RNA–Protein interactions for RNA: ENST00000567284.6

FANCA-223, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-223	ENST00000567284	ADGRF4	Q8IZF3	695 aa		10.88	□□□□□ -0.67
FANCA-223	ENST00000567284	NSUN7	Q8NE18	718 aa	Known RBP	10.88	□□□□□ -0.67
FANCA-223	ENST00000567284	CHURC1	Q8WUH1	139 aa		10.88	□□□□□ -0.67
FANCA-223	ENST00000567284	C12orf42	Q96LP6	360 aa		10.88	□□□□□ -0.67
FANCA-223	ENST00000567284	CREBZF	Q9NS37	354 aa		10.88	□□□□□ -0.67
FANCA-223	ENST00000567284	ORC3	Q9UBD5	711 aa	Predicted RBP	10.88	□□□□□ -0.67
FANCA-223	ENST00000567284	FEM1B	Q9UK73	627 aa		10.88	□□□□□ -0.67
FANCA-223	ENST00000567284	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	10.88	□□□□□ -0.67
FANCA-223	ENST00000567284	CTDP1	Q9Y5B0	961 aa	Predicted RBP	10.88	□□□□□ -0.67
FANCA-223	ENST00000567284		V9GY48	417 aa	Predicted RBP	10.88	□□□□□ -0.67
FANCA-223	ENST00000567284	CNTNAP5	Q8WYK1	1306 aa		10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	USP17L15	C9J2P7	530 aa		10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	USP17L13	C9JLJ4	530 aa		10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	USP17L11	C9JVI0	530 aa		10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	USP17L18	D6R9N7	530 aa		10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	USP17L22	D6RA61	530 aa		10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	USP17L17	D6RBQ6	530 aa		10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	USP17L19	D6RCP7	530 aa		10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	USP17L20	D6RJB6	530 aa		10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	AOC2	O75106	756 aa		10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	OSBP	P22059	807 aa		10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	GJB2	P29033	226 aa		10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	IRX3	P78415	501 aa	Predicted RBP	10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	USP17L24	Q0WX57	530 aa		10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	PPP2R5B	Q15173	497 aa		10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	SLC35G1	Q2M3R5	365 aa		10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	CATSPERG	Q6ZRH7	1159 aa		10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	FAM160B2	Q86V87	743 aa		10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	TRIM22	Q8IYM9	498 aa		10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	FAM184A	Q8NB25	1140 aa		10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	BRI3BP	Q8WY22	251 aa		10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	CCDC102A	Q96A19	550 aa		10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	RRP36	Q96EU6	259 aa	Known RBP	10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	MS4A4A	Q96JQ5	239 aa		10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	CAPNS2	Q96L46	248 aa		10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	IPO9	Q96P70	1041 aa	Known RBP	10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	PIGS	Q96S52	555 aa		10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	SLF1	Q9BQI6	1058 aa		10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	LZTS2	Q9BRK4	669 aa		10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	PRR12	Q9ULL5	1215 aa		10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	AGTPBP1	Q9UPW5	1226 aa		10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	ZNFX1	Q9P2E3	1918 aa	Known RBP	10.87	□□□□□ -0.67
FANCA-223	ENST00000567284	MANSC4	A6NHS7	340 aa	Predicted RBP	10.86	□□□□□ -0.67
FANCA-223	ENST00000567284	FAM155A	B1AL88	458 aa	Predicted RBP	10.86	□□□□□ -0.67
FANCA-223	ENST00000567284	BTBD19	C9JJ37	291 aa		10.86	□□□□□ -0.67
FANCA-223	ENST00000567284	PDHX	O00330	501 aa		10.86	□□□□□ -0.67
FANCA-223	ENST00000567284	CYTH3	O43739	400 aa		10.86	□□□□□ -0.67
FANCA-223	ENST00000567284	FMNL1	O95466	1100 aa	Predicted RBP	10.86	□□□□□ -0.67
FANCA-223	ENST00000567284	IFNAR1	P17181	557 aa		10.86	□□□□□ -0.67
FANCA-223	ENST00000567284	TAL1	P17542	331 aa	Predicted RBP	10.86	□□□□□ -0.67
FANCA-223	ENST00000567284	KIF23	Q02241	960 aa	Predicted RBP	10.86	□□□□□ -0.67
FANCA-223	ENST00000567284	MOGS	Q13724	837 aa		10.86	□□□□□ -0.67
FANCA-223	ENST00000567284	NTRK3	Q16288	839 aa		10.86	□□□□□ -0.67
FANCA-223	ENST00000567284	CDC37	Q16543	378 aa	Predicted RBP	10.86	□□□□□ -0.67
FANCA-223	ENST00000567284	GPAT2	Q6NUI2	795 aa		10.86	□□□□□ -0.67
FANCA-223	ENST00000567284	AIFM3	Q96NN9	605 aa		10.86	□□□□□ -0.67
FANCA-223	ENST00000567284	ZIC5	Q96T25	663 aa		10.86	□□□□□ -0.67
FANCA-223	ENST00000567284	LLPH	Q9BRT6	129 aa	Known RBP	10.86	□□□□□ -0.67
FANCA-223	ENST00000567284	JMJD4	Q9H9V9	463 aa		10.86	□□□□□ -0.67
FANCA-223	ENST00000567284	SEC63	Q9UGP8	760 aa	Known RBP	10.86	□□□□□ -0.67
FANCA-223	ENST00000567284	RBBP6	Q7Z6E9	1792 aa	Known RBP	10.85	□□□□□ -0.67
FANCA-223	ENST00000567284	PRPF3	O43395	683 aa	Known RBP	10.85	□□□□□ -0.67
FANCA-223	ENST00000567284	ZBED4	O75132	1171 aa		10.85	□□□□□ -0.67
FANCA-223	ENST00000567284	GUCY1B3	Q02153	619 aa		10.85	□□□□□ -0.67
FANCA-223	ENST00000567284	FUT2	Q10981	343 aa		10.85	□□□□□ -0.67
FANCA-223	ENST00000567284	PABPC4	Q13310	644 aa	Known RBP eCLIP	10.85	□□□□□ -0.67
FANCA-223	ENST00000567284	COG2	Q14746	738 aa		10.85	□□□□□ -0.67
FANCA-223	ENST00000567284	USH1G	Q495M9	461 aa		10.85	□□□□□ -0.67
FANCA-223	ENST00000567284	BTNL9	Q6UXG8	535 aa		10.85	□□□□□ -0.67
FANCA-223	ENST00000567284	HEATR3	Q7Z4Q2	680 aa		10.85	□□□□□ -0.67
FANCA-223	ENST00000567284	CPXCR1	Q8N123	301 aa		10.85	□□□□□ -0.67
FANCA-223	ENST00000567284	FAM43A	Q8N2R8	423 aa		10.85	□□□□□ -0.67
FANCA-223	ENST00000567284	SMARCC2	Q8TAQ2	1214 aa		10.85	□□□□□ -0.67
FANCA-223	ENST00000567284	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	10.85	□□□□□ -0.67
FANCA-223	ENST00000567284	ATG4C	Q96DT6	458 aa		10.85	□□□□□ -0.67
FANCA-223	ENST00000567284	HHIPL1	Q96JK4	782 aa		10.85	□□□□□ -0.67
FANCA-223	ENST00000567284	SPZ1	Q9BXG8	430 aa		10.85	□□□□□ -0.67
FANCA-223	ENST00000567284	ASCC2	Q9H1I8	757 aa	Predicted RBP	10.85	□□□□□ -0.67
FANCA-223	ENST00000567284	RIOX1	Q9H6W3	641 aa		10.85	□□□□□ -0.67
FANCA-223	ENST00000567284	PPP1R9A	Q9ULJ8	1098 aa		10.85	□□□□□ -0.67
FANCA-223	ENST00000567284		A0A0G2JMZ2	1700 aa		10.84	□□□□□ -0.67
FANCA-223	ENST00000567284	MYH15	Q9Y2K3	1946 aa		10.84	□□□□□ -0.67
FANCA-223	ENST00000567284	RASSF10	A6NK89	507 aa		10.84	□□□□□ -0.67
FANCA-223	ENST00000567284	PEX10	O60683	326 aa		10.84	□□□□□ -0.67
FANCA-223	ENST00000567284	DEXI	O95424	95 aa		10.84	□□□□□ -0.67
FANCA-223	ENST00000567284	CYP2C8	P10632	490 aa		10.84	□□□□□ -0.67
FANCA-223	ENST00000567284	FDPS	P14324	419 aa	Known RBP	10.84	□□□□□ -0.67
FANCA-223	ENST00000567284	DSG3	P32926	999 aa		10.84	□□□□□ -0.67
FANCA-223	ENST00000567284	HMGN5	P82970	282 aa	Known RBP	10.84	□□□□□ -0.67
FANCA-223	ENST00000567284	PLS1	Q14651	629 aa		10.84	□□□□□ -0.67
FANCA-223	ENST00000567284	QRICH1	Q2TAL8	776 aa		10.84	□□□□□ -0.67
FANCA-223	ENST00000567284	OTUD7B	Q6GQQ9	843 aa		10.84	□□□□□ -0.67
FANCA-223	ENST00000567284	PRPF38A	Q8NAV1	312 aa	Known RBP	10.84	□□□□□ -0.67
FANCA-223	ENST00000567284	COA7	Q96BR5	231 aa		10.84	□□□□□ -0.67
FANCA-223	ENST00000567284	INTS4	Q96HW7	963 aa	Known RBP	10.84	□□□□□ -0.67
FANCA-223	ENST00000567284	P2RX7	Q99572	595 aa	Known RBP	10.84	□□□□□ -0.67
FANCA-223	ENST00000567284	PTPN18	Q99952	460 aa		10.84	□□□□□ -0.67
FANCA-223	ENST00000567284	ALG1	Q9BT22	464 aa		10.84	□□□□□ -0.67
FANCA-223	ENST00000567284	PAGR1	Q9BTK6	254 aa		10.84	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms