aa6.92□□□□□ -1.3
CAPN3-217ENST00000567817 ST20-MTHFSA0A0A6YYL1 179 aa6.92□□□□□ -1.3
CAPN3-217ENST00000567817 SLITRK5O94991 958 aa6.92□□□□□ -1.3
CAPN3-217ENST00000567817 TMF1P82094 1093 aa6.92□□□□□ -1.3
CAPN3-217ENST00000567817 FAM160A1Q05DH4 1040 aa6.92□□□□□ -1.3
CAPN3-217ENST00000567817 MPP2Q14168 576 aa6.92□□□□□ -1.3
CAPN3-217ENST00000567817 PRAMEF13Q5VWM6 474 aa6.92□□□□□ -1.3
CAPN3-217ENST00000567817 SLC6A19Q695T7 634 aa6.92□□□□□ -1.3
CAPN3-217ENST00000567817 NFXL1Q6ZNB6 911 aa6.92□□□□□ -1.3
CAPN3-217ENST00000567817 FLCNQ8NFG4 579 aa6.92□□□□□ -1.3
CAPN3-217ENST00000567817 PNISRQ8TF01 805 aaKnown RBP6.92□□□□□ -1.3
CAPN3-217ENST00000567817 BCL7CQ8WUZ0 217 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms