RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 KIFC2Q96AC6 838 aa22.22■■□□□ 1.15
IFT140-208ENST00000566818 TOMM22Q9NS69 142 aa22.22■■□□□ 1.15
IFT140-208ENST00000566818 DDX20Q9UHI6 824 aaKnown RBP22.22■■□□□ 1.15
IFT140-208ENST00000566818 FGAP02671 866 aa22.21■■□□□ 1.15
IFT140-208ENST00000566818 CYBAP13498 195 aa22.21■■□□□ 1.15
IFT140-208ENST00000566818 GMCL1Q96IK5 515 aa22.21■■□□□ 1.15
IFT140-208ENST00000566818 MAML3Q96JK9 1138 aa22.21■■□□□ 1.15
IFT140-208ENST00000566818 CEP290O15078 2479 aa22.21■■□□□ 1.15
IFT140-208ENST00000566818 ATP2A1O14983 1001 aa22.2■■□□□ 1.14
IFT140-208ENST00000566818 IGHA2P01877 340 aa22.2■■□□□ 1.14
IFT140-208ENST00000566818 FDX1P10109 184 aa22.2■■□□□ 1.14
IFT140-208ENST00000566818 SLC1A4P43007 532 aa22.2■■□□□ 1.14
IFT140-208ENST00000566818 IKQ13123 557 aaPredicted RBP22.2■■□□□ 1.14
IFT140-208ENST00000566818 FAM160B2Q86V87 743 aa22.2■■□□□ 1.14
IFT140-208ENST00000566818 PCP11498 1178 aaKnown RBP22.19■■□□□ 1.14
IFT140-208ENST00000566818 MNX1P50219 401 aaPredicted RBP22.19■■□□□ 1.14
IFT140-208ENST00000566818 STAT2P52630 851 aa22.19■■□□□ 1.14
IFT140-208ENST00000566818 OAZ1P54368 228 aa22.19■■□□□ 1.14
IFT140-208ENST00000566818 SLC38A10Q9HBR0 1119 aa22.19■■□□□ 1.14
IFT140-208ENST00000566818 COLQQ9Y215 455 aaPredicted RBP22.19■■□□□ 1.14
IFT140-208ENST00000566818 TMEM232C9JQI7 657 aa22.18■■□□□ 1.14
IFT140-208ENST00000566818 FGRP09769 529 aa22.18■■□□□ 1.14
IFT140-208ENST00000566818 RRP12Q5JTH9 1297 aaKnown RBP22.18■■□□□ 1.14
IFT140-208ENST00000566818 CHRDL2Q6WN34 429 aa22.18■■□□□ 1.14
IFT140-208ENST00000566818 CPXCR1Q8N123 301 aa22.18■■□□□ 1.14
IFT140-208ENST00000566818 TRPV1Q8NER1 839 aa22.18■■□□□ 1.14
IFT140-208ENST00000566818 CHURC1Q8WUH1 139 aa22.18■■□□□ 1.14
IFT140-208ENST00000566818 INCENPQ9NQS7 918 aa22.18■■□□□ 1.14
IFT140-208ENST00000566818 FBXO40Q9UH90 709 aa22.18■■□□□ 1.14
IFT140-208ENST00000566818 NRBP1Q9UHY1 535 aa22.18■■□□□ 1.14
IFT140-208ENST00000566818 DIS3Q9Y2L1 958 aaKnown RBP22.18■■□□□ 1.14
IFT140-208ENST00000566818 ALPK3Q96L96 1907 aa22.18■■□□□ 1.14
IFT140-208ENST00000566818 SEPT4O43236 478 aa22.17■■□□□ 1.14
IFT140-208ENST00000566818 PGK2P07205 417 aa22.17■■□□□ 1.14
IFT140-208ENST00000566818 C7orf61Q8IZ16 206 aa22.17■■□□□ 1.14
IFT140-208ENST00000566818 RNF41Q9H4P4 317 aaPredicted RBP22.17■■□□□ 1.14
IFT140-208ENST00000566818 IL17RBQ9NRM6 502 aa22.17■■□□□ 1.14
IFT140-208ENST00000566818 ZNFX1Q9P2E3 1918 aaKnown RBP22.16■■□□□ 1.14
IFT140-208ENST00000566818 PLXNA1Q9UIW2 1896 aa22.16■■□□□ 1.14
IFT140-208ENST00000566818 PFASO15067 1338 aa22.16■■□□□ 1.14
IFT140-208ENST00000566818 NMT2O60551 498 aa22.16■■□□□ 1.14
IFT140-208ENST00000566818 MCCP23508 829 aa22.16■■□□□ 1.14
IFT140-208ENST00000566818 SLC4A3P48751 1232 aa22.16■■□□□ 1.14
IFT140-208ENST00000566818 HAND2P61296 217 aa22.16■■□□□ 1.14
IFT140-208ENST00000566818 IRX6P78412 446 aaPredicted RBP22.16■■□□□ 1.14
IFT140-208ENST00000566818 ZNF792Q3KQV3 632 aa22.16■■□□□ 1.14
IFT140-208ENST00000566818 CWC27Q6UX04 472 aaKnown RBP22.16■■□□□ 1.14
IFT140-208ENST00000566818 STAG1Q8WVM7 1258 aa22.16■■□□□ 1.14
IFT140-208ENST00000566818 DDX11Q96FC9 970 aa22.16■■□□□ 1.14
IFT140-208ENST00000566818 RAVER2Q9HCJ3 691 aaKnown RBP22.16■■□□□ 1.14
IFT140-208ENST00000566818 TACC3Q9Y6A5 838 aa22.16■■□□□ 1.14
IFT140-208ENST00000566818 LAMA4Q16363 1823 aa22.15■■□□□ 1.14
IFT140-208ENST00000566818 PLA2G6O60733 806 aa22.15■■□□□ 1.14
IFT140-208ENST00000566818 COL6A1P12109 1028 aa22.15■■□□□ 1.14
IFT140-208ENST00000566818 NT5C2P49902 561 aa22.15■■□□□ 1.14
IFT140-208ENST00000566818 AKNAD1Q5T1N1 836 aa22.15■■□□□ 1.14
IFT140-208ENST00000566818 MFSD6Q6ZSS7 791 aa22.15■■□□□ 1.14
IFT140-208ENST00000566818 CHST13Q8NET6 341 aa22.15■■□□□ 1.14
IFT140-208ENST00000566818 DCAF4Q8WV16 495 aa22.15■■□□□ 1.14
IFT140-208ENST00000566818 TINF2Q9BSI4 451 aa22.15■■□□□ 1.14
IFT140-208ENST00000566818 DNM1LO00429 736 aa22.14■■□□□ 1.13
IFT140-208ENST00000566818 NOVP48745 357 aa22.14■■□□□ 1.13
IFT140-208ENST00000566818 CCDC96Q2M329 555 aa22.14■■□□□ 1.13
IFT140-208ENST00000566818 RCSD1Q6JBY9 416 aa22.14■■□□□ 1.13
IFT140-208ENST00000566818 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.14■■□□□ 1.13
IFT140-208ENST00000566818 MSL3Q8N5Y2 521 aaKnown RBP22.14■■□□□ 1.13
IFT140-208ENST00000566818 ARRDC4Q8NCT1 418 aa22.14■■□□□ 1.13
IFT140-208ENST00000566818 TCP11L1Q9NUJ3 509 aa22.14■■□□□ 1.13
IFT140-208ENST00000566818 CNPY2Q9Y2B0 182 aa22.14■■□□□ 1.13
IFT140-208ENST00000566818 RIPK3Q9Y572 518 aa22.14■■□□□ 1.13
IFT140-208ENST00000566818 KBTBD13C9JR72 458 aa22.13■■□□□ 1.13
IFT140-208ENST00000566818 ZNF213O14771 459 aa22.13■■□□□ 1.13
IFT140-208ENST00000566818 TOP1P11387 765 aaKnown RBP22.13■■□□□ 1.13
IFT140-208ENST00000566818 KCTD1Q719H9 257 aa22.13■■□□□ 1.13
IFT140-208ENST00000566818 ANKRD35Q8N283 1001 aa22.13■■□□□ 1.13
IFT140-208ENST00000566818 MTMR7Q9Y216 660 aa22.13■■□□□ 1.13
IFT140-208ENST00000566818 TKFCQ3LXA3 575 aa22.12■■□□□ 1.13
IFT140-208ENST00000566818 TTC22Q5TAA0 569 aa22.12■■□□□ 1.13
IFT140-208ENST00000566818 TBC1D10CQ8IV04 446 aa22.12■■□□□ 1.13
IFT140-208ENST00000566818 ESR2Q92731 530 aa22.12■■□□□ 1.13
IFT140-208ENST00000566818 CHMP4CQ96CF2 233 aa22.12■■□□□ 1.13
IFT140-208ENST00000566818 DSCC1Q9BVC3 393 aa22.12■■□□□ 1.13
IFT140-208ENST00000566818 ACAD9Q9H845 621 aa22.12■■□□□ 1.13
IFT140-208ENST00000566818 SYNGAP1Q96PV0 1343 aa22.11■■□□□ 1.13
IFT140-208ENST00000566818 PRAMEF19Q5SWL8 479 aa22.11■■□□□ 1.13
IFT140-208ENST00000566818 TMEM47Q9BQJ4 181 aa22.11■■□□□ 1.13
IFT140-208ENST00000566818 HOMER2Q9NSB8 354 aa22.11■■□□□ 1.13
IFT140-208ENST00000566818 CTNNA3Q9UI47 895 aa22.11■■□□□ 1.13
IFT140-208ENST00000566818 DNAJC25-GNG10A0A024R161 153 aa22.1■■□□□ 1.13
IFT140-208ENST00000566818 RARBP10826 455 aa22.1■■□□□ 1.13
IFT140-208ENST00000566818 PDE4AP27815 886 aa22.1■■□□□ 1.13
IFT140-208ENST00000566818 ANO1Q5XXA6 986 aa22.1■■□□□ 1.13
IFT140-208ENST00000566818 ZNF467Q7Z7K2 595 aaPredicted RBP22.1■■□□□ 1.13
IFT140-208ENST00000566818 SENP6Q9GZR1 1112 aaPredicted RBP22.1■■□□□ 1.13
IFT140-208ENST00000566818 PRR12Q9ULL5 1215 aa22.1■■□□□ 1.13
IFT140-208ENST00000566818 ZMYND8Q9ULU4 1186 aaPredicted RBP22.1■■□□□ 1.13
IFT140-208ENST00000566818 NEDD4P46934 1319 aa22.09■■□□□ 1.13
IFT140-208ENST00000566818 RAD50Q92878 1312 aa22.09■■□□□ 1.13
IFT140-208ENST00000566818 AKR1A1P14550 325 aa22.09■■□□□ 1.13
IFT140-208ENST00000566818 IMMTQ16891 758 aaKnown RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms