RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 KIF3CO14782 793 aa13.68□□□□□ -0.22
CSPG4P13-202ENST00000567704 NOL3O60936 208 aaKnown RBP13.68□□□□□ -0.22
CSPG4P13-202ENST00000567704 PARP1P09874 1014 aaKnown RBP13.68□□□□□ -0.22
CSPG4P13-202ENST00000567704 CYP27A1Q02318 531 aa13.68□□□□□ -0.22
CSPG4P13-202ENST00000567704 NONOQ15233 471 aaKnown RBP eCLIP13.68□□□□□ -0.22
CSPG4P13-202ENST00000567704 PANX2Q96RD6 677 aa13.68□□□□□ -0.22
CSPG4P13-202ENST00000567704 CTIFO43310 598 aaKnown RBP13.68□□□□□ -0.22
CSPG4P13-202ENST00000567704 NDUFA10O95299 355 aa13.68□□□□□ -0.22
CSPG4P13-202ENST00000567704 SLFN14P0C7P3 912 aa13.68□□□□□ -0.22
CSPG4P13-202ENST00000567704 CLUL1Q15846 466 aa13.68□□□□□ -0.22
CSPG4P13-202ENST00000567704 PTGDRQ13258 359 aa13.67□□□□□ -0.22
CSPG4P13-202ENST00000567704 FAM133BQ5BKY9 247 aaKnown RBP13.67□□□□□ -0.22
CSPG4P13-202ENST00000567704 TEX11Q8IYF3 940 aa13.67□□□□□ -0.22
CSPG4P13-202ENST00000567704 KLHL29Q96CT2 875 aa13.67□□□□□ -0.22
CSPG4P13-202ENST00000567704 DBNLQ9UJU6 430 aaKnown RBP13.67□□□□□ -0.22
CSPG4P13-202ENST00000567704 ANAPC4Q9UJX5 808 aa13.67□□□□□ -0.22
CSPG4P13-202ENST00000567704 PICALMQ13492 652 aa13.67□□□□□ -0.22
CSPG4P13-202ENST00000567704 SDCCAG8Q86SQ7 713 aaPredicted RBP13.67□□□□□ -0.22
CSPG4P13-202ENST00000567704 FANCBQ8NB91 859 aa13.67□□□□□ -0.22
CSPG4P13-202ENST00000567704 PI4K2BQ8TCG2 481 aa13.67□□□□□ -0.22
CSPG4P13-202ENST00000567704 IP6K1Q92551 441 aa13.67□□□□□ -0.22
CSPG4P13-202ENST00000567704 FERMT1Q9BQL6 677 aa13.67□□□□□ -0.22
CSPG4P13-202ENST00000567704 ACTR5Q9H9F9 607 aaPredicted RBP13.67□□□□□ -0.22
CSPG4P13-202ENST00000567704 KDM5AP29375 1690 aaKnown RBP13.67□□□□□ -0.22
CSPG4P13-202ENST00000567704 SUN1O94901 812 aa13.67□□□□□ -0.22
CSPG4P13-202ENST00000567704 GGCXP38435 758 aa13.67□□□□□ -0.22
CSPG4P13-202ENST00000567704 PHLDB3Q6NSJ2 640 aa13.67□□□□□ -0.22
CSPG4P13-202ENST00000567704 GOLPH3LQ9H4A5 285 aa13.67□□□□□ -0.22
CSPG4P13-202ENST00000567704 PARP2Q9UGN5 583 aa13.67□□□□□ -0.22
CSPG4P13-202ENST00000567704 CD2APQ9Y5K6 639 aa13.67□□□□□ -0.22
CSPG4P13-202ENST00000567704 TADA3O75528 432 aa13.67□□□□□ -0.22
CSPG4P13-202ENST00000567704 POLR2FP61218 127 aaKnown RBP13.67□□□□□ -0.22
CSPG4P13-202ENST00000567704 ACTN3Q08043 901 aaPredicted RBP13.67□□□□□ -0.22
CSPG4P13-202ENST00000567704 MAP7D1Q3KQU3 841 aa13.67□□□□□ -0.22
CSPG4P13-202ENST00000567704 TXNDC16Q9P2K2 825 aa13.67□□□□□ -0.22
CSPG4P13-202ENST00000567704 ALS2CLQ60I27 953 aa13.66□□□□□ -0.22
CSPG4P13-202ENST00000567704 ZNF622Q969S3 477 aaKnown RBP eCLIP13.66□□□□□ -0.22
CSPG4P13-202ENST00000567704 GLI2P10070 1586 aa13.66□□□□□ -0.22
CSPG4P13-202ENST00000567704 KRT5P13647 590 aa13.66□□□□□ -0.22
CSPG4P13-202ENST00000567704 VPS41P49754 854 aa13.66□□□□□ -0.22
CSPG4P13-202ENST00000567704 TBC1D8O95759 1140 aa13.66□□□□□ -0.22
CSPG4P13-202ENST00000567704 ARMCX5Q6P1M9 558 aa13.66□□□□□ -0.22
CSPG4P13-202ENST00000567704 SRGAP2O75044 1071 aa13.66□□□□□ -0.22
CSPG4P13-202ENST00000567704 CEP128Q6ZU80 1094 aa13.66□□□□□ -0.22
CSPG4P13-202ENST00000567704 GSPT2Q8IYD1 628 aaKnown RBP13.66□□□□□ -0.22
CSPG4P13-202ENST00000567704 RPGRQ92834 1020 aaKnown RBP13.66□□□□□ -0.22
CSPG4P13-202ENST00000567704 DCAF5Q96JK2 942 aa13.66□□□□□ -0.22
CSPG4P13-202ENST00000567704 SLC39A2Q9NP94 309 aa13.66□□□□□ -0.22
CSPG4P13-202ENST00000567704 NOVA2Q9UNW9 492 aaKnown RBP13.66□□□□□ -0.22
CSPG4P13-202ENST00000567704 BAG2O95816 211 aa13.65□□□□□ -0.22
CSPG4P13-202ENST00000567704 ZKSCAN8Q15776 578 aaPredicted RBP13.65□□□□□ -0.22
CSPG4P13-202ENST00000567704 ARHGAP44Q17R89 818 aa13.65□□□□□ -0.22
CSPG4P13-202ENST00000567704 CNOT6LQ96LI5 555 aaKnown RBP13.65□□□□□ -0.22
CSPG4P13-202ENST00000567704 ERVK-7P63135 1459 aa13.65□□□□□ -0.22
CSPG4P13-202ENST00000567704 CALUO43852 315 aaPredicted RBP13.65□□□□□ -0.22
CSPG4P13-202ENST00000567704 OPHN1O60890 802 aa13.65□□□□□ -0.22
CSPG4P13-202ENST00000567704 MOCS3O95396 460 aa13.65□□□□□ -0.22
CSPG4P13-202ENST00000567704 AIFM3Q96NN9 605 aa13.65□□□□□ -0.22
CSPG4P13-202ENST00000567704 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.65□□□□□ -0.22
CSPG4P13-202ENST00000567704 NIP7Q9Y221 180 aaKnown RBP eCLIP13.65□□□□□ -0.22
CSPG4P13-202ENST00000567704 ATP8A1Q9Y2Q0 1164 aa13.65□□□□□ -0.22
CSPG4P13-202ENST00000567704 TROVE2P10155 538 aaKnown RBP eCLIP13.65□□□□□ -0.22
CSPG4P13-202ENST00000567704 MRPL12P52815 198 aaKnown RBP13.65□□□□□ -0.22
CSPG4P13-202ENST00000567704 PUM3Q15397 648 aaKnown RBP13.65□□□□□ -0.22
CSPG4P13-202ENST00000567704 DIXDC1Q155Q3 683 aa13.65□□□□□ -0.22
CSPG4P13-202ENST00000567704 E4F1Q66K89 784 aaPredicted RBP13.65□□□□□ -0.22
CSPG4P13-202ENST00000567704 KRT25Q7Z3Z0 450 aa13.65□□□□□ -0.22
CSPG4P13-202ENST00000567704 WDR24Q96S15 920 aa13.65□□□□□ -0.22
CSPG4P13-202ENST00000567704 IMPG2Q9BZV3 1241 aa13.65□□□□□ -0.22
CSPG4P13-202ENST00000567704 VPS37BQ9H9H4 285 aa13.65□□□□□ -0.22
CSPG4P13-202ENST00000567704 GJB4Q9NTQ9 266 aa13.65□□□□□ -0.22
CSPG4P13-202ENST00000567704 F8W031 263 aaPredicted RBP13.65□□□□□ -0.22
CSPG4P13-202ENST00000567704 MFAP3LO75121 409 aa13.65□□□□□ -0.22
CSPG4P13-202ENST00000567704 GAS8O95995 478 aa13.65□□□□□ -0.22
CSPG4P13-202ENST00000567704 MAP7Q14244 749 aa13.65□□□□□ -0.22
CSPG4P13-202ENST00000567704 TBC1D1Q86TI0 1168 aaPredicted RBP13.65□□□□□ -0.22
CSPG4P13-202ENST00000567704 CCDC13Q8IYE1 715 aa13.65□□□□□ -0.22
CSPG4P13-202ENST00000567704 NCAPGQ9BPX3 1015 aa13.65□□□□□ -0.22
CSPG4P13-202ENST00000567704 KAT6BQ8WYB5 2073 aa13.65□□□□□ -0.23
CSPG4P13-202ENST00000567704 EXOC5O00471 708 aa13.64□□□□□ -0.23
CSPG4P13-202ENST00000567704 H2AFZP0C0S5 128 aa13.64□□□□□ -0.23
CSPG4P13-202ENST00000567704 APOA5Q6Q788 366 aa13.64□□□□□ -0.23
CSPG4P13-202ENST00000567704 H2AFVQ71UI9 128 aa13.64□□□□□ -0.23
CSPG4P13-202ENST00000567704 FNBP4Q8N3X1 1017 aaPredicted RBP13.64□□□□□ -0.23
CSPG4P13-202ENST00000567704 TRIM6Q9C030 488 aaPredicted RBP13.64□□□□□ -0.23
CSPG4P13-202ENST00000567704 GCP02774 474 aa13.64□□□□□ -0.23
CSPG4P13-202ENST00000567704 STAT1P42224 750 aa13.64□□□□□ -0.23
CSPG4P13-202ENST00000567704 PSMD6Q15008 389 aa13.64□□□□□ -0.23
CSPG4P13-202ENST00000567704 TAF11Q15544 211 aa13.64□□□□□ -0.23
CSPG4P13-202ENST00000567704 DZIP3Q86Y13 1208 aaKnown RBP13.64□□□□□ -0.23
CSPG4P13-202ENST00000567704 GPCPD1Q9NPB8 672 aa13.64□□□□□ -0.23
CSPG4P13-202ENST00000567704 PRDM4Q9UKN5 801 aa13.64□□□□□ -0.23
CSPG4P13-202ENST00000567704 NFU1Q9UMS0 254 aa13.64□□□□□ -0.23
CSPG4P13-202ENST00000567704 CCZ1BP86790 482 aa13.64□□□□□ -0.23
CSPG4P13-202ENST00000567704 CCZ1P86791 482 aaPredicted RBP13.64□□□□□ -0.23
CSPG4P13-202ENST00000567704 TOB2Q14106 344 aaPredicted RBP13.64□□□□□ -0.23
CSPG4P13-202ENST00000567704 CALCRLQ16602 461 aa13.64□□□□□ -0.23
CSPG4P13-202ENST00000567704 NBPF6Q5VWK0 638 aa13.64□□□□□ -0.23
CSPG4P13-202ENST00000567704 NBPF4Q96M43 638 aa13.64□□□□□ -0.23
CSPG4P13-202ENST00000567704 PCDHB13Q9Y5F0 798 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms