RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 TSPY8P0CW00 308 aa19.34■□□□□ 0.69
RAB40C-210ENST00000566290 PLCD1P51178 756 aa19.34■□□□□ 0.69
RAB40C-210ENST00000566290 AKAP17AQ02040 695 aaKnown RBP19.34■□□□□ 0.69
RAB40C-210ENST00000566290 TCP10Q12799 353 aa19.34■□□□□ 0.69
RAB40C-210ENST00000566290 SPRYD7Q5W111 196 aa19.34■□□□□ 0.69
RAB40C-210ENST00000566290 NOSTRINQ8IVI9 506 aa19.34■□□□□ 0.69
RAB40C-210ENST00000566290 NUP133Q8WUM0 1156 aa19.34■□□□□ 0.69
RAB40C-210ENST00000566290 FUCA2Q9BTY2 467 aa19.34■□□□□ 0.69
RAB40C-210ENST00000566290 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.34■□□□□ 0.69
RAB40C-210ENST00000566290 OSBPL5Q9H0X9 879 aaPredicted RBP19.34■□□□□ 0.69
RAB40C-210ENST00000566290 TSPY26PQ9H489 355 aa19.34■□□□□ 0.69
RAB40C-210ENST00000566290 CLSTN2Q9H4D0 955 aa19.34■□□□□ 0.69
RAB40C-210ENST00000566290 SH3GLB2Q9NR46 395 aa19.34■□□□□ 0.69
RAB40C-210ENST00000566290 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.34■□□□□ 0.69
RAB40C-210ENST00000566290 CUL9Q8IWT3 2517 aa19.34■□□□□ 0.69
RAB40C-210ENST00000566290 ATRNL1Q5VV63 1379 aa19.33■□□□□ 0.69
RAB40C-210ENST00000566290 FAM237AA0A1B0GTK4 181 aa19.33■□□□□ 0.68
RAB40C-210ENST00000566290 ALDH1A1P00352 501 aa19.33■□□□□ 0.68
RAB40C-210ENST00000566290 TNNI2P48788 182 aa19.33■□□□□ 0.68
RAB40C-210ENST00000566290 CAP1Q01518 475 aa19.33■□□□□ 0.68
RAB40C-210ENST00000566290 GUCY1B3Q02153 619 aa19.33■□□□□ 0.68
RAB40C-210ENST00000566290 SLC39A14Q15043 492 aa19.33■□□□□ 0.68
RAB40C-210ENST00000566290 PKN1Q16512 942 aa19.33■□□□□ 0.68
RAB40C-210ENST00000566290 RILPL1Q5EBL4 403 aa19.33■□□□□ 0.68
RAB40C-210ENST00000566290 FKBP1CQ5VVH2 108 aa19.33■□□□□ 0.68
RAB40C-210ENST00000566290 ANO1Q5XXA6 986 aa19.33■□□□□ 0.68
RAB40C-210ENST00000566290 FAM83AQ86UY5 434 aa19.33■□□□□ 0.68
RAB40C-210ENST00000566290 IFNL1Q8IU54 200 aa19.33■□□□□ 0.68
RAB40C-210ENST00000566290 CCDC144CPQ8IYA2 1237 aa19.33■□□□□ 0.68
RAB40C-210ENST00000566290 PNMA1Q8ND90 353 aa19.33■□□□□ 0.68
RAB40C-210ENST00000566290 CD99L2Q8TCZ2 262 aa19.33■□□□□ 0.68
RAB40C-210ENST00000566290 NUP62CLQ9H1M0 184 aa19.33■□□□□ 0.68
RAB40C-210ENST00000566290 TMOD2Q9NZR1 351 aa19.33■□□□□ 0.68
RAB40C-210ENST00000566290 SIPA1L1O43166 1804 aa19.32■□□□□ 0.68
RAB40C-210ENST00000566290 IGKV6D-41A0A0C4DH26 115 aa19.32■□□□□ 0.68
RAB40C-210ENST00000566290 PPP1R12BO60237 982 aaPredicted RBP19.32■□□□□ 0.68
RAB40C-210ENST00000566290 EVX2Q03828 476 aa19.32■□□□□ 0.68
RAB40C-210ENST00000566290 UVSSAQ2YD98 709 aa19.32■□□□□ 0.68
RAB40C-210ENST00000566290 FAM47AQ5JRC9 791 aa19.32■□□□□ 0.68
RAB40C-210ENST00000566290 DYNLL2Q96FJ2 89 aa19.32■□□□□ 0.68
RAB40C-210ENST00000566290 AIFM3Q96NN9 605 aa19.32■□□□□ 0.68
RAB40C-210ENST00000566290 PHF20Q9BVI0 1012 aa19.32■□□□□ 0.68
RAB40C-210ENST00000566290 OTOFQ9HC10 1997 aa19.32■□□□□ 0.68
RAB40C-210ENST00000566290 IGF2BP3O00425 579 aaKnown RBP eCLIP19.31■□□□□ 0.68
RAB40C-210ENST00000566290 SPTLC2O15270 562 aa19.31■□□□□ 0.68
RAB40C-210ENST00000566290 CAVIN2O95810 425 aa19.31■□□□□ 0.68
RAB40C-210ENST00000566290 HLA-DOAP06340 250 aa19.31■□□□□ 0.68
RAB40C-210ENST00000566290 FAM160A1Q05DH4 1040 aa19.31■□□□□ 0.68
RAB40C-210ENST00000566290 OTUD7BQ6GQQ9 843 aa19.31■□□□□ 0.68
RAB40C-210ENST00000566290 CHRDL2Q6WN34 429 aa19.31■□□□□ 0.68
RAB40C-210ENST00000566290 METTL16Q86W50 562 aaKnown RBP19.31■□□□□ 0.68
RAB40C-210ENST00000566290 DIS3L2Q8IYB7 885 aaKnown RBP19.31■□□□□ 0.68
RAB40C-210ENST00000566290 ENGASEQ8NFI3 743 aa19.31■□□□□ 0.68
RAB40C-210ENST00000566290 FAM151AQ8WW52 585 aa19.31■□□□□ 0.68
RAB40C-210ENST00000566290 CCDC17Q96LX7 622 aa19.31■□□□□ 0.68
RAB40C-210ENST00000566290 TMEM106CQ9BVX2 250 aa19.31■□□□□ 0.68
RAB40C-210ENST00000566290 SPZ1Q9BXG8 430 aa19.31■□□□□ 0.68
RAB40C-210ENST00000566290 DDX4Q9NQI0 724 aaKnown RBP19.31■□□□□ 0.68
RAB40C-210ENST00000566290 SERPINB13Q9UIV8 391 aa19.31■□□□□ 0.68
RAB40C-210ENST00000566290 A0A0C4DFX4 3053 aa19.31■□□□□ 0.68
RAB40C-210ENST00000566290 PALM3A6NDB9 673 aaPredicted RBP19.3■□□□□ 0.68
RAB40C-210ENST00000566290 BMP15O95972 392 aa19.3■□□□□ 0.68
RAB40C-210ENST00000566290 SLURP2P0DP57 97 aa19.3■□□□□ 0.68
RAB40C-210ENST00000566290 TOP1P11387 765 aaKnown RBP19.3■□□□□ 0.68
RAB40C-210ENST00000566290 LIG1P18858 919 aa19.3■□□□□ 0.68
RAB40C-210ENST00000566290 STK38Q15208 465 aa19.3■□□□□ 0.68
RAB40C-210ENST00000566290 PFKFB3Q16875 520 aaPredicted RBP19.3■□□□□ 0.68
RAB40C-210ENST00000566290 GALNT17Q6IS24 598 aa19.3■□□□□ 0.68
RAB40C-210ENST00000566290 CCDC73Q6ZRK6 1079 aa19.3■□□□□ 0.68
RAB40C-210ENST00000566290 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.3■□□□□ 0.68
RAB40C-210ENST00000566290 SH3BP5LQ7L8J4 393 aa19.3■□□□□ 0.68
RAB40C-210ENST00000566290 STK11IPQ8N1F8 1099 aa19.3■□□□□ 0.68
RAB40C-210ENST00000566290 BICD2Q8TD16 824 aa19.3■□□□□ 0.68
RAB40C-210ENST00000566290 MRPS27Q92552 414 aaKnown RBP19.3■□□□□ 0.68
RAB40C-210ENST00000566290 ERO1AQ96HE7 468 aa19.3■□□□□ 0.68
RAB40C-210ENST00000566290 hCG_1984214I3L0E3 225 aa19.29■□□□□ 0.68
RAB40C-210ENST00000566290 NMT2O60551 498 aa19.29■□□□□ 0.68
RAB40C-210ENST00000566290 ENTPD3O75355 529 aa19.29■□□□□ 0.68
RAB40C-210ENST00000566290 PLEKHA8P1O95397 391 aa19.29■□□□□ 0.68
RAB40C-210ENST00000566290 SCG2P13521 617 aa19.29■□□□□ 0.68
RAB40C-210ENST00000566290 GUCY1A2P33402 732 aa19.29■□□□□ 0.68
RAB40C-210ENST00000566290 GJA5P36382 358 aa19.29■□□□□ 0.68
RAB40C-210ENST00000566290 IREB2P48200 963 aaKnown RBP19.29■□□□□ 0.68
RAB40C-210ENST00000566290 PTPAQ15257 358 aa19.29■□□□□ 0.68
RAB40C-210ENST00000566290 MIGA2Q7L4E1 593 aa19.29■□□□□ 0.68
RAB40C-210ENST00000566290 ZNF713Q8N859 430 aaPredicted RBP19.29■□□□□ 0.68
RAB40C-210ENST00000566290 ZNF333Q96JL9 665 aa19.29■□□□□ 0.68
RAB40C-210ENST00000566290 PPP1R9BQ96SB3 815 aa19.29■□□□□ 0.68
RAB40C-210ENST00000566290 TMEM47Q9BQJ4 181 aa19.29■□□□□ 0.68
RAB40C-210ENST00000566290 EFCC1Q9HA90 598 aa19.29■□□□□ 0.68
RAB40C-210ENST00000566290 BRMS1Q9HCU9 246 aa19.29■□□□□ 0.68
RAB40C-210ENST00000566290 DACT1Q9NYF0 836 aa19.29■□□□□ 0.68
RAB40C-210ENST00000566290 SAP30BPQ9UHR5 308 aaKnown RBP19.29■□□□□ 0.68
RAB40C-210ENST00000566290 MANSC4A6NHS7 340 aaPredicted RBP19.28■□□□□ 0.68
RAB40C-210ENST00000566290 CMA1P23946 247 aa19.28■□□□□ 0.68
RAB40C-210ENST00000566290 CALML3P27482 149 aa19.28■□□□□ 0.68
RAB40C-210ENST00000566290 TRAPPC10P48553 1259 aa19.28■□□□□ 0.68
RAB40C-210ENST00000566290 FOSBP53539 338 aa19.28■□□□□ 0.68
RAB40C-210ENST00000566290 INHBEP58166 350 aa19.28■□□□□ 0.68
RAB40C-210ENST00000566290 CCDC173Q0VFZ6 552 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms