RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 IGHDP01880 384 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 TSPY3P0CV98 308 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 TSPY8P0CW00 308 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 ERCC3P19447 782 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 ADORA2AP29274 412 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 COPB2P35606 906 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 NUCB1Q02818 461 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 KLRC3Q07444 240 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 PPARAQ07869 468 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 CACNB2Q08289 660 aaPredicted RBP5.69□□□□□ -1.5
CLK3-219ENST00000567805 PLS1Q14651 629 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 TMEM132BQ14DG7 1078 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 ALX1Q15699 326 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 CCL14Q16627 93 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 MCMDC2Q4G0Z9 681 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 PPP4R3BQ5MIZ7 849 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 FAM83BQ5T0W9 1011 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 MFSD14CQ5VZR4 134 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 B4GALNT3Q6L9W6 998 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 NECAB2Q7Z6G3 386 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 DPP9Q86TI2 863 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 CHD1LQ86WJ1 897 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 ABRAQ8N0Z2 381 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 NEDD1Q8NHV4 660 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 EXOC6Q8TAG9 804 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 DPF3Q92784 378 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 MKL1Q969V6 931 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 ATG4CQ96DT6 458 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 CEP95Q96GE4 821 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 OSBPL3Q9H4L5 887 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 FBXO28Q9NVF7 368 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 SLC5A4Q9NY91 659 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 MTMR4Q9NYA4 1195 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 CLIP2Q9UDT6 1046 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 ANAPC4Q9UJX5 808 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 OGDHLQ9ULD0 1010 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 PPP1R9AQ9ULJ8 1098 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 ZMYM6O95789 1325 aa5.69□□□□□ -1.5
CLK3-219ENST00000567805 A0A0D9SFI3 127 aa5.68□□□□□ -1.5
CLK3-219ENST00000567805 VWA5AO00534 786 aa5.68□□□□□ -1.5
CLK3-219ENST00000567805 RAD21O60216 631 aa5.68□□□□□ -1.5
CLK3-219ENST00000567805 MSCO60682 206 aa5.68□□□□□ -1.5
CLK3-219ENST00000567805 SLC34A2O95436 690 aa5.68□□□□□ -1.5
CLK3-219ENST00000567805 IGHA2P01877 340 aa5.68□□□□□ -1.5
CLK3-219ENST00000567805 FCER1AP12319 257 aa5.68□□□□□ -1.5
CLK3-219ENST00000567805 CCND3P30281 292 aaPredicted RBP5.68□□□□□ -1.5
CLK3-219ENST00000567805 MFAP1P55081 439 aaKnown RBP5.68□□□□□ -1.5
CLK3-219ENST00000567805 TFAP4Q01664 338 aa5.68□□□□□ -1.5
CLK3-219ENST00000567805 VPS53Q5VIR6 699 aa5.68□□□□□ -1.5
CLK3-219ENST00000567805 OLFML2BQ68BL8 750 aa5.68□□□□□ -1.5
CLK3-219ENST00000567805 CCDC129Q6ZRS4 1044 aa5.68□□□□□ -1.5
CLK3-219ENST00000567805 NCAPG2Q86XI2 1143 aa5.68□□□□□ -1.5
CLK3-219ENST00000567805 RIOX2Q8IUF8 465 aa5.68□□□□□ -1.5
CLK3-219ENST00000567805 PLEKHM2Q8IWE5 1019 aa5.68□□□□□ -1.5
CLK3-219ENST00000567805 PRPF38AQ8NAV1 312 aaKnown RBP5.68□□□□□ -1.5
CLK3-219ENST00000567805 GMCL1P1Q8NEA9 526 aa5.68□□□□□ -1.5
CLK3-219ENST00000567805 REPS2Q8NFH8 660 aa5.68□□□□□ -1.5
CLK3-219ENST00000567805 NPLOC4Q8TAT6 608 aa5.68□□□□□ -1.5
CLK3-219ENST00000567805 RILPL2Q969X0 211 aa5.68□□□□□ -1.5
CLK3-219ENST00000567805 PAWRQ96IZ0 340 aaKnown RBP5.68□□□□□ -1.5
CLK3-219ENST00000567805 FAM227BQ96M60 508 aa5.68□□□□□ -1.5
CLK3-219ENST00000567805 NUP88Q99567 741 aaPredicted RBP5.68□□□□□ -1.5
CLK3-219ENST00000567805 SLF1Q9BQI6 1058 aa5.68□□□□□ -1.5
CLK3-219ENST00000567805 NBPF3Q9H094 633 aa5.68□□□□□ -1.5
CLK3-219ENST00000567805 FLRT1Q9NZU1 646 aa5.68□□□□□ -1.5
CLK3-219ENST00000567805 ZNF214Q9UL59 606 aaPredicted RBP5.68□□□□□ -1.5
CLK3-219ENST00000567805 SUPT16HQ9Y5B9 1047 aaKnown RBP5.68□□□□□ -1.5
CLK3-219ENST00000567805 NR2E3Q9Y5X4 410 aa5.68□□□□□ -1.5
CLK3-219ENST00000567805 SMCHD1A6NHR9 2005 aa5.68□□□□□ -1.5
CLK3-219ENST00000567805 CCDC171Q6TFL3 1326 aa5.68□□□□□ -1.5
CLK3-219ENST00000567805 MCM3APO60318 1980 aa5.67□□□□□ -1.5
CLK3-219ENST00000567805 LAMA3Q16787 3333 aa5.67□□□□□ -1.5
CLK3-219ENST00000567805 TSPY2A6NKD2 308 aa5.67□□□□□ -1.5
CLK3-219ENST00000567805 H0YGN5 161 aa5.67□□□□□ -1.5
CLK3-219ENST00000567805 HIP1O00291 1037 aa5.67□□□□□ -1.5
CLK3-219ENST00000567805 ATP2A1O14983 1001 aa5.67□□□□□ -1.5
CLK3-219ENST00000567805 ORC4O43929 436 aa5.67□□□□□ -1.5
CLK3-219ENST00000567805 EVI5O60447 810 aa5.67□□□□□ -1.5
CLK3-219ENST00000567805 COBLO75128 1261 aa5.67□□□□□ -1.5
CLK3-219ENST00000567805 FGAP02671 866 aa5.67□□□□□ -1.5
CLK3-219ENST00000567805 FGRP09769 529 aa5.67□□□□□ -1.5
CLK3-219ENST00000567805 FDX1P10109 184 aa5.67□□□□□ -1.5
CLK3-219ENST00000567805 HSPD1P10809 573 aaKnown RBP5.67□□□□□ -1.5
CLK3-219ENST00000567805 BMP3P12645 472 aa5.67□□□□□ -1.5
CLK3-219ENST00000567805 CYBAP13498 195 aa5.67□□□□□ -1.5
CLK3-219ENST00000567805 STAT3P40763 770 aa5.67□□□□□ -1.5
CLK3-219ENST00000567805 OAZ1P54368 228 aa5.67□□□□□ -1.5
CLK3-219ENST00000567805 CTDSPL2Q05D32 466 aa5.67□□□□□ -1.5
CLK3-219ENST00000567805 NMIQ13287 307 aaPredicted RBP5.67□□□□□ -1.5
CLK3-219ENST00000567805 FAM47AQ5JRC9 791 aa5.67□□□□□ -1.5
CLK3-219ENST00000567805 HABP4Q5JVS0 413 aaKnown RBP5.67□□□□□ -1.5
CLK3-219ENST00000567805 SLFN13Q68D06 897 aa5.67□□□□□ -1.5
CLK3-219ENST00000567805 ZNF589Q86UQ0 364 aaPredicted RBP5.67□□□□□ -1.5
CLK3-219ENST00000567805 LRRC47Q8N1G4 583 aaKnown RBP5.67□□□□□ -1.5
CLK3-219ENST00000567805 PDCD7Q8N8D1 485 aaKnown RBP5.67□□□□□ -1.5
CLK3-219ENST00000567805 DIS3LQ8TF46 1054 aaKnown RBP5.67□□□□□ -1.5
CLK3-219ENST00000567805 GMCL1Q96IK5 515 aa5.67□□□□□ -1.5
CLK3-219ENST00000567805 MAML3Q96JK9 1138 aa5.67□□□□□ -1.5
CLK3-219ENST00000567805 MMP19Q99542 508 aa5.67□□□□□ -1.5
CLK3-219ENST00000567805 TEX13BQ9BXU2 312 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms