RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 KANSL2Q9H9L4 492 aa18.62■□□□□ 0.57
PALB2-205ENST00000567003 DIS3Q9Y2L1 958 aaKnown RBP18.62■□□□□ 0.57
PALB2-205ENST00000567003 RIPK3Q9Y572 518 aa18.62■□□□□ 0.57
PALB2-205ENST00000567003 ZBED9Q6R2W3 1325 aa18.62■□□□□ 0.57
PALB2-205ENST00000567003 SNAI1O95863 264 aaPredicted RBP18.61■□□□□ 0.57
PALB2-205ENST00000567003 ATP5JP18859 108 aa18.61■□□□□ 0.57
PALB2-205ENST00000567003 ACLYP53396 1101 aa18.61■□□□□ 0.57
PALB2-205ENST00000567003 GRIN2CQ14957 1233 aa18.61■□□□□ 0.57
PALB2-205ENST00000567003 SNRNP48Q6IEG0 339 aaKnown RBP18.61■□□□□ 0.57
PALB2-205ENST00000567003 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.61■□□□□ 0.57
PALB2-205ENST00000567003 STARD7Q9NQZ5 370 aa18.61■□□□□ 0.57
PALB2-205ENST00000567003 ZHX1Q9UKY1 873 aaPredicted RBP18.61■□□□□ 0.57
PALB2-205ENST00000567003 CNPY2Q9Y2B0 182 aa18.61■□□□□ 0.57
PALB2-205ENST00000567003 ADCY6O43306 1168 aa18.6■□□□□ 0.57
PALB2-205ENST00000567003 SLF1Q9BQI6 1058 aa18.6■□□□□ 0.57
PALB2-205ENST00000567003 COG6Q9Y2V7 657 aa18.6■□□□□ 0.57
PALB2-205ENST00000567003 CHD9Q3L8U1 2897 aa18.6■□□□□ 0.57
PALB2-205ENST00000567003 MYH4Q9Y623 1939 aa18.59■□□□□ 0.57
PALB2-205ENST00000567003 HMMRO75330 724 aa18.59■□□□□ 0.57
PALB2-205ENST00000567003 DNAJB2P25686 324 aa18.59■□□□□ 0.57
PALB2-205ENST00000567003 UBE3CQ15386 1083 aa18.59■□□□□ 0.57
PALB2-205ENST00000567003 KCNA10Q16322 511 aa18.59■□□□□ 0.57
PALB2-205ENST00000567003 RPAP2Q8IXW5 612 aaPredicted RBP18.59■□□□□ 0.57
PALB2-205ENST00000567003 KLHDC9Q8NEP7 349 aa18.59■□□□□ 0.57
PALB2-205ENST00000567003 DDRGK1Q96HY6 314 aa18.59■□□□□ 0.57
PALB2-205ENST00000567003 MYO9BQ13459 2157 aa18.58■□□□□ 0.57
PALB2-205ENST00000567003 SMARCA5O60264 1052 aaPredicted RBP18.58■□□□□ 0.56
PALB2-205ENST00000567003 RAB11FIP3O75154 756 aa18.58■□□□□ 0.56
PALB2-205ENST00000567003 NDUFB10O96000 172 aa18.58■□□□□ 0.56
PALB2-205ENST00000567003 RASA1P20936 1047 aa18.58■□□□□ 0.56
PALB2-205ENST00000567003 COPB2P35606 906 aa18.58■□□□□ 0.56
PALB2-205ENST00000567003 CCSAPQ6IQ19 270 aaPredicted RBP18.58■□□□□ 0.56
PALB2-205ENST00000567003 ANKRD33Q7Z3H0 272 aa18.58■□□□□ 0.56
PALB2-205ENST00000567003 CPXCR1Q8N123 301 aa18.58■□□□□ 0.56
PALB2-205ENST00000567003 DDX11Q96FC9 970 aa18.58■□□□□ 0.56
PALB2-205ENST00000567003 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.58■□□□□ 0.562e-6■■□□□ 14.2
PALB2-205ENST00000567003 TSEN34Q9BSV6 310 aaKnown RBP18.58■□□□□ 0.56
PALB2-205ENST00000567003 TEX13BQ9BXU2 312 aa18.58■□□□□ 0.56
PALB2-205ENST00000567003 ZBTB40Q9NUA8 1239 aa18.58■□□□□ 0.56
PALB2-205ENST00000567003 FAM184BQ9ULE4 1060 aa18.58■□□□□ 0.56
PALB2-205ENST00000567003 SYNGAP1Q96PV0 1343 aa18.57■□□□□ 0.56
PALB2-205ENST00000567003 TMEM265A0A087WTH1 108 aa18.57■□□□□ 0.56
PALB2-205ENST00000567003 GRXCR1A8MXD5 290 aa18.57■□□□□ 0.56
PALB2-205ENST00000567003 DCDC2CA8MYV0 355 aa18.57■□□□□ 0.56
PALB2-205ENST00000567003 FGD4Q96M96 766 aa18.57■□□□□ 0.56
PALB2-205ENST00000567003 RAVER2Q9HCJ3 691 aaKnown RBP18.57■□□□□ 0.56
PALB2-205ENST00000567003 PRDM6Q9NQX0 595 aa18.57■□□□□ 0.56
PALB2-205ENST00000567003 TBX21Q9UL17 535 aa18.57■□□□□ 0.56
PALB2-205ENST00000567003 DNAJC25-GNG10A0A024R161 153 aa18.56■□□□□ 0.56
PALB2-205ENST00000567003 MINDY4BA8MYZ0 360 aa18.56■□□□□ 0.56
PALB2-205ENST00000567003 F5H6K3 240 aa18.56■□□□□ 0.56
PALB2-205ENST00000567003 TIMP1P01033 207 aa18.56■□□□□ 0.56
PALB2-205ENST00000567003 PBX2P40425 430 aa18.56■□□□□ 0.56
PALB2-205ENST00000567003 KLRC3Q07444 240 aa18.56■□□□□ 0.56
PALB2-205ENST00000567003 NUP133Q8WUM0 1156 aa18.56■□□□□ 0.56
PALB2-205ENST00000567003 KIFC2Q96AC6 838 aa18.56■□□□□ 0.56
PALB2-205ENST00000567003 TIFAQ96CG3 184 aa18.56■□□□□ 0.56
PALB2-205ENST00000567003 TOX2Q96NM4 488 aa18.56■□□□□ 0.56
PALB2-205ENST00000567003 ARPP21Q9UBL0 812 aaPredicted RBP18.56■□□□□ 0.56
PALB2-205ENST00000567003 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.55■□□□□ 0.56
PALB2-205ENST00000567003 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.55■□□□□ 0.56
PALB2-205ENST00000567003 MOXD2PA6NHM9 499 aa18.55■□□□□ 0.56
PALB2-205ENST00000567003 C6orf222P0C671 652 aaPredicted RBP18.55■□□□□ 0.56
PALB2-205ENST00000567003 ACRP10323 421 aa18.55■□□□□ 0.56
PALB2-205ENST00000567003 ACVR2BQ13705 512 aa18.55■□□□□ 0.56
PALB2-205ENST00000567003 MAMDC4Q6UXC1 1216 aa18.55■□□□□ 0.56
PALB2-205ENST00000567003 C16orf59Q7L2K0 433 aa18.55■□□□□ 0.56
PALB2-205ENST00000567003 STRBPQ96SI9 672 aaKnown RBP18.55■□□□□ 0.56
PALB2-205ENST00000567003 PPP1R12CQ9BZL4 782 aa18.55■□□□□ 0.56
PALB2-205ENST00000567003 ZNF576Q9H609 170 aa18.55■□□□□ 0.56
PALB2-205ENST00000567003 MKNK2Q9HBH9 465 aa18.55■□□□□ 0.56
PALB2-205ENST00000567003 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.55■□□□□ 0.56
PALB2-205ENST00000567003 CLIP2Q9UDT6 1046 aa18.55■□□□□ 0.56
PALB2-205ENST00000567003 GSG1L2A8MUP6 293 aa18.54■□□□□ 0.56
PALB2-205ENST00000567003 DUSP11O75319 330 aaKnown RBP18.54■□□□□ 0.56
PALB2-205ENST00000567003 PRDM1O75626 825 aa18.54■□□□□ 0.56
PALB2-205ENST00000567003 ASGR1P07306 291 aa18.54■□□□□ 0.56
PALB2-205ENST00000567003 CCDC144BQ3MJ40 725 aa18.54■□□□□ 0.56
PALB2-205ENST00000567003 TMEM240Q5SV17 173 aa18.54■□□□□ 0.56
PALB2-205ENST00000567003 LRRC47Q8N1G4 583 aaKnown RBP18.54■□□□□ 0.56
PALB2-205ENST00000567003 MSL3Q8N5Y2 521 aaKnown RBP18.54■□□□□ 0.56
PALB2-205ENST00000567003 PPM1EQ8WY54 764 aa18.54■□□□□ 0.56
PALB2-205ENST00000567003 VTI1AQ96AJ9 217 aa18.54■□□□□ 0.56
PALB2-205ENST00000567003 CHMP4CQ96CF2 233 aa18.54■□□□□ 0.56
PALB2-205ENST00000567003 EPB41L4AQ9HCS5 686 aaPredicted RBP18.54■□□□□ 0.56
PALB2-205ENST00000567003 NYAP2Q9P242 653 aa18.54■□□□□ 0.56
PALB2-205ENST00000567003 DDX19BQ9UMR2 479 aa18.54■□□□□ 0.56
PALB2-205ENST00000567003 CHD7Q9P2D1 2997 aa18.54■□□□□ 0.56
PALB2-205ENST00000567003 ZBED4O75132 1171 aa18.53■□□□□ 0.56
PALB2-205ENST00000567003 CSF2RAP15509 400 aa18.53■□□□□ 0.56
PALB2-205ENST00000567003 PTGS1P23219 599 aa18.53■□□□□ 0.56
PALB2-205ENST00000567003 CDK7P50613 346 aa18.53■□□□□ 0.56
PALB2-205ENST00000567003 SBK1Q52WX2 424 aa18.53■□□□□ 0.56
PALB2-205ENST00000567003 TSHZ3Q63HK5 1081 aa18.53■□□□□ 0.56
PALB2-205ENST00000567003 MFSD5Q6N075 450 aa18.53■□□□□ 0.56
PALB2-205ENST00000567003 ZSCAN25Q6NSZ9 544 aa18.53■□□□□ 0.56
PALB2-205ENST00000567003 ANKRD35Q8N283 1001 aa18.53■□□□□ 0.56
PALB2-205ENST00000567003 PRPF38AQ8NAV1 312 aaKnown RBP18.53■□□□□ 0.56
PALB2-205ENST00000567003 OSBP2Q969R2 916 aa18.53■□□□□ 0.56
PALB2-205ENST00000567003 GLT1D1Q96MS3 346 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms