RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 FRMPD3Q5JV73 1810 aa17.85■□□□□ 0.45
RNF40-209ENST00000566703 SNRNP48Q6IEG0 339 aaKnown RBP17.85■□□□□ 0.45
RNF40-209ENST00000566703 MAMDC4Q6UXC1 1216 aa17.85■□□□□ 0.45
RNF40-209ENST00000566703 ZNF467Q7Z7K2 595 aaPredicted RBP17.85■□□□□ 0.45
RNF40-209ENST00000566703 SYNGAP1Q96PV0 1343 aa17.85■□□□□ 0.45
RNF40-209ENST00000566703 FSD1Q9BTV5 496 aa17.85■□□□□ 0.45
RNF40-209ENST00000566703 NAPBQ9H115 298 aa17.85■□□□□ 0.45
RNF40-209ENST00000566703 SLC38A10Q9HBR0 1119 aa17.85■□□□□ 0.45
RNF40-209ENST00000566703 CNPY2Q9Y2B0 182 aa17.85■□□□□ 0.45
RNF40-209ENST00000566703 GREB1LQ9C091 1923 aaPredicted RBP17.84■□□□□ 0.45
RNF40-209ENST00000566703 PLIN4Q96Q06 1357 aa17.84■□□□□ 0.45
RNF40-209ENST00000566703 PRDM1O75626 825 aa17.84■□□□□ 0.45
RNF40-209ENST00000566703 MYCNP04198 464 aaPredicted RBP17.84■□□□□ 0.45
RNF40-209ENST00000566703 TSPY3P0CV98 308 aa17.84■□□□□ 0.45
RNF40-209ENST00000566703 TSPY8P0CW00 308 aa17.84■□□□□ 0.45
RNF40-209ENST00000566703 MX1P20591 662 aa17.84■□□□□ 0.45
RNF40-209ENST00000566703 FAM109BQ6ICB4 259 aaPredicted RBP17.84■□□□□ 0.45
RNF40-209ENST00000566703 CHST13Q8NET6 341 aa17.84■□□□□ 0.45
RNF40-209ENST00000566703 TSEN34Q9BSV6 310 aaKnown RBP17.84■□□□□ 0.45
RNF40-209ENST00000566703 MTMR10Q9NXD2 777 aa17.84■□□□□ 0.45
RNF40-209ENST00000566703 FBXO40Q9UH90 709 aa17.84■□□□□ 0.45
RNF40-209ENST00000566703 RIPK3Q9Y572 518 aa17.84■□□□□ 0.45
RNF40-209ENST00000566703 PARP14Q460N5 1801 aa17.84■□□□□ 0.45
RNF40-209ENST00000566703 BMP3P12645 472 aa17.83■□□□□ 0.44
RNF40-209ENST00000566703 TAL1P17542 331 aaPredicted RBP17.83■□□□□ 0.44
RNF40-209ENST00000566703 TFAP4Q01664 338 aa17.83■□□□□ 0.44
RNF40-209ENST00000566703 PPARAQ07869 468 aa17.83■□□□□ 0.44
RNF40-209ENST00000566703 TRIM60Q495X7 471 aa17.83■□□□□ 0.44
RNF40-209ENST00000566703 SLFN13Q68D06 897 aa17.83■□□□□ 0.44
RNF40-209ENST00000566703 TICAM2Q86XR7 235 aa17.83■□□□□ 0.44
RNF40-209ENST00000566703 CPXCR1Q8N123 301 aa17.83■□□□□ 0.44
RNF40-209ENST00000566703 SLC17A8Q8NDX2 589 aa17.83■□□□□ 0.44
RNF40-209ENST00000566703 KIFC2Q96AC6 838 aa17.83■□□□□ 0.44
RNF40-209ENST00000566703 SEC62Q99442 399 aaKnown RBP17.83■□□□□ 0.44
RNF40-209ENST00000566703 ZBTB47Q9UFB7 747 aaPredicted RBP17.83■□□□□ 0.44
RNF40-209ENST00000566703 FAM184BQ9ULE4 1060 aa17.83■□□□□ 0.44
RNF40-209ENST00000566703 STXBP5LQ9Y2K9 1186 aa17.83■□□□□ 0.44
RNF40-209ENST00000566703 TACC3Q9Y6A5 838 aa17.83■□□□□ 0.44
RNF40-209ENST00000566703 ZNFX1Q9P2E3 1918 aaKnown RBP17.82■□□□□ 0.44
RNF40-209ENST00000566703 POTEB2H3BUK9 544 aa17.82■□□□□ 0.44
RNF40-209ENST00000566703 PLA2G6O60733 806 aa17.82■□□□□ 0.44
RNF40-209ENST00000566703 SNAI1O95863 264 aaPredicted RBP17.82■□□□□ 0.44
RNF40-209ENST00000566703 FAM160B2Q86V87 743 aa17.82■□□□□ 0.44
RNF40-209ENST00000566703 OTUD7AQ8TE49 926 aaPredicted RBP17.82■□□□□ 0.44
RNF40-209ENST00000566703 CHURC1Q8WUH1 139 aa17.82■□□□□ 0.44
RNF40-209ENST00000566703 FERMT2Q96AC1 680 aa17.82■□□□□ 0.44
RNF40-209ENST00000566703 GMCL1Q96IK5 515 aa17.82■□□□□ 0.44
RNF40-209ENST00000566703 SALL3Q9BXA9 1300 aa17.81■□□□□ 0.44
RNF40-209ENST00000566703 PGK1P00558 417 aa17.81■□□□□ 0.44
RNF40-209ENST00000566703 LRRC47Q8N1G4 583 aaKnown RBP17.81■□□□□ 0.44
RNF40-209ENST00000566703 KLHDC9Q8NEP7 349 aa17.81■□□□□ 0.44
RNF40-209ENST00000566703 STAG1Q8WVM7 1258 aa17.81■□□□□ 0.44
RNF40-209ENST00000566703 RAVER2Q9HCJ3 691 aaKnown RBP17.81■□□□□ 0.44
RNF40-209ENST00000566703 ADAMTS4O75173 837 aa17.8■□□□□ 0.44
RNF40-209ENST00000566703 DUSP11O75319 330 aaKnown RBP17.8■□□□□ 0.44
RNF40-209ENST00000566703 TLE2Q04725 743 aa17.8■□□□□ 0.44
RNF40-209ENST00000566703 ANKRD45Q5TZF3 282 aa17.8■□□□□ 0.44
RNF40-209ENST00000566703 ANKRD35Q8N283 1001 aa17.8■□□□□ 0.44
RNF40-209ENST00000566703 NUP133Q8WUM0 1156 aa17.8■□□□□ 0.44
RNF40-209ENST00000566703 EVI5LQ96CN4 794 aa17.8■□□□□ 0.44
RNF40-209ENST00000566703 ABHD16BQ9H3Z7 469 aa17.8■□□□□ 0.44
RNF40-209ENST00000566703 PDLIM7Q9NR12 457 aa17.8■□□□□ 0.44
RNF40-209ENST00000566703 RANBP2P49792 3224 aaKnown RBP17.8■□□□□ 0.44
RNF40-209ENST00000566703 COL11A1P12107 1806 aaPredicted RBP17.79■□□□□ 0.44
RNF40-209ENST00000566703 MOXD2PA6NHM9 499 aa17.79■□□□□ 0.44
RNF40-209ENST00000566703 SLC4A3P48751 1232 aa17.79■□□□□ 0.44
RNF40-209ENST00000566703 STAT2P52630 851 aa17.79■□□□□ 0.44
RNF40-209ENST00000566703 RRP1P56182 461 aaKnown RBP17.79■□□□□ 0.44
RNF40-209ENST00000566703 ACVR2BQ13705 512 aa17.79■□□□□ 0.44
RNF40-209ENST00000566703 ALX1Q15699 326 aa17.79■□□□□ 0.44
RNF40-209ENST00000566703 TKFCQ3LXA3 575 aa17.79■□□□□ 0.44
RNF40-209ENST00000566703 Q7L0L9 218 aa17.79■□□□□ 0.44
RNF40-209ENST00000566703 BADQ92934 168 aa17.79■□□□□ 0.44
RNF40-209ENST00000566703 TOX2Q96NM4 488 aa17.79■□□□□ 0.44
RNF40-209ENST00000566703 PRDM5Q9NQX1 630 aaPredicted RBP17.79■□□□□ 0.44
RNF40-209ENST00000566703 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.79■□□□□ 0.44
RNF40-209ENST00000566703 ANAPC4Q9UJX5 808 aa17.79■□□□□ 0.44
RNF40-209ENST00000566703 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.79■□□□□ 0.44
RNF40-209ENST00000566703 SMCHD1A6NHR9 2005 aa17.78■□□□□ 0.44
RNF40-209ENST00000566703 A0A1W2PQ45 241 aaPredicted RBP17.78■□□□□ 0.44
RNF40-209ENST00000566703 A0A1W2PQY0 241 aa17.78■□□□□ 0.44
RNF40-209ENST00000566703 TRIM43BA6NCK2 446 aa17.78■□□□□ 0.44
RNF40-209ENST00000566703 TMEM232C9JQI7 657 aa17.78■□□□□ 0.44
RNF40-209ENST00000566703 KIAA0355O15063 1070 aa17.78■□□□□ 0.44
RNF40-209ENST00000566703 SLC1A4P43007 532 aa17.78■□□□□ 0.44
RNF40-209ENST00000566703 NOVP48745 357 aa17.78■□□□□ 0.44
RNF40-209ENST00000566703 ACLYP53396 1101 aa17.78■□□□□ 0.44
RNF40-209ENST00000566703 HDAC1Q13547 482 aaPredicted RBP17.78■□□□□ 0.44
RNF40-209ENST00000566703 SHHQ15465 462 aa17.78■□□□□ 0.44
RNF40-209ENST00000566703 RCSD1Q6JBY9 416 aa17.78■□□□□ 0.44
RNF40-209ENST00000566703 TRIM43Q96BQ3 446 aaPredicted RBP17.78■□□□□ 0.44
RNF40-209ENST00000566703 HELLSQ9NRZ9 838 aa17.78■□□□□ 0.44
RNF40-209ENST00000566703 TSPY2A6NKD2 308 aa17.77■□□□□ 0.44
RNF40-209ENST00000566703 FOXP2O15409 715 aa17.77■□□□□ 0.44
RNF40-209ENST00000566703 CLTBP09497 229 aa17.77■□□□□ 0.44
RNF40-209ENST00000566703 FGRP09769 529 aa17.77■□□□□ 0.44
RNF40-209ENST00000566703 CST5P28325 142 aaPredicted RBP17.77■□□□□ 0.44
RNF40-209ENST00000566703 AAMPQ13685 434 aa17.77■□□□□ 0.44
RNF40-209ENST00000566703 CCSAPQ6IQ19 270 aaPredicted RBP17.77■□□□□ 0.44
RNF40-209ENST00000566703 ANKRD33Q7Z3H0 272 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms