RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 OAZ1P54368 228 aa24.66■■□□□ 1.54
SHCBP1-205ENST00000566016 CHST3Q7LGC8 479 aa24.66■■□□□ 1.54
SHCBP1-205ENST00000566016 MOV10L1Q9BXT6 1211 aaKnown RBP24.66■■□□□ 1.54
SHCBP1-205ENST00000566016 ISY1Q9ULR0 285 aaKnown RBP24.66■■□□□ 1.54
SHCBP1-205ENST00000566016 MTMR7Q9Y216 660 aa24.66■■□□□ 1.54
SHCBP1-205ENST00000566016 SNX14Q9Y5W7 946 aa24.66■■□□□ 1.54
SHCBP1-205ENST00000566016 MYH6P13533 1939 aa24.65■■□□□ 1.54
SHCBP1-205ENST00000566016 COPB2P35606 906 aa24.65■■□□□ 1.54
SHCBP1-205ENST00000566016 IKQ13123 557 aaPredicted RBP24.65■■□□□ 1.54
SHCBP1-205ENST00000566016 ADCK5Q3MIX3 580 aa24.65■■□□□ 1.54
SHCBP1-205ENST00000566016 ASPRV1Q53RT3 343 aa24.65■■□□□ 1.54
SHCBP1-205ENST00000566016 SAMD1Q6SPF0 538 aaPredicted RBP24.65■■□□□ 1.54
SHCBP1-205ENST00000566016 CCAR1Q8IX12 1150 aaKnown RBP24.65■■□□□ 1.54
SHCBP1-205ENST00000566016 TMTC2Q8N394 836 aa24.65■■□□□ 1.54
SHCBP1-205ENST00000566016 TEX13BQ9BXU2 312 aa24.65■■□□□ 1.54
SHCBP1-205ENST00000566016 LY9Q9HBG7 655 aa24.65■■□□□ 1.54
SHCBP1-205ENST00000566016 ZBED4O75132 1171 aa24.64■■□□□ 1.54
SHCBP1-205ENST00000566016 SLC25A27O95847 323 aa24.64■■□□□ 1.54
SHCBP1-205ENST00000566016 LIFRP42702 1097 aa24.64■■□□□ 1.54
SHCBP1-205ENST00000566016 COL9A3Q14050 684 aaPredicted RBP24.64■■□□□ 1.54
SHCBP1-205ENST00000566016 DHX32Q7L7V1 743 aaKnown RBP24.64■■□□□ 1.54
SHCBP1-205ENST00000566016 GPR142Q7Z601 462 aa24.64■■□□□ 1.54
SHCBP1-205ENST00000566016 SOCS4Q8WXH5 440 aa24.64■■□□□ 1.54
SHCBP1-205ENST00000566016 MROH8Q9H579 483 aa24.64■■□□□ 1.54
SHCBP1-205ENST00000566016 PRR12Q9ULL5 1215 aa24.64■■□□□ 1.54
SHCBP1-205ENST00000566016 ZNFX1Q9P2E3 1918 aaKnown RBP24.64■■□□□ 1.54
SHCBP1-205ENST00000566016 SH2B2O14492 632 aaPredicted RBP24.64■■□□□ 1.53
SHCBP1-205ENST00000566016 PRKCZQ05513 592 aa24.64■■□□□ 1.53
SHCBP1-205ENST00000566016 IRF5Q13568 498 aa24.64■■□□□ 1.53
SHCBP1-205ENST00000566016 RIOX2Q8IUF8 465 aa24.64■■□□□ 1.53
SHCBP1-205ENST00000566016 FRMPD2Q68DX3 1309 aaPredicted RBP24.63■■□□□ 1.53
SHCBP1-205ENST00000566016 STAT3P40763 770 aa24.63■■□□□ 1.53
SHCBP1-205ENST00000566016 EXOSC10Q01780 885 aaKnown RBP24.63■■□□□ 1.53
SHCBP1-205ENST00000566016 PLS1Q14651 629 aa24.63■■□□□ 1.53
SHCBP1-205ENST00000566016 PLEKHH3Q7Z736 793 aa24.63■■□□□ 1.53
SHCBP1-205ENST00000566016 ECM2O94769 699 aaPredicted RBP24.62■■□□□ 1.53
SHCBP1-205ENST00000566016 PARP1P09874 1014 aaKnown RBP24.62■■□□□ 1.53
SHCBP1-205ENST00000566016 TROAPQ12815 778 aa24.62■■□□□ 1.53
SHCBP1-205ENST00000566016 SYDE2Q5VT97 1194 aa24.62■■□□□ 1.53
SHCBP1-205ENST00000566016 CATIPQ7Z7H3 387 aa24.62■■□□□ 1.53
SHCBP1-205ENST00000566016 SGMS1Q86VZ5 419 aa24.62■■□□□ 1.53
SHCBP1-205ENST00000566016 CHMP4CQ96CF2 233 aa24.62■■□□□ 1.53
SHCBP1-205ENST00000566016 MAP3K14Q99558 947 aa24.62■■□□□ 1.53
SHCBP1-205ENST00000566016 SENP2Q9HC62 589 aa24.62■■□□□ 1.53
SHCBP1-205ENST00000566016 GJD2Q9UKL4 321 aa24.62■■□□□ 1.53
SHCBP1-205ENST00000566016 CTDP1Q9Y5B0 961 aaPredicted RBP24.62■■□□□ 1.53
SHCBP1-205ENST00000566016 PTCH2Q9Y6C5 1203 aa24.62■■□□□ 1.53
SHCBP1-205ENST00000566016 STRNO43815 780 aa24.61■■□□□ 1.53
SHCBP1-205ENST00000566016 ERCC3P19447 782 aa24.61■■□□□ 1.53
SHCBP1-205ENST00000566016 FLT3LGP49771 235 aa24.61■■□□□ 1.53
SHCBP1-205ENST00000566016 C8orf34Q49A92 452 aa24.61■■□□□ 1.53
SHCBP1-205ENST00000566016 TTBK2Q6IQ55 1244 aa24.61■■□□□ 1.53
SHCBP1-205ENST00000566016 RANBP17Q9H2T7 1088 aaKnown RBP24.61■■□□□ 1.53
SHCBP1-205ENST00000566016 GPCPD1Q9NPB8 672 aa24.61■■□□□ 1.53
SHCBP1-205ENST00000566016 IVNS1ABPQ9Y6Y0 642 aa24.61■■□□□ 1.53
SHCBP1-205ENST00000566016 SMCHD1A6NHR9 2005 aa24.61■■□□□ 1.53
SHCBP1-205ENST00000566016 DDAH1O94760 285 aa24.6■■□□□ 1.53
SHCBP1-205ENST00000566016 PSMA5P28066 241 aa24.6■■□□□ 1.53
SHCBP1-205ENST00000566016 GRB14Q14449 540 aa24.6■■□□□ 1.53
SHCBP1-205ENST00000566016 MORN1Q5T089 497 aa24.6■■□□□ 1.53
SHCBP1-205ENST00000566016 SNRNP48Q6IEG0 339 aaKnown RBP24.6■■□□□ 1.53
SHCBP1-205ENST00000566016 ABRAQ8N0Z2 381 aa24.6■■□□□ 1.53
SHCBP1-205ENST00000566016 RAET1EQ8TD07 263 aa24.6■■□□□ 1.53
SHCBP1-205ENST00000566016 JAKMIP1Q96N16 626 aaKnown RBP24.6■■□□□ 1.53
SHCBP1-205ENST00000566016 NUDT12Q9BQG2 462 aa24.6■■□□□ 1.53
SHCBP1-205ENST00000566016 CWC22Q9HCG8 908 aaKnown RBP24.6■■□□□ 1.53
SHCBP1-205ENST00000566016 GABRQQ9UN88 632 aa24.6■■□□□ 1.53
SHCBP1-205ENST00000566016 HPS5Q9UPZ3 1129 aa24.6■■□□□ 1.53
SHCBP1-205ENST00000566016 ZNF536O15090 1300 aa24.6■■□□□ 1.53
SHCBP1-205ENST00000566016 SLC15A5A6NIM6 579 aa24.59■■□□□ 1.53
SHCBP1-205ENST00000566016 XRCC5P13010 732 aaKnown RBP24.59■■□□□ 1.53
SHCBP1-205ENST00000566016 SLC16A2P36021 539 aa24.59■■□□□ 1.53
SHCBP1-205ENST00000566016 GRM4Q14833 912 aa24.59■■□□□ 1.53
SHCBP1-205ENST00000566016 BLOC1S2Q6QNY1 142 aa24.59■■□□□ 1.53
SHCBP1-205ENST00000566016 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.59■■□□□ 1.53
SHCBP1-205ENST00000566016 USP6NLQ92738 828 aa24.59■■□□□ 1.53
SHCBP1-205ENST00000566016 PNMA2Q9UL42 364 aa24.59■■□□□ 1.53
SHCBP1-205ENST00000566016 PLXNA1Q9UIW2 1896 aa24.59■■□□□ 1.53
SHCBP1-205ENST00000566016 PALM3A6NDB9 673 aaPredicted RBP24.58■■□□□ 1.53
SHCBP1-205ENST00000566016 GOLGA8HP0CJ92 632 aa24.58■■□□□ 1.53
SHCBP1-205ENST00000566016 PTPREP23469 700 aa24.58■■□□□ 1.53
SHCBP1-205ENST00000566016 ANAPC15P60006 121 aa24.58■■□□□ 1.53
SHCBP1-205ENST00000566016 NCAPG2Q86XI2 1143 aa24.58■■□□□ 1.53
SHCBP1-205ENST00000566016 ZNF654Q8IZM8 581 aa24.58■■□□□ 1.53
SHCBP1-205ENST00000566016 FBXL16Q8N461 479 aa24.58■■□□□ 1.53
SHCBP1-205ENST00000566016 PXYLP1Q8TE99 480 aa24.58■■□□□ 1.53
SHCBP1-205ENST00000566016 ABHD8Q96I13 439 aa24.58■■□□□ 1.53
SHCBP1-205ENST00000566016 TM6SF1Q9BZW5 370 aa24.58■■□□□ 1.53
SHCBP1-205ENST00000566016 GPHNQ9NQX3 736 aaPredicted RBP24.58■■□□□ 1.53
SHCBP1-205ENST00000566016 MAD2L2Q9UI95 211 aa24.58■■□□□ 1.53
SHCBP1-205ENST00000566016 BAZ2BQ9UIF8 2168 aaKnown RBP24.58■■□□□ 1.53
SHCBP1-205ENST00000566016 WDR78Q5VTH9 848 aa24.58■■□□□ 1.52
SHCBP1-205ENST00000566016 CPXCR1Q8N123 301 aa24.58■■□□□ 1.52
SHCBP1-205ENST00000566016 SLAIN1Q8ND83 568 aa24.58■■□□□ 1.52
SHCBP1-205ENST00000566016 ARMC5Q96C12 935 aa24.58■■□□□ 1.52
SHCBP1-205ENST00000566016 RAVER2Q9HCJ3 691 aaKnown RBP24.58■■□□□ 1.52
SHCBP1-205ENST00000566016 CCDC69A6NI79 296 aa24.57■■□□□ 1.52
SHCBP1-205ENST00000566016 ICAM1P05362 532 aa24.57■■□□□ 1.52
SHCBP1-205ENST00000566016 CALM1P0DP23 149 aa24.57■■□□□ 1.52
SHCBP1-205ENST00000566016 CALM2P0DP24 149 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms