RNA–Protein interactions for RNA: ENST00000566087.5

NSMCE1-211, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-211ENST00000566087 ORC4O43929 436 aa12.6□□□□□ -0.39
NSMCE1-211ENST00000566087 RANBP6O60518 1105 aaKnown RBP12.6□□□□□ -0.39
NSMCE1-211ENST00000566087 PRDM1O75626 825 aa12.6□□□□□ -0.39
NSMCE1-211ENST00000566087 FLOT1O75955 427 aa12.6□□□□□ -0.39
NSMCE1-211ENST00000566087 GSPT1P15170 499 aaKnown RBP12.6□□□□□ -0.39
NSMCE1-211ENST00000566087 ATN1P54259 1190 aaPredicted RBP12.6□□□□□ -0.39
NSMCE1-211ENST00000566087 IMMTQ16891 758 aaKnown RBP12.6□□□□□ -0.39
NSMCE1-211ENST00000566087 WDR78Q5VTH9 848 aa12.6□□□□□ -0.39
NSMCE1-211ENST00000566087 KIAA1211Q6ZU35 1233 aa12.6□□□□□ -0.39
NSMCE1-211ENST00000566087 APBA2Q99767 749 aa12.6□□□□□ -0.39
NSMCE1-211ENST00000566087 MTMR4Q9NYA4 1195 aa12.6□□□□□ -0.39
NSMCE1-211ENST00000566087 FLRT1Q9NZU1 646 aa12.6□□□□□ -0.39
NSMCE1-211ENST00000566087 IVNS1ABPQ9Y6Y0 642 aa12.6□□□□□ -0.39
NSMCE1-211ENST00000566087 CUL9Q8IWT3 2517 aa12.6□□□□□ -0.39
NSMCE1-211ENST00000566087 F5H6K3 240 aa12.59□□□□□ -0.39
NSMCE1-211ENST00000566087 POTEB2H3BUK9 544 aa12.59□□□□□ -0.39
NSMCE1-211ENST00000566087 STRNO43815 780 aa12.59□□□□□ -0.39
NSMCE1-211ENST00000566087 CNMDO75829 334 aa12.59□□□□□ -0.39
NSMCE1-211ENST00000566087 FDX1P10109 184 aa12.59□□□□□ -0.39
NSMCE1-211ENST00000566087 COPB2P35606 906 aa12.59□□□□□ -0.39
NSMCE1-211ENST00000566087 EVX2Q03828 476 aa12.59□□□□□ -0.39
NSMCE1-211ENST00000566087 CTDSPL2Q05D32 466 aa12.59□□□□□ -0.39
NSMCE1-211ENST00000566087 KLRC3Q07444 240 aa12.59□□□□□ -0.39
NSMCE1-211ENST00000566087 AKNAD1Q5T1N1 836 aa12.59□□□□□ -0.39
NSMCE1-211ENST00000566087 VPS53Q5VIR6 699 aa12.59□□□□□ -0.39
NSMCE1-211ENST00000566087 SIAH1Q8IUQ4 282 aa12.59□□□□□ -0.39
NSMCE1-211ENST00000566087 ESR2Q92731 530 aa12.59□□□□□ -0.39
NSMCE1-211ENST00000566087 TTC14Q96N46 770 aa12.59□□□□□ -0.39
NSMCE1-211ENST00000566087 CNNM2Q9H8M5 875 aa12.59□□□□□ -0.39
NSMCE1-211ENST00000566087 SLC5A4Q9NY91 659 aa12.59□□□□□ -0.39
NSMCE1-211ENST00000566087 EIF5BO60841 1220 aaKnown RBP12.58□□□□□ -0.4
NSMCE1-211ENST00000566087 FGRP09769 529 aa12.58□□□□□ -0.4
NSMCE1-211ENST00000566087 CNGA1P29973 690 aa12.58□□□□□ -0.4
NSMCE1-211ENST00000566087 TRDNQ13061 729 aa12.58□□□□□ -0.4
NSMCE1-211ENST00000566087 MAP2K5Q13163 448 aa12.58□□□□□ -0.4
NSMCE1-211ENST00000566087 IQCA1Q86XH1 822 aa12.58□□□□□ -0.4
NSMCE1-211ENST00000566087 SPICE1Q8N0Z3 855 aa12.58□□□□□ -0.4
NSMCE1-211ENST00000566087 PRPF38AQ8NAV1 312 aaKnown RBP12.58□□□□□ -0.4
NSMCE1-211ENST00000566087 CHURC1Q8WUH1 139 aa12.58□□□□□ -0.4
NSMCE1-211ENST00000566087 CEP95Q96GE4 821 aa12.58□□□□□ -0.4
NSMCE1-211ENST00000566087 LBHD1Q9BQE6 289 aaPredicted RBP12.58□□□□□ -0.4
NSMCE1-211ENST00000566087 KRT23Q9C075 422 aa12.58□□□□□ -0.4
NSMCE1-211ENST00000566087 TCP11L1Q9NUJ3 509 aa12.58□□□□□ -0.4
NSMCE1-211ENST00000566087 STX8Q9UNK0 236 aa12.58□□□□□ -0.4
NSMCE1-211ENST00000566087 LTBP2Q14767 1821 aa12.58□□□□□ -0.4
NSMCE1-211ENST00000566087 IGKV6D-41A0A0C4DH26 115 aa12.57□□□□□ -0.4
NSMCE1-211ENST00000566087 ABCB7O75027 752 aa12.57□□□□□ -0.4
NSMCE1-211ENST00000566087 ZBED4O75132 1171 aa12.57□□□□□ -0.4
NSMCE1-211ENST00000566087 CDC45O75419 566 aa12.57□□□□□ -0.4
NSMCE1-211ENST00000566087 SLC25A27O95847 323 aa12.57□□□□□ -0.4
NSMCE1-211ENST00000566087 CHMLP26374 656 aa12.57□□□□□ -0.4
NSMCE1-211ENST00000566087 FAM47AQ5JRC9 791 aa12.57□□□□□ -0.4
NSMCE1-211ENST00000566087 RRP12Q5JTH9 1297 aaKnown RBP12.57□□□□□ -0.4
NSMCE1-211ENST00000566087 ZNF589Q86UQ0 364 aaPredicted RBP12.57□□□□□ -0.4
NSMCE1-211ENST00000566087 GMCL1P1Q8NEA9 526 aa12.57□□□□□ -0.4
NSMCE1-211ENST00000566087 STAG1Q8WVM7 1258 aa12.57□□□□□ -0.4
NSMCE1-211ENST00000566087 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.57□□□□□ -0.4
NSMCE1-211ENST00000566087 MROH8Q9H579 483 aa12.57□□□□□ -0.4
NSMCE1-211ENST00000566087 FEM1BQ9UK73 627 aa12.57□□□□□ -0.4
NSMCE1-211ENST00000566087 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.57□□□□□ -0.4
NSMCE1-211ENST00000566087 SPTBN5Q9NRC6 3674 aaKnown RBP12.57□□□□□ -0.4
NSMCE1-211ENST00000566087 PLIN4Q96Q06 1357 aa12.56□□□□□ -0.4
NSMCE1-211ENST00000566087 SPDYE16A6NNV3 312 aaPredicted RBP12.56□□□□□ -0.4
NSMCE1-211ENST00000566087 SMIM22K7EJ46 135 aa12.56□□□□□ -0.4
NSMCE1-211ENST00000566087 BMP3P12645 472 aa12.56□□□□□ -0.4
NSMCE1-211ENST00000566087 CYP2C19P33261 490 aa12.56□□□□□ -0.4
NSMCE1-211ENST00000566087 RTP1P59025 263 aa12.56□□□□□ -0.4
NSMCE1-211ENST00000566087 PLS1Q14651 629 aa12.56□□□□□ -0.4
NSMCE1-211ENST00000566087 MFSD14CQ5VZR4 134 aa12.56□□□□□ -0.4
NSMCE1-211ENST00000566087 ANO1Q5XXA6 986 aa12.56□□□□□ -0.4
NSMCE1-211ENST00000566087 RCSD1Q6JBY9 416 aa12.56□□□□□ -0.4
NSMCE1-211ENST00000566087 SHCBP1Q8NEM2 672 aa12.56□□□□□ -0.4
NSMCE1-211ENST00000566087 TRPV1Q8NER1 839 aa12.56□□□□□ -0.4
NSMCE1-211ENST00000566087 NPLOC4Q8TAT6 608 aa12.56□□□□□ -0.4
NSMCE1-211ENST00000566087 DDX20Q9UHI6 824 aaKnown RBP12.56□□□□□ -0.4
NSMCE1-211ENST00000566087 CDH23Q9H251 3354 aa12.55□□□□□ -0.4
NSMCE1-211ENST00000566087 SLC15A5A6NIM6 579 aa12.55□□□□□ -0.4
NSMCE1-211ENST00000566087 FOXP2O15409 715 aa12.55□□□□□ -0.4
NSMCE1-211ENST00000566087 TOP1P11387 765 aaKnown RBP12.55□□□□□ -0.4
NSMCE1-211ENST00000566087 PTPREP23469 700 aa12.55□□□□□ -0.4
NSMCE1-211ENST00000566087 SLC1A4P43007 532 aa12.55□□□□□ -0.4
NSMCE1-211ENST00000566087 HAND2P61296 217 aa12.55□□□□□ -0.4
NSMCE1-211ENST00000566087 FAM83BQ5T0W9 1011 aa12.55□□□□□ -0.4
NSMCE1-211ENST00000566087 GJC2Q5T442 439 aaPredicted RBP12.55□□□□□ -0.4
NSMCE1-211ENST00000566087 ZNF697Q5TEC3 545 aa12.55□□□□□ -0.4
NSMCE1-211ENST00000566087 SLFN13Q68D06 897 aa12.55□□□□□ -0.4
NSMCE1-211ENST00000566087 FAM109BQ6ICB4 259 aaPredicted RBP12.55□□□□□ -0.4
NSMCE1-211ENST00000566087 FAM160B2Q86V87 743 aa12.55□□□□□ -0.4
NSMCE1-211ENST00000566087 GMCL1Q96IK5 515 aa12.55□□□□□ -0.4
NSMCE1-211ENST00000566087 CDX2Q99626 313 aaPredicted RBP12.55□□□□□ -0.4
NSMCE1-211ENST00000566087 SLF1Q9BQI6 1058 aa12.55□□□□□ -0.4
NSMCE1-211ENST00000566087 SPATC1LQ9H0A9 340 aa12.55□□□□□ -0.4
NSMCE1-211ENST00000566087 BTBD7Q9P203 1132 aa12.55□□□□□ -0.4
NSMCE1-211ENST00000566087 PNMA2Q9UL42 364 aa12.55□□□□□ -0.4
NSMCE1-211ENST00000566087 ISY1Q9ULR0 285 aaKnown RBP12.55□□□□□ -0.4
NSMCE1-211ENST00000566087 ATP11BQ9Y2G3 1177 aa12.55□□□□□ -0.4
NSMCE1-211ENST00000566087 PRUNE2Q8WUY3 3088 aa12.55□□□□□ -0.4
NSMCE1-211ENST00000566087 NDUFB10O96000 172 aa12.54□□□□□ -0.4
NSMCE1-211ENST00000566087 IKQ13123 557 aaPredicted RBP12.54□□□□□ -0.4
NSMCE1-211ENST00000566087 SHHQ15465 462 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms