RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 HDXQ7Z353 690 aa16.03■□□□□ 0.16
CDH1-209ENST00000566510 ADAM21Q9UKJ8 722 aa16.03■□□□□ 0.16
CDH1-209ENST00000566510 EPN1Q9Y6I3 576 aaPredicted RBP16.03■□□□□ 0.16
CDH1-209ENST00000566510 MYH14Q7Z406 1995 aaKnown RBP16.03■□□□□ 0.16
CDH1-209ENST00000566510 BCL9LQ86UU0 1499 aa16.03■□□□□ 0.16
CDH1-209ENST00000566510 PHLPP1O60346 1717 aa16.03■□□□□ 0.16
CDH1-209ENST00000566510 FAM205AQ6ZU69 1335 aa16.03■□□□□ 0.16
CDH1-209ENST00000566510 TTC26A0AVF1 554 aa16.02■□□□□ 0.16
CDH1-209ENST00000566510 POTEB2H3BUK9 544 aa16.02■□□□□ 0.16
CDH1-209ENST00000566510 FGRP09769 529 aa16.02■□□□□ 0.16
CDH1-209ENST00000566510 CALML3P27482 149 aa16.02■□□□□ 0.16
CDH1-209ENST00000566510 LONP1P36776 959 aaKnown RBP16.02■□□□□ 0.16
CDH1-209ENST00000566510 KCNQ4P56696 695 aa16.02■□□□□ 0.16
CDH1-209ENST00000566510 PIP4K2BP78356 416 aa16.02■□□□□ 0.16
CDH1-209ENST00000566510 TRIM14Q14142 442 aa16.02■□□□□ 0.16
CDH1-209ENST00000566510 BEND6Q5SZJ8 279 aaPredicted RBP16.02■□□□□ 0.16
CDH1-209ENST00000566510 SMIM5Q71RC9 77 aa16.02■□□□□ 0.16
CDH1-209ENST00000566510 TRIM47Q96LD4 638 aa16.02■□□□□ 0.16
CDH1-209ENST00000566510 VPS18Q9P253 973 aa16.02■□□□□ 0.16
CDH1-209ENST00000566510 MYO6Q9UM54 1294 aa16.02■□□□□ 0.16
CDH1-209ENST00000566510 TFR2Q9UP52 801 aa16.02■□□□□ 0.16
CDH1-209ENST00000566510 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.02■□□□□ 0.16
CDH1-209ENST00000566510 DOT1LQ8TEK3 1739 aa16.02■□□□□ 0.16
CDH1-209ENST00000566510 USP17L8P0C7I0 530 aa16.02■□□□□ 0.16
CDH1-209ENST00000566510 UBA7P41226 1012 aa16.02■□□□□ 0.16
CDH1-209ENST00000566510 ARHGAP25P42331 645 aa16.02■□□□□ 0.16
CDH1-209ENST00000566510 TFAP4Q01664 338 aa16.02■□□□□ 0.16
CDH1-209ENST00000566510 TUBB2AQ13885 445 aa16.02■□□□□ 0.16
CDH1-209ENST00000566510 STAG2Q8N3U4 1231 aa16.02■□□□□ 0.16
CDH1-209ENST00000566510 CCDC24Q8N4L8 307 aa16.02■□□□□ 0.16
CDH1-209ENST00000566510 TUBB2BQ9BVA1 445 aa16.02■□□□□ 0.16
CDH1-209ENST00000566510 DISC1Q9NRI5 854 aa16.02■□□□□ 0.16
CDH1-209ENST00000566510 LUC7L2Q9Y383 392 aaKnown RBP16.02■□□□□ 0.16
CDH1-209ENST00000566510 H7C1D1 291 aa16.02■□□□□ 0.15
CDH1-209ENST00000566510 ORC4O43929 436 aa16.02■□□□□ 0.15
CDH1-209ENST00000566510 NDUFA10O95299 355 aa16.02■□□□□ 0.15
CDH1-209ENST00000566510 PMS1P54277 932 aaKnown RBP16.02■□□□□ 0.15
CDH1-209ENST00000566510 VSNL1P62760 191 aa16.02■□□□□ 0.15
CDH1-209ENST00000566510 ARL6IP4Q66PJ3 421 aaKnown RBP16.01■□□□□ 0.15
CDH1-209ENST00000566510 HEATR3Q7Z4Q2 680 aa16.01■□□□□ 0.15
CDH1-209ENST00000566510 NOA1Q8NC60 698 aaKnown RBP16.01■□□□□ 0.15
CDH1-209ENST00000566510 OR8K1Q8NGG5 319 aa16.01■□□□□ 0.15
CDH1-209ENST00000566510 MAGEC2Q9UBF1 373 aaPredicted RBP16.01■□□□□ 0.15
CDH1-209ENST00000566510 MAP2K7O14733 419 aa16.01■□□□□ 0.15
CDH1-209ENST00000566510 HIBADHP31937 336 aaKnown RBP16.01■□□□□ 0.15
CDH1-209ENST00000566510 STIM1Q13586 685 aa16.01■□□□□ 0.15
CDH1-209ENST00000566510 WHAMMP3Q1A5X7 153 aa16.01■□□□□ 0.15
CDH1-209ENST00000566510 INF2Q27J81 1249 aa16.01■□□□□ 0.15
CDH1-209ENST00000566510 MB21D1Q8N884 522 aa16.01■□□□□ 0.15
CDH1-209ENST00000566510 PNMA1Q8ND90 353 aa16.01■□□□□ 0.15
CDH1-209ENST00000566510 ATP8A2Q9NTI2 1148 aa16.01■□□□□ 0.15
CDH1-209ENST00000566510 HDAC6Q9UBN7 1215 aa16.01■□□□□ 0.15
CDH1-209ENST00000566510 PCDHA4Q9UN74 947 aa16.01■□□□□ 0.15
CDH1-209ENST00000566510 N4BP1O75113 896 aaKnown RBP16■□□□□ 0.15
CDH1-209ENST00000566510 PHACTR2O75167 634 aa16■□□□□ 0.15
CDH1-209ENST00000566510 EIF3JO75822 258 aaKnown RBP16■□□□□ 0.15
CDH1-209ENST00000566510 ADAMTS2O95450 1211 aa16■□□□□ 0.15
CDH1-209ENST00000566510 RCSD1Q6JBY9 416 aa16■□□□□ 0.15
CDH1-209ENST00000566510 IRF2BP1Q8IU81 584 aa16■□□□□ 0.15
CDH1-209ENST00000566510 ADSSL1Q8N142 457 aa16■□□□□ 0.15
CDH1-209ENST00000566510 MSANTD4Q8NCY6 345 aa16■□□□□ 0.15
CDH1-209ENST00000566510 HNRNPLLQ8WVV9 542 aaKnown RBP16■□□□□ 0.15
CDH1-209ENST00000566510 CCDC102AQ96A19 550 aa16■□□□□ 0.15
CDH1-209ENST00000566510 PCMTD1Q96MG8 357 aaPredicted RBP16■□□□□ 0.15
CDH1-209ENST00000566510 ARPP21Q9UBL0 812 aaPredicted RBP16■□□□□ 0.15
CDH1-209ENST00000566510 FECHP22830 423 aa16■□□□□ 0.15
CDH1-209ENST00000566510 CCDC122Q5T0U0 273 aa16■□□□□ 0.15
CDH1-209ENST00000566510 DZIP1Q86YF9 867 aaKnown RBP16■□□□□ 0.15
CDH1-209ENST00000566510 C4orf32Q8N8J7 132 aa16■□□□□ 0.15
CDH1-209ENST00000566510 CCDC148Q8NFR7 591 aa16■□□□□ 0.15
CDH1-209ENST00000566510 DYNLL2Q96FJ2 89 aa16■□□□□ 0.15
CDH1-209ENST00000566510 MKNK2Q9HBH9 465 aa16■□□□□ 0.15
CDH1-209ENST00000566510 MYO1AQ9UBC5 1043 aa16■□□□□ 0.15
CDH1-209ENST00000566510 RAB21Q9UL25 225 aa16■□□□□ 0.15
CDH1-209ENST00000566510 A0A1B0GUL6 1792 aa16■□□□□ 0.15
CDH1-209ENST00000566510 PSMA7O14818 248 aa15.99■□□□□ 0.15
CDH1-209ENST00000566510 USP5P45974 858 aa15.99■□□□□ 0.15
CDH1-209ENST00000566510 KIAA1328Q86T90 577 aa15.99■□□□□ 0.15
CDH1-209ENST00000566510 CAPZA3Q96KX2 299 aa15.99■□□□□ 0.15
CDH1-209ENST00000566510 TMEM60Q9H2L4 133 aa15.99■□□□□ 0.15
CDH1-209ENST00000566510 B4DLN1 442 aa15.99■□□□□ 0.15
CDH1-209ENST00000566510 TRIM21P19474 475 aaKnown RBP15.99■□□□□ 0.15
CDH1-209ENST00000566510 TYW1BQ6NUM6 668 aa15.99■□□□□ 0.15
CDH1-209ENST00000566510 FBXO33Q7Z6M2 555 aa15.99■□□□□ 0.15
CDH1-209ENST00000566510 L1RE1Q9UN81 338 aa15.99■□□□□ 0.15
CDH1-209ENST00000566510 STX8Q9UNK0 236 aa15.99■□□□□ 0.15
CDH1-209ENST00000566510 REXO2Q9Y3B8 237 aaKnown RBP15.99■□□□□ 0.15
CDH1-209ENST00000566510 USP17L3A6NCW0 530 aa15.98■□□□□ 0.15
CDH1-209ENST00000566510 USP17L4A6NCW7 530 aa15.98■□□□□ 0.15
CDH1-209ENST00000566510 KCNQ2O43526 872 aa15.98■□□□□ 0.15
CDH1-209ENST00000566510 SRGAP2O75044 1071 aa15.98■□□□□ 0.15
CDH1-209ENST00000566510 TUBB4BP68371 445 aa15.98■□□□□ 0.15
CDH1-209ENST00000566510 SF3B3Q15393 1217 aaKnown RBP15.98■□□□□ 0.15
CDH1-209ENST00000566510 ZSCAN26Q16670 478 aa15.98■□□□□ 0.15
CDH1-209ENST00000566510 NAALADL2Q58DX5 795 aa15.98■□□□□ 0.15
CDH1-209ENST00000566510 USP17L1Q7RTZ2 530 aa15.98■□□□□ 0.15
CDH1-209ENST00000566510 LGALS16A8MUM7 142 aa15.98■□□□□ 0.15
CDH1-209ENST00000566510 RPS8P62241 208 aaKnown RBP15.98■□□□□ 0.15
CDH1-209ENST00000566510 HSP90B2PQ58FF3 399 aa15.98■□□□□ 0.15
CDH1-209ENST00000566510 CSGALNACT2Q8N6G5 542 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms