RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 CHST13Q8NET6 341 aa13.25□□□□□ -0.29
CDH3-206ENST00000567674 ATG4CQ96DT6 458 aa13.25□□□□□ -0.29
CDH3-206ENST00000567674 SLC38A10Q9HBR0 1119 aa13.25□□□□□ -0.29
CDH3-206ENST00000567674 CTNNA3Q9UI47 895 aa13.25□□□□□ -0.29
CDH3-206ENST00000567674 SMIM22K7EJ46 135 aa13.24□□□□□ -0.29
CDH3-206ENST00000567674 EVI5O60447 810 aa13.24□□□□□ -0.29
CDH3-206ENST00000567674 ECM2O94769 699 aaPredicted RBP13.24□□□□□ -0.29
CDH3-206ENST00000567674 BMP3P12645 472 aa13.24□□□□□ -0.29
CDH3-206ENST00000567674 KCTD2Q14681 263 aa13.24□□□□□ -0.29
CDH3-206ENST00000567674 FAM83BQ5T0W9 1011 aa13.24□□□□□ -0.29
CDH3-206ENST00000567674 NCAPG2Q86XI2 1143 aa13.24□□□□□ -0.29
CDH3-206ENST00000567674 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.24□□□□□ -0.29
CDH3-206ENST00000567674 STAG1Q8WVM7 1258 aa13.24□□□□□ -0.29
CDH3-206ENST00000567674 DSCC1Q9BVC3 393 aa13.24□□□□□ -0.29
CDH3-206ENST00000567674 LOC102724159A0A0B4J2E5 919 aa13.23□□□□□ -0.29
CDH3-206ENST00000567674 STAT2P52630 851 aa13.23□□□□□ -0.29
CDH3-206ENST00000567674 PWP2Q15269 919 aaKnown RBP13.23□□□□□ -0.29
CDH3-206ENST00000567674 WDR78Q5VTH9 848 aa13.23□□□□□ -0.29
CDH3-206ENST00000567674 MAMDC4Q6UXC1 1216 aa13.23□□□□□ -0.29
CDH3-206ENST00000567674 ARRDC4Q8NCT1 418 aa13.23□□□□□ -0.29
CDH3-206ENST00000567674 DCAF4Q8WV16 495 aa13.23□□□□□ -0.29
CDH3-206ENST00000567674 RILPL2Q969X0 211 aa13.23□□□□□ -0.29
CDH3-206ENST00000567674 DDX20Q9UHI6 824 aaKnown RBP13.23□□□□□ -0.29
CDH3-206ENST00000567674 CTDP1Q9Y5B0 961 aaPredicted RBP13.23□□□□□ -0.29
CDH3-206ENST00000567674 RAD50Q92878 1312 aa13.22□□□□□ -0.29
CDH3-206ENST00000567674 A0A0D9SFI3 127 aa13.22□□□□□ -0.29
CDH3-206ENST00000567674 ZNF213O14771 459 aa13.22□□□□□ -0.29
CDH3-206ENST00000567674 SEPT4O43236 478 aa13.22□□□□□ -0.29
CDH3-206ENST00000567674 COL6A1P12109 1028 aa13.22□□□□□ -0.29
CDH3-206ENST00000567674 CYBAP13498 195 aa13.22□□□□□ -0.29
CDH3-206ENST00000567674 BMP8BP34820 402 aa13.22□□□□□ -0.29
CDH3-206ENST00000567674 SLC1A4P43007 532 aa13.22□□□□□ -0.29
CDH3-206ENST00000567674 PLS1Q14651 629 aa13.22□□□□□ -0.29
CDH3-206ENST00000567674 ZNF792Q3KQV3 632 aa13.22□□□□□ -0.29
CDH3-206ENST00000567674 AKNAD1Q5T1N1 836 aa13.22□□□□□ -0.29
CDH3-206ENST00000567674 SLFN13Q68D06 897 aa13.22□□□□□ -0.29
CDH3-206ENST00000567674 B4GALNT3Q6L9W6 998 aa13.22□□□□□ -0.29
CDH3-206ENST00000567674 MFSD6Q6ZSS7 791 aa13.22□□□□□ -0.29
CDH3-206ENST00000567674 DGKHQ86XP1 1220 aa13.22□□□□□ -0.29
CDH3-206ENST00000567674 RUFY2Q8WXA3 655 aa13.22□□□□□ -0.29
CDH3-206ENST00000567674 MAML3Q96JK9 1138 aa13.22□□□□□ -0.29
CDH3-206ENST00000567674 FAM227BQ96M60 508 aa13.22□□□□□ -0.29
CDH3-206ENST00000567674 MMP19Q99542 508 aa13.22□□□□□ -0.29
CDH3-206ENST00000567674 C11orf49Q9H6J7 331 aa13.22□□□□□ -0.29
CDH3-206ENST00000567674 PRDM6Q9NQX0 595 aa13.22□□□□□ -0.29
CDH3-206ENST00000567674 DIAPH3Q9NSV4 1193 aa13.22□□□□□ -0.29
CDH3-206ENST00000567674 MTMR10Q9NXD2 777 aa13.22□□□□□ -0.29
CDH3-206ENST00000567674 SYNGAP1Q96PV0 1343 aa13.21□□□□□ -0.29
CDH3-206ENST00000567674 PARP14Q460N5 1801 aa13.21□□□□□ -0.29
CDH3-206ENST00000567674 DNM1LO00429 736 aa13.21□□□□□ -0.29
CDH3-206ENST00000567674 RANBP6O60518 1105 aaKnown RBP13.21□□□□□ -0.29
CDH3-206ENST00000567674 PEX10O60683 326 aa13.21□□□□□ -0.29
CDH3-206ENST00000567674 PRDM1O75626 825 aa13.21□□□□□ -0.29
CDH3-206ENST00000567674 TOP1P11387 765 aaKnown RBP13.21□□□□□ -0.29
CDH3-206ENST00000567674 NMIQ13287 307 aaPredicted RBP13.21□□□□□ -0.29
CDH3-206ENST00000567674 CCL14Q16627 93 aa13.21□□□□□ -0.29
CDH3-206ENST00000567674 BTNL9Q6UXG8 535 aa13.21□□□□□ -0.29
CDH3-206ENST00000567674 CLEC10AQ8IUN9 316 aa13.21□□□□□ -0.29
CDH3-206ENST00000567674 NPLOC4Q8TAT6 608 aa13.21□□□□□ -0.29
CDH3-206ENST00000567674 ESR2Q92731 530 aa13.21□□□□□ -0.29
CDH3-206ENST00000567674 PAWRQ96IZ0 340 aaKnown RBP13.21□□□□□ -0.29
CDH3-206ENST00000567674 CNNM2Q9H8M5 875 aa13.21□□□□□ -0.29
CDH3-206ENST00000567674 IL17RBQ9NRM6 502 aa13.21□□□□□ -0.29
CDH3-206ENST00000567674 FBXO28Q9NVF7 368 aa13.21□□□□□ -0.29
CDH3-206ENST00000567674 DNAJC25-GNG10A0A024R161 153 aa13.2□□□□□ -0.3
CDH3-206ENST00000567674 COBLO75128 1261 aa13.2□□□□□ -0.3
CDH3-206ENST00000567674 TRIM32Q13049 653 aa13.2□□□□□ -0.3
CDH3-206ENST00000567674 LRIT3Q3SXY7 679 aa13.2□□□□□ -0.3
CDH3-206ENST00000567674 FAM47AQ5JRC9 791 aa13.2□□□□□ -0.3
CDH3-206ENST00000567674 VPS53Q5VIR6 699 aa13.2□□□□□ -0.3
CDH3-206ENST00000567674 C1orf53Q5VUE5 145 aa13.2□□□□□ -0.3
CDH3-206ENST00000567674 SNRNP48Q6IEG0 339 aaKnown RBP13.2□□□□□ -0.3
CDH3-206ENST00000567674 CCDC129Q6ZRS4 1044 aa13.2□□□□□ -0.3
CDH3-206ENST00000567674 Q7L0L9 218 aa13.2□□□□□ -0.3
CDH3-206ENST00000567674 IQCA1Q86XH1 822 aa13.2□□□□□ -0.3
CDH3-206ENST00000567674 ANKS1AQ92625 1134 aa13.2□□□□□ -0.3
CDH3-206ENST00000567674 TINF2Q9BSI4 451 aa13.2□□□□□ -0.3
CDH3-206ENST00000567674 FLRT1Q9NZU1 646 aa13.2□□□□□ -0.3
CDH3-206ENST00000567674 STX8Q9UNK0 236 aa13.2□□□□□ -0.3
CDH3-206ENST00000567674 RAD21O60216 631 aa13.19□□□□□ -0.3
CDH3-206ENST00000567674 CTDSPL2Q05D32 466 aa13.19□□□□□ -0.3
CDH3-206ENST00000567674 IMMTQ16891 758 aaKnown RBP13.19□□□□□ -0.3
CDH3-206ENST00000567674 GPATCH4Q5T3I0 446 aaKnown RBP13.19□□□□□ -0.3
CDH3-206ENST00000567674 ZNF589Q86UQ0 364 aaPredicted RBP13.19□□□□□ -0.3
CDH3-206ENST00000567674 DDX11Q96FC9 970 aa13.19□□□□□ -0.3
CDH3-206ENST00000567674 GDF15Q99988 308 aa13.19□□□□□ -0.3
CDH3-206ENST00000567674 PFASO15067 1338 aa13.18□□□□□ -0.3
CDH3-206ENST00000567674 MYH4Q9Y623 1939 aa13.18□□□□□ -0.3
CDH3-206ENST00000567674 TMEM232C9JQI7 657 aa13.18□□□□□ -0.3
CDH3-206ENST00000567674 SNHG28P0DPA3 235 aa13.18□□□□□ -0.3
CDH3-206ENST00000567674 CCND3P30281 292 aaPredicted RBP13.18□□□□□ -0.3
CDH3-206ENST00000567674 TTC22Q5TAA0 569 aa13.18□□□□□ -0.3
CDH3-206ENST00000567674 CWC27Q6UX04 472 aaKnown RBP13.18□□□□□ -0.3
CDH3-206ENST00000567674 KIFC2Q96AC6 838 aa13.18□□□□□ -0.3
CDH3-206ENST00000567674 KRT23Q9C075 422 aa13.18□□□□□ -0.3
CDH3-206ENST00000567674 ACAD9Q9H845 621 aa13.18□□□□□ -0.3
CDH3-206ENST00000567674 CNPY2Q9Y2B0 182 aa13.18□□□□□ -0.3
CDH3-206ENST00000567674 MCCP23508 829 aa13.17□□□□□ -0.3
CDH3-206ENST00000567674 CYP2C19P33261 490 aa13.17□□□□□ -0.3
CDH3-206ENST00000567674 STK11IPQ8N1F8 1099 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms